FFCP PHASE1:Mm9::chr2:35992098..35992117,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67889|HGNC=|UniProt=B0R043|association_with_transcript=13bp_to_ENSMUST00000122456,ENSMUST00000142809_5end|description=CAGE_peak_2_at_Rbm18_5end|id=chr2:35992098..35992117,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.53e-09!94;UBERON:0000033!1.64e-07!63;UBERON:0007811!4.43e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.29e-08,92|phase1_expression=16.1750335575842,3.14077866875425,4.54999239389536,2.11724947914781,2.00358291978539,4.53274034162102,4.67225281191051,15.236552166106,19.006477490475,19.1932911584035,14.7247452673934,14.8376215731326,14.0384598543589,14.5992072039726,5.3297561890506,6.2767332890846,4.19737126876888,10.4102514568218,9.32378148519024,11.0341309467488,10.2051948181284,8.53902180327614,9.66439219814061,4.31979541542198,3.67054849707472,3.44539178469012,2.15380998079537,2.37018355954478,4.56056206695297,3.2763916868791,4.21287970245079,2.54012269383853,4.92051830067656,0,4.33277429626912,4.82080471539628,4.08338712524738,21.7636447983192,13.2827008569046,22.5115209908733,25.8821854733646,21.1744100337118,31.558172947025,9.81995180209503,10.44182391561,9.54443111240744,0.782391344348039,1.52617609466313,1.31811709640683,3.30530828426282,2.37976916763116,1.43752564364972,20.1339127269284,14.5072428402269,10.7550015725588,9.26133969729409,7.44986943840768,10.3134418455488,7.89034197352431,4.7609188134483,5.07065122804943,1.69422266034566,0.889294796111139,1.7997994345628,0,1.4209602298922,2.69640099466564,3.07374644257244,12.0279950277834,7.42532660824299,9.04397333810943,3.71346279724945,6.40518768759679,11.5141351262057,8.05101956553185,2.75765635983006,18.7196997698961,13.1517958227743,10.9060638611933,6.98997324970027,9.05727671663856,12.5019208933622,9.77140496504833,10.6924895906019,14.8214300343506,9.72274332063103,15.233769845504,10.8111678578674,15.5238696333027,10.8067330952703,17.3918693221007,10.3250865237766,4.75979933595425,3.2382191498269,4.54843492213368,6.2723764193627,13.0613310722529,11.930122580464,9.09251016110041,7.0667914902068,15.6336195952115,8.98285341900225,2.54805239706646,0,8.44315059943735,7.60079596425296,7.58286667522175,8.10705546005326,12.6879562987114,8.90652834388949,7.80683970447611,8.22056791442781,5.99600292865752,8.44046787094686,9.28950786372068,7.1629957057915,9.64060374164058,13.158541479712,6.19227386364912,10.8383789464764,9.49618529379692,8.727754556434,9.31958806090611,15.2246014446005,17.1746299587033,6.13096932500619,8.62668896442626,6.59893004092748,13.4694440697449,19.0234112044125,16.4700217014706,15.5811396619952,19.9897968221118,21.4800984157478,17.8697718321222,18.3332627266566,10.2857757488819,10.8234064430781,11.1198013710817,9.25944165900485,13.9228873970093,16.7828536236435,14.945156773844,14.9197769657358,14.9680298132921,19.7295129238669,16.3041000733928,13.7112786491678,11.6406716183735,14.9393803332577,15.8356011747554,13.1517439456545,14.7365042089567,15.6713474934975,12.5527103208846,11.9420560091096,8.42655824775882,8.4924809347856,9.09323198065896,12.0132948070591,12.195355119017,12.604344302271,10.4167683657493,15.1508458445501,14.9639099500757,15.5797742982773,18.5108646965737,15.4130251924664,16.2914251414346,19.3717607613332,14.7545233373457,15.6433986545106,17.564009223284,15.2995317386824,15.7717461423095,18.6257348406505,7.26921322564356,4.49565963328025,13.8637362847902,16.2565670302307,8.24751752461397,9.68080918192044,7.33847544688072,11.0330863145284,5.21981967698963,9.0584425098206,6.03204501120647,11.5394753783867,8.18849165900304,6.29173586057955,7.5648317456143,6.17337947088538