FFCP PHASE1:Mm9::chr11:5965700..5965731,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12323|HGNC=|MCL_coexpression_id=1|UniProt=Q5SVJ1|association_with_transcript=13bp_to_ENSMUST00000002817_5end|description=CAGE_peak_3_at_Camk2b_5end|id=chr11:5965700..5965731,-|ontology_enrichment_celltype=CL:0000117!3.24e-14!23;CL:0000337!3.24e-14!23;CL:0000540!1.24e-11!33;CL:0000047!1.24e-11!33;CL:0000031!1.24e-11!33;CL:0000404!1.24e-11!33;CL:0002319!3.02e-08!43;CL:0000221!3.47e-08!44;CL:0000133!3.47e-08!44;CL:0000393!5.95e-08!39;CL:0000211!5.95e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,6.54e-19,23;CL:0000337,6.54e-19,23;CL:0000540,1.06e-10,33;CL:0000047,1.06e-10,33;CL:0000031,1.06e-10,33;CL:0000404,1.06e-10,33;CL:0000393,6.42e-08,39;CL:0000211,6.42e-08,39;CL:0002319,8.80e-08,43;CL:0000221,1.95e-07,44;CL:0000133,1.95e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.92e-24!73;UBERON:0005743!1.92e-24!73;UBERON:0000073!4.05e-24!75;UBERON:0001016!4.05e-24!75;UBERON:0001049!2.71e-22!52;UBERON:0005068!2.71e-22!52;UBERON:0006241!2.71e-22!52;UBERON:0007135!2.71e-22!52;UBERON:0000955!2.03e-21!50;UBERON:0006238!2.03e-21!50;UBERON:0004121!8.27e-21!102;UBERON:0000924!8.27e-21!102;UBERON:0006601!8.27e-21!102;UBERON:0002616!1.36e-20!49;UBERON:0002020!1.05e-19!34;UBERON:0002346!7.51e-19!71;UBERON:0003075!7.51e-19!71;UBERON:0007284!7.51e-19!71;UBERON:0000033!1.19e-18!63;UBERON:0003080!1.44e-17!40;UBERON:0002780!7.24e-17!39;UBERON:0001890!7.24e-17!39;UBERON:0006240!7.24e-17!39;UBERON:0002791!1.51e-16!29;UBERON:0003528!1.51e-16!29;UBERON:0001893!1.51e-16!29;UBERON:0003056!5.16e-16!49;UBERON:0000956!1.04e-11!21;UBERON:0001869!1.04e-11!21;UBERON:0000203!1.04e-11!21;UBERON:0002619!2.01e-09!17;UBERON:0002021!5.45e-09!10;UBERON:0000411!5.45e-09!10;UBERON:0001950!5.45e-09!10;UBERON:0007811!3.02e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.38e-30,54;UBERON:0001049,3.21e-28,52;UBERON:0005068,3.21e-28,52;UBERON:0006241,3.21e-28,52;UBERON:0007135,3.21e-28,52;UBERON:0002020,3.52e-27,34;UBERON:0001017,1.02e-26,73;UBERON:0001016,1.68e-25,75;UBERON:0000955,4.10e-24,47;UBERON:0006238,4.10e-24,47;UBERON:0002346,8.68e-24,64;UBERON:0003075,8.68e-24,64;UBERON:0007284,8.68e-24,64;UBERON:0002616,4.97e-23,46;UBERON:0003528,7.91e-23,29;UBERON:0002791,7.91e-23,29;UBERON:0001893,7.91e-23,29;UBERON:0003080,3.70e-21,40;UBERON:0004121,7.18e-21,95;UBERON:0000924,7.18e-21,95;UBERON:0006601,7.18e-21,95;UBERON:0002780,3.19e-20,39;UBERON:0001890,3.19e-20,39;UBERON:0006240,3.19e-20,39;UBERON:0010371,1.15e-19,73;UBERON:0003056,8.31e-19,49;UBERON:0000956,3.70e-16,21;UBERON:0001869,3.70e-16,21;UBERON:0000203,3.70e-16,21;UBERON:0002619,5.20e-13,17;UBERON:0010314,2.65e-12,92;UBERON:0002021,9.57e-12,10;UBERON:0000411,9.57e-12,10;UBERON:0001950,9.57e-12,10;UBERON:0002420,8.40e-08,8;UBERON:0007245,8.40e-08,8;UBERON:0010009,8.40e-08,8;UBERON:0010011,8.40e-08,8;UBERON:0000454,8.40e-08,8;UBERON:0003076,1.70e-07,12;UBERON:0003057,1.70e-07,12|phase1_expression=0,0,0,0,0.500895729946347,