FFCP PHASE1:Mm9::chr1:134420258..134420283,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21367|HGNC=|MCL_coexpression_id=924|UniProt=|association_with_transcript=-196bp_to_uc007cpc.1_5end|description=CAGE_peak_4_at_Cntn2_5end|id=chr1:134420258..134420283,-|ontology_enrichment_celltype=CL:0000117!1.40e-36!23;CL:0000337!1.40e-36!23;CL:0000540!4.21e-24!33;CL:0000047!4.21e-24!33;CL:0000031!4.21e-24!33;CL:0000404!4.21e-24!33;CL:0000393!1.09e-19!39;CL:0000211!1.09e-19!39;CL:0002319!1.96e-17!43;CL:0000221!6.18e-17!44;CL:0000133!6.18e-17!44;CL:0002609!3.52e-16!6;CL:0000055!2.32e-14!50;CL:0002321!5.41e-09!70;CL:0000220!5.41e-09!70;CL:0000120!1.10e-08!3;CL:0002610!1.31e-08!3;CL:0002608!1.85e-08!3;CL:0002613!7.99e-08!3|ontology_enrichment_celltype_v019_2=CL:0002609,2.03e-33,6;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002610,1.88e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!8.56e-23!49;UBERON:0000955!3.14e-22!50;UBERON:0006238!3.14e-22!50;UBERON:0001017!1.11e-21!73;UBERON:0005743!1.11e-21!73;UBERON:0000073!6.21e-21!75;UBERON:0001016!6.21e-21!75;UBERON:0002020!2.03e-20!34;UBERON:0002791!1.65e-19!29;UBERON:0003528!1.65e-19!29;UBERON:0001893!1.65e-19!29;UBERON:0002780!1.76e-19!39;UBERON:0001890!1.76e-19!39;UBERON:0006240!1.76e-19!39;UBERON:0003080!7.02e-19!40;UBERON:0001049!1.13e-18!52;UBERON:0005068!1.13e-18!52;UBERON:0006241!1.13e-18!52;UBERON:0007135!1.13e-18!52;UBERON:0000033!3.92e-18!63;UBERON:0003056!2.91e-16!49;UBERON:0004121!6.17e-15!102;UBERON:0000924!6.17e-15!102;UBERON:0006601!6.17e-15!102;UBERON:0002346!1.31e-13!71;UBERON:0003075!1.31e-13!71;UBERON:0007284!1.31e-13!71;UBERON:0007811!8.59e-12!86;UBERON:0000956!6.09e-11!21;UBERON:0001869!6.09e-11!21;UBERON:0000203!6.09e-11!21;UBERON:0002420!1.25e-10!8;UBERON:0007245!1.25e-10!8;UBERON:0010009!1.25e-10!8;UBERON:0010011!1.25e-10!8;UBERON:0000454!1.25e-10!8;UBERON:0000153!2.55e-10!94;UBERON:0004684!1.31e-08!3;UBERON:0002275!1.31e-08!3;UBERON:0000369!4.25e-08!5;UBERON:0002435!4.25e-08!5;UBERON:0000204!4.25e-08!5;UBERON:0010082!4.25e-08!5|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.91e-10,21;UBERON:0001869,2.91e-10,21;UBERON:0000203,2.91e-10,21;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0003528,1.15e-07,29;UBERON:0002791,1.15e-07,29;UBERON:0001893,1.15e-07,29;UBERON:0000073,2.91e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.34796496001021,4.45519596494579,1.47227472945967,0,0,0.367472397644862,0.287536413054709,0.919218786610021,1.10115880999389,0.255374676170375,0.768032666281217,0.263772575460388,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Cntn2}} | ||
|EntrezGene=21367 | |||
|HGNC= | |||
|MCL_coexpression_id=924 | |||
|UniProt= | |||
|association_with_transcript=-196bp_to_uc007cpc.1_5end | |||
|description=CAGE_peak_4_at_Cntn2_5end | |||
|id=chr1:134420258..134420283,- | |||