,5.50036912763937,9.93962059704641,18.0332377076929,12.2190796707189,10.4734343070518,10.7307804432187,11.7619959051119,11.8088118383682,11.1469096767376,9.25478729413504,7.11486305009157,7.84171996865642,7.07612382407531,9.219346607779,12.1716072833102,9.88826354984909,11.2035374783825,8.63088412352432,6.48540907100142,7.4131581560782,2.87536413054709,7.81495990103857,4.68056509671841,7.32478746046624,5.20252499213545,4.3419916922703,13.1174765018289,10.4220276473767,11.4075483509418,10.6939404038369,9.38760993154008,14.9080569123216,19.2815349117671,13.8544889979037,13.7142575372386,15.9454576547118,12.437471955284,12.4536119183961,16.2323882953942,16.0560455025478,6.03165135757089,3.80733978673097,9.34352118736169,7.45029215022778,15.8945084087914,17.3473296156461,9.50822683184717,20.7026160307586,13.566853434899,13.2749173060857,12.4945570685023,11.9484398976276,10.9171350300373,13.587673477864,9.71545684019746,11.6902343164525,13.4397844501818,19.6006003017302,9.65192579416227,6.7664929393557,13.845391545054,11.8778488540226,7.96470830039777,7.04063844849446,6.65111825322452,8.86443874852721,5.31543407185391,10.4527950300935,10.8539883130653,10.1789444253702,11.4079161083111,12.9575070753685,11.5960469432499,4.12542172992747,11.234506989875,14.2248264284735,6.079858137789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| ||
|EntrezGene=67889 | |||
|HGNC= | |||
|UniProt=B0R043 | |||
|association_with_transcript=13bp_to_ENSMUST00000122456,ENSMUST00000142809_5end | |||
|description=CAGE_peak_2_at_Rbm18_5end | |||
|id=chr2:35992098..35992117,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!9.53e-09!94;UBERON:0000033!1.64e-07!63;UBERON:0007811!4.43e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.29e-08,92 | |||
|phase1_expression=16.1750335575842,3.14077866875425,4.54999239389536,2.11724947914781,2.00358291978539,4.53274034162102,4.67225281191051,15.236552166106,19.006477490475,19.1932911584035,14.7247452673934,14.8376215731326,14.0384598543589,14.5992072039726,5.3297561890506,6.2767332890846,4.19737126876888,10.4102514568218,9.32378148519024,11.0341309467488,10.2051948181284,8.53902180327614,9.66439219814061,4.31979541542198,3.67054849707472,3.44539178469012,2.15380998079537,2.37018355954478,4.56056206695297,3.2763916868791,4.21287970245079,2.54012269383853,4.92051830067656,0,4.33277429626912,4.82080471539628,4.08338712524738,21.7636447983192,13.2827008569046,22.5115209908733,25.8821854733646,21.1744100337118,31.558172947025,9.81995180209503,10.44182391561,9.54443111240744,0.782391344348039,1.52617609466313,1.31811709640683,3.30530828426282,2.37976916763116,1.43752564364972,20.1339127269284,14.5072428402269,10.7550015725588,9.26133969729409,7.44986943840768,10.3134418455488,7.89034197352431,4.7609188134483,5.07065122804943,1.69422266034566,0.889294796111139,1.7997994345628,0,1.4209602298922,2.69640099466564,3.07374644257244,12.0279950277834,7.42532660824299,9.04397333810943,3.71346279724945,6.40518768759679,11.5141351262057,8.05101956553185,2.75765635983006,18.7196997698961,13.1517958227743,10.9060638611933,6.98997324970027,9.05727671663856,12.5019208933622,9.77140496504833,10.6924895906019,14.8214300343506,9.72274332063103,15.233769845504,10.8111678578674,15.5238696333027,10.8067330952703,17.3918693221007,10.3250865237766,4.75979933595425,3.2382191498269,4.54843492213368,6.2723764193627,13.0613310722529,11.930122580464,9.09251016110041,7.0667914902068,15.6336195952115,8.98285341900225,2.54805239706646,0,8.44315059943735,7.60079596425296,7.58286667522175,8.10705546005326,12.6879562987114,8.90652834388949,7.80683970447611,8.22056791442781,5.99600292865752,8.44046787094