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92954546586233,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.89034197352431,5.28990979272033,10.1413024560989,0,0,0,0,0,1.19840044207362,1.53687322128622,4.35496371695606,5.40023753326763,6.52007380189284,16.5677570954206,10.3808214247258,5.63457676388789,2.1086003624012,8.27296907949019,24.2254938198655,35.2417053115118,31.9501589172986,5.93488294785872,5.03182039813253,2.6045668527838,17.0301629390842,9.56696437053856,23.6837284054056,17.6777151284201,11.5321061447273,5.96478226640962,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,2.94933282276679,0,0,0,0.14084341977668,0,0,0,0,0,0,2.62622923353838,0,0.742210695324124,0,0,0.691846491768175,0,0.940709657085638,0.251333182659351,0,0,1.76922110389975,4.69123864847487,1.76673214768315,0.969750506270444,0,25.7647101370161,20.5257772677186,0,0,0,0,26.6627338140584,75.4875994650734,22.8690920845413,50.4090528557602,46.5402132341202,26.3890816590641,44.6163473436334,0.203678727700633,0.622034853050465,0.252722758433675,1.05220927943237,0,0,0.180062129805349,0,0.408218994907967,1.15302348256365,1.3118241438362,1.55222022443409,0,0,0,0.219195732427575,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,117.762371195911,22.3303008863047,0,0.264450566663544,0.213288250535234,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0.202860121388503,0.482354319504834,1.01850340712568,1.43848068725405,0.648540907100142,0.823684239564244,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,11.2385412991454,15.3547309435786,0,3.28212205365685,0.315508219416257,0,0.861693590931196,0.477937595905104,0.445597348164788,0.566153061577665,0,0.584511715822624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| ||
|EntrezGene=12323 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q5SVJ1 | |||
|association_with_transcript=13bp_to_ENSMUST00000002817_5end | |||
|description=CAGE_peak_3_at_Camk2b_5end | |||
|id=chr11:5965700..5965731,- | |||
|ontology_enrichment_celltype=CL:0000117!3.24e-14!23;CL:0000337!3.24e-14!23;CL:0000540!1.24e-11!33;CL:0000047!1.24e-11!33;CL:0000031!1.24e-11!33;CL:0000404!1.24e-11!33;CL:0002319!3.02e-08!43;CL:0000221!3.47e-08!44;CL:0000133!3.47e-08!44;CL:0000393!5.95e-08!39;CL:0000211!5.95e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.54e-19,23;CL:0000337,6.54e-19,23;CL:0000540,1.06e-10,33;CL:0000047,1.06e-10,33;CL:0000031,1.06e-10,33;CL:0000404,1.06e-10,33;CL:0000393,6.42e-08,39;CL:0000211,6.42e-08,39;CL:0002319,8.80e-08,43;CL:0000221,1.95e-07,44;CL:0000133,1.95e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.92e-24!73;UBERON:0005743!1.92e-24!73;UBERON:0000073!4.05e-24!75;UBERON:0001016!4.05e-24!75;UBERON:0001049!2.71e-22!52;UBERON:0005068!2.71e-22!52;UBERON:0006241!2.71e-22!52;UBERON:0007135!2.71e-22!52;UBERON:0000955!2.03e-21!50;UBERON:0006238!2.03e-21!50;UBERON:0004121!8.27e-21!102;UBERON:0000924!8.27e-21!102;UBERON:0006601!8.27e-21!102;UBERON:0002616!1.36e-20!49;UBERON:0002020!1.05e-19!34;UBERON:0002346!7.51e-19!71;