FFCP PHASE1:Mm9::chr11:115970232..115970242,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=26|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:115970232..115970242,+|id=chr11:115970232..115970242,+|ontology_enrichment_celltype=CL:0000222!4.36e-07!7|ontology_enrichment_celltype_v019_2=CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0000222,1.08e-17,7;CL:0000215,4.56e-11,3;CL:0002494,5.71e-11,3;CL:0000737,5.71e-11,3;CL:0000746,5.71e-11,3;CL:0000513,5.71e-11,3;CL:0000182,3.64e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.14e-11!23;UBERON:0001009!1.14e-11!23;UBERON:0004872!1.99e-08!33;UBERON:0007100!4.37e-07!18;UBERON:0000948!4.37e-07!18;UBERON:0005498!4.37e-07!18;UBERON:0004140!4.37e-07!18;UBERON:0009881!4.37e-07!18;UBERON:0004141!4.37e-07!18;UBERON:0003084!4.37e-07!18;UBERON:0007005!4.37e-07!18;UBERON:0004139!4.37e-07!18;UBERON:0004291!4.37e-07!18;UBERON:0000055!6.97e-07!5;UBERON:0001981!6.97e-07!5;UBERON:0002049!6.97e-07!5;UBERON:0007500!6.97e-07!5;UBERON:0007798!6.97e-07!5;UBERON:0004537!6.97e-07!5;UBERON:0006965!6.97e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0.771778308107841,1.43266719969378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,9.27566363845369,0,0,0,0,0,0,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.804820204198858,0.350296027101508,0,0.492502392237286,0.243206428637567,0.292399974850665,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0|short_description=p@chr11:115970232..115970242,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=26 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:115970232..115970242,+ | |||
|id=chr11:115970232..115970242,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.36e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,2.87e-30,1;CL:0002078,2.87e-30,1;CL:0000115,2.87e-30,1;CL:0002262,2.87e-30,1;CL:1000398,2.87e-30,1;CL:0000222,1.08e-17,7;CL:0000215,4.56e-11,3;CL:0002494,5.71e-11,3;CL:0000737,5.71e-11,3;CL:0000746,5.71e-11,3;CL:0000513,5.71e-11,3;CL:0000182,3.64e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.14e-11!23;UBERON:0001009!1.14e-11!23;UBERON:0004872!1.99e-08!33;UBERON:0007100!4.37e-07!18;UBERON:0000948!4.37e-07!18;UBERON:0005498!4.37e-07!18;UBERON:0004140!4.37e-07!18;UBERON:0009881!4.37e-07!18;UBERON:0004141!4.37e-07!18;UBERON:0003084!4.37e-07!18;UBERON:0007005!4.37e-07!18;UBERON:0004139!4.37e-07!18;UBERON:0004291!4.37e-07!18;UBERON:0000055!6.97e-07!5;UBERON:0001981!6.97e-07!5;UBERON:0002049!6.97e-07!5;UBERON:0007500!6.97e-07!5;UBERON:0007798!6.97e-07!5;UBERON:0004537!6.97e-07!5;UBERON:0006965!6.97e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.87e-30,1;UBERON:0001281,2.87e-30,1;UBERON:0000353,2.87e-30,1;UBERON:0003497,2.87e-30,1;UBERON:0003909,2.87e-30,1;UBERON:0003928,2.87e-30,1;UBERON:0003835,2.87e-30,1;UBERON:0003513,2.87e-30,1;UBERON:0001280,2.87e-30,1;UBERON:0004647,2.87e-30,1;UBERON:0002294,2.87e-30,1;UBERON:0001173,2.87e-30,1;UBERON:0004912,2.87e-30,1;UBERON:0005171,2.87e-30,1;UBERON:0000055,3.64e-07,5;UBERON:0007500,3.64e-07,5;UBERON:0001981,3.64e-07,5;UBERON:0002049,3.64e-07,5;UBERON:0007798,3.64e-07,5;UBERON:0004537,3.64e-07,5;UBERON:0006965,3.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0.771778308107841,1.43266719969378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,9.27566363845369,0,0,0,0,0,0,0,0.519572009205738,0,0,0,0,0,0,0,0,0,0.517875767294343,0.148442139064825,0,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0.804820204198858,0.350296027101508,0,0.492502392237286,0.243206428637567,0.292399974850665,0.439100230582101,0.268412837520744,0,0,0,0,0,0,0.128867461322093,0,0.444756087689741,0.190225626112559,0,0,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0.117211686592203,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0.120625849856312,0.119372344003136,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0.187682475451182,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0.320919209591815,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr11:115970232..115970242,+ | |||
}} |
Revision as of 18:50, 12 September 2013
Short description: | p@chr11:115970232..115970242, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:115970232..115970242, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 2.87e-30 | 1 |
meso-epithelial cell | 2.87e-30 | 1 |
endothelial cell | 2.87e-30 | 1 |
endothelial cell of sinusoid | 2.87e-30 | 1 |
endothelial cell of hepatic sinusoid | 2.87e-30 | 1 |
mesodermal cell | 1.08e-17 | 7 |
barrier cell | 4.56e-11 | 3 |
cardiocyte | 5.71e-11 | 3 |
striated muscle cell | 5.71e-11 | 3 |
cardiac muscle cell | 5.71e-11 | 3 |
cardiac muscle myoblast | 5.71e-11 | 3 |
hepatocyte | 3.64e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.87e-30 | 1 |
hepatic sinusoid | 2.87e-30 | 1 |
parenchyma | 2.87e-30 | 1 |
abdomen blood vessel | 2.87e-30 | 1 |
sinusoid | 2.87e-30 | 1 |
digestive system duct | 2.87e-30 | 1 |
abdominal segment blood vessel | 2.87e-30 | 1 |
trunk blood vessel | 2.87e-30 | 1 |
liver parenchyma | 2.87e-30 | 1 |
liver lobule | 2.87e-30 | 1 |
biliary system | 2.87e-30 | 1 |
biliary tree | 2.87e-30 | 1 |
biliary bud | 2.87e-30 | 1 |
hepatic duct | 2.87e-30 | 1 |
vessel | 3.64e-07 | 5 |
epithelial tube open at both ends | 3.64e-07 | 5 |
blood vessel | 3.64e-07 | 5 |
vasculature | 3.64e-07 | 5 |
vascular system | 3.64e-07 | 5 |
blood vasculature | 3.64e-07 | 5 |
vascular cord | 3.64e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.