686,9.28950786372068,7.1629957057915,9.64060374164058,13.158541479712,6.19227386364912,10.8383789464764,9.49618529379692,8.727754556434,9.31958806090611,15.2246014446005,17.1746299587033,6.13096932500619,8.62668896442626,6.59893004092748,13.4694440697449,19.0234112044125,16.4700217014706,15.5811396619952,19.9897968221118,21.4800984157478,17.8697718321222,18.3332627266566,10.2857757488819,10.8234064430781,11.1198013710817,9.25944165900485,13.9228873970093,16.7828536236435,14.945156773844,14.9197769657358,14.9680298132921,19.7295129238669,16.3041000733928,13.7112786491678,11.6406716183735,14.9393803332577,15.8356011747554,13.1517439456545,14.7365042089567,15.6713474934975,12.5527103208846,11.9420560091096,8.42655824775882,8.4924809347856,9.09323198065896,12.0132948070591,12.195355119017,12.604344302271,10.4167683657493,15.1508458445501,14.9639099500757,15.5797742982773,18.5108646965737,15.4130251924664,16.2914251414346,19.3717607613332,14.7545233373457,15.6433986545106,17.564009223284,15.2995317386824,15.7717461423095,18.6257348406505,7.26921322564356,4.49565963328025,13.8637362847902,16.2565670302307,8.24751752461397,9.68080918192044,7.33847544688072,11.0330863145284,5.21981967698963,9.0584425098206,6.03204501120647,11.5394753783867,8.18849165900304,6.29173586057955,7.5648317456143,6.17337947088538,5.50036912763937,9.93962059704641,18.0332377076929,12.2190796707189,10.4734343070518,10.7307804432187,11.7619959051119,11.8088118383682,11.1469096767376,9.25478729413504,7.11486305009157,7.84171996865642,7.07612382407531,9.219346607779,12.1716072833102,9.88826354984909,11.2035374783825,8.63088412352432,6.48540907100142,7.4131581560782,2.87536413054709,7.81495990103857,4.68056509671841,7.32478746046624,5.20252499213545,4.3419916922703,13.1174765018289,10.4220276473767,11.4075483509418,10.6939404038369,9.38760993154008,14.9080569123216,19.2815349117671,13.8544889979037,13.7142575372386,15.9454576547118,12.437471955284,12.4536119183961,16.2323882953942,16.0560455025478,6.03165135757089,3.80733978673097,9.34352118736169,7.45029215022778,15.8945084087914,17.3473296156461,9.50822683184717,20.7026160307586,13.566853434899,13.2749173060857,12.4945570685023,11.9484398976276,10.9171350300373,13.587673477864,9.71545684019746,11.6902343164525,13.4397844501818,19.6006003017302,9.65192579416227,6.7664929393557,13.845391545054,11.8778488540226,7.96470830039777,7.04063844849446,6.65111825322452,8.86443874852721,5.31543407185391,10.4527950300935,10.8539883130653,10.1789444253702,11.4079161083111,12.9575070753685,11.5960469432499,4.12542172992747,11.234506989875,14.2248264284735,6.07985813778946,13.9319072770535,14.3645589250242,10.5237602385222,14.4803138129866,5.78483403317739,11.4989136951218,13.7690846061483,10.8058915046931,8.73897140589844,11.7869031488011,10.7960135621399,9.43041517624778,9.68431308495861,7.28702091574627,17.2445530869774,9.91051108627546,10.1129565301979,9.63011542322501,9.23005439322986,6.83471138605126,8.92234875505438,14.4481665494777,15.3946597556024,15.340197092291,14.3200592702267,12.6534397432454,10.775931757723,8.96444328820951,9.408973320651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| |||
|short_description=p2@Rbm18 | |||
}} | |||
Revision as of 23:56, 13 September 2013
| Short description: | p2@Rbm18 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Rbm18_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 13bp_to_ENSMUST00000122456, ENSMUST00000142809_5end |
| EntrezGene: | Rbm18 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| structure with developmental contribution from neural crest | 9.29e-08 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