|ontology_enrichment_celltype=CL:0000117!1.40e-36!23;CL:0000337!1.40e-36!23;CL:0000540!4.21e-24!33;CL:0000047!4.21e-24!33;CL:0000031!4.21e-24!33;CL:0000404!4.21e-24!33;CL:0000393!1.09e-19!39;CL:0000211!1.09e-19!39;CL:0002319!1.96e-17!43;CL:0000221!6.18e-17!44;CL:0000133!6.18e-17!44;CL:0002609!3.52e-16!6;CL:0000055!2.32e-14!50;CL:0002321!5.41e-09!70;CL:0000220!5.41e-09!70;CL:0000120!1.10e-08!3;CL:0002610!1.31e-08!3;CL:0002608!1.85e-08!3;CL:0002613!7.99e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.03e-33,6;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44;CL:0002610,1.88e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!8.56e-23!49;UBERON:0000955!3.14e-22!50;UBERON:0006238!3.14e-22!50;UBERON:0001017!1.11e-21!73;UBERON:0005743!1.11e-21!73;UBERON:0000073!6.21e-21!75;UBERON:0001016!6.21e-21!75;UBERON:0002020!2.03e-20!34;UBERON:0002791!1.65e-19!29;UBERON:0003528!1.65e-19!29;UBERON:0001893!1.65e-19!29;UBERON:0002780!1.76e-19!39;UBERON:0001890!1.76e-19!39;UBERON:0006240!1.76e-19!39;UBERON:0003080!7.02e-19!40;UBERON:0001049!1.13e-18!52;UBERON:0005068!1.13e-18!52;UBERON:0006241!1.13e-18!52;UBERON:0007135!1.13e-18!52;UBERON:0000033!3.92e-18!63;UBERON:0003056!2.91e-16!49;UBERON:0004121!6.17e-15!102;UBERON:0000924!6.17e-15!102;UBERON:0006601!6.17e-15!102;UBERON:0002346!1.31e-13!71;UBERON:0003075!1.31e-13!71;UBERON:0007284!1.31e-13!71;UBERON:0007811!8.59e-12!86;UBERON:0000956!6.09e-11!21;UBERON:0001869!6.09e-11!21;UBERON:0000203!6.09e-11!21;UBERON:0002420!1.25e-10!8;UBERON:0007245!1.25e-10!8;UBERON:0010009!1.25e-10!8;UBERON:0010011!1.25e-10!8;UBERON:0000454!1.25e-10!8;UBERON:0000153!2.55e-10!94;UBERON:0004684!1.31e-08!3;UBERON:0002275!1.31e-08!3;UBERON:0000369!4.25e-08!5;UBERON:0002435!4.25e-08!5;UBERON:0000204!4.25e-08!5;UBERON:0010082!4.25e-08!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,2.91e-10,21;UBERON:0001869,2.91e-10,21;UBERON:0000203,2.91e-10,21;UBERON:0004684,1.88e-08,3;UBERON:0002275,1.88e-08,3;UBERON:0003528,1.15e-07,29;UBERON:0002791,1.15e-07,29;UBERON:0001893,1.15e-07,29;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.34796496001021,4.45519596494579,1.47227472945967,0,0,0.367472397644862,0.287536413054709,0.919218786610021,1.10115880999389,0.255374676170375,0.768032666281217,0.263772575460388,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0,0,0,0,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Cntn2 | |||
}} |
Revision as of 18:51, 13 September 2013
Short description: | p4@Cntn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cntn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:924 |
Association with transcript: | -196bp_to_uc007cpc.1_5end |
EntrezGene: | Cntn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.03e-33 | 6 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
raphe nuclei neuron | 1.88e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 2.91e-10 | 21 |
cerebral hemisphere | 2.91e-10 | 21 |
pallium | 2.91e-10 | 21 |
raphe nuclei | 1.88e-08 | 3 |
reticular formation | 1.88e-08 | 3 |
brain grey matter | 1.15e-07 | 29 |
regional part of telencephalon | 1.15e-07 | 29 |
telencephalon | 1.15e-07 | 29 |
regional part of nervous system | 2.91e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.