FFCP PHASE1:Mm9::chr3:9984225..9984242,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:9984225..9984242,+|id=chr3:9984225..9984242,+|ontology_enrichment_celltype=CL:0000049!1.65e-13!19;CL:0000988!1.08e-11!32;CL:0002032!1.08e-11!32;CL:0000037!1.08e-11!32;CL:0000566!1.08e-11!32;CL:0000837!1.08e-11!32;CL:0000557!5.09e-10!7;CL:0000034!5.81e-10!97;CL:0002320!2.49e-09!46;CL:0000134!2.49e-09!46;CL:0000219!1.10e-07!54;CL:0000144!2.09e-07!121;CL:0000012!2.09e-07!121|ontology_enrichment_celltype_v019_2=CL:0000049,1.36e-14,19;CL:0000557,1.93e-13,7;CL:0000988,2.00e-08,32;CL:0002032,2.00e-08,32;CL:0000037,2.00e-08,32;CL:0000837,2.00e-08,32;CL:0000034,2.57e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.33e-08,3;DOID:4045,1.33e-08,3|ontology_enrichment_uberon=UBERON:0002384!2.49e-09!46|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.906676722619,0,18.8234076169925,2.73218193983378,2.42755176515577,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18890747035522,9.59844369589452,3.93917703926501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31991868581911,4.63226232806487,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.538662659619,12.4556792568056,6.21899882119907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:9984225..9984242,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:9984225..9984242,+ | |||
|id=chr3:9984225..9984242,+ | |||
|ontology_enrichment_celltype=CL:0000049!1.65e-13!19;CL:0000988!1.08e-11!32;CL:0002032!1.08e-11!32;CL:0000037!1.08e-11!32;CL:0000566!1.08e-11!32;CL:0000837!1.08e-11!32;CL:0000557!5.09e-10!7;CL:0000034!5.81e-10!97;CL:0002320!2.49e-09!46;CL:0000134!2.49e-09!46;CL:0000219!1.10e-07!54;CL:0000144!2.09e-07!121;CL:0000012!2.09e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.36e-14,19;CL:0000557,1.93e-13,7;CL:0000988,2.00e-08,32;CL:0002032,2.00e-08,32;CL:0000037,2.00e-08,32;CL:0000837,2.00e-08,32;CL:0000034,2.57e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.33e-08,3;DOID:4045,1.33e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.49e-09!46 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.906676722619,0,18.8234076169925,2.73218193983378,2.42755176515577,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.18890747035522,9.59844369589452,3.93917703926501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.31991868581911,4.63226232806487,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.538662659619,12.4556792568056,6.21899882119907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:9984225..9984242,+ | |||
}} |
Revision as of 03:13, 14 September 2013
Short description: | p@chr3:9984225..9984242, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:9984225..9984242, + |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.36e-14 | 19 |
granulocyte monocyte progenitor cell | 1.93e-13 | 7 |
hematopoietic cell | 2.00e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.00e-08 | 32 |
hematopoietic stem cell | 2.00e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.00e-08 | 32 |
stem cell | 2.57e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.33e-08 | 3 |
muscle cancer | 1.33e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.