UBERON:0003075!7.51e-19!71;UBERON:0007284!7.51e-19!71;UBERON:0000033!1.19e-18!63;UBERON:0003080!1.44e-17!40;UBERON:0002780!7.24e-17!39;UBERON:0001890!7.24e-17!39;UBERON:0006240!7.24e-17!39;UBERON:0002791!1.51e-16!29;UBERON:0003528!1.51e-16!29;UBERON:0001893!1.51e-16!29;UBERON:0003056!5.16e-16!49;UBERON:0000956!1.04e-11!21;UBERON:0001869!1.04e-11!21;UBERON:0000203!1.04e-11!21;UBERON:0002619!2.01e-09!17;UBERON:0002021!5.45e-09!10;UBERON:0000411!5.45e-09!10;UBERON:0001950!5.45e-09!10;UBERON:0007811!3.02e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.38e-30,54;UBERON:0001049,3.21e-28,52;UBERON:0005068,3.21e-28,52;UBERON:0006241,3.21e-28,52;UBERON:0007135,3.21e-28,52;UBERON:0002020,3.52e-27,34;UBERON:0001017,1.02e-26,73;UBERON:0001016,1.68e-25,75;UBERON:0000955,4.10e-24,47;UBERON:0006238,4.10e-24,47;UBERON:0002346,8.68e-24,64;UBERON:0003075,8.68e-24,64;UBERON:0007284,8.68e-24,64;UBERON:0002616,4.97e-23,46;UBERON:0003528,7.91e-23,29;UBERON:0002791,7.91e-23,29;UBERON:0001893,7.91e-23,29;UBERON:0003080,3.70e-21,40;UBERON:0004121,7.18e-21,95;UBERON:0000924,7.18e-21,95;UBERON:0006601,7.18e-21,95;UBERON:0002780,3.19e-20,39;UBERON:0001890,3.19e-20,39;UBERON:0006240,3.19e-20,39;UBERON:0010371,1.15e-19,73;UBERON:0003056,8.31e-19,49;UBERON:0000956,3.70e-16,21;UBERON:0001869,3.70e-16,21;UBERON:0000203,3.70e-16,21;UBERON:0002619,5.20e-13,17;UBERON:0010314,2.65e-12,92;UBERON:0002021,9.57e-12,10;UBERON:0000411,9.57e-12,10;UBERON:0001950,9.57e-12,10;UBERON:0002420,8.40e-08,8;UBERON:0007245,8.40e-08,8;UBERON:0010009,8.40e-08,8;UBERON:0010011,8.40e-08,8;UBERON:0000454,8.40e-08,8;UBERON:0003076,1.70e-07,12;UBERON:0003057,1.70e-07,12 | |||
|phase1_expression=0,0,0,0,0.500895729946347,1.17515490338323,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92954546586233,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.89034197352431,5.28990979272033,10.1413024560989,0,0,0,0,0,1.19840044207362,1.53687322128622,4.35496371695606,5.40023753326763,6.52007380189284,16.5677570954206,10.3808214247258,5.63457676388789,2.1086003624012,8.27296907949019,24.2254938198655,35.2417053115118,31.9501589172986,5.93488294785872,5.03182039813253,2.6045668527838,17.0301629390842,9.56696437053856,23.6837284054056,17.6777151284201,11.5321061447273,5.96478226640962,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,2.94933282276679,0,0,0,0.14084341977668,0,0,0,0,0,0,2.62622923353838,0,0.742210695324124,0,0,0.691846491768175,0,0.940709657085638,0.251333182659351,0,0,1.76922110389975,4.69123864847487,1.76673214768315,0.969750506270444,0,25.7647101370161,20.5257772677186,0,0,0,0,26.6627338140584,75.4875994650734,22.8690920845413,50.4090528557602,46.5402132341202,26.3890816590641,44.6163473436334,0.203678727700633,0.622034853050465,0.252722758433675,1.05220927943237,0,0,0.180062129805349,0,0.408218994907967,1.15302348256365,1.3118241438362,1.55222022443409,0,0,0,0.219195732427575,0,0.696504333044333,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,117.762371195911,22.3303008863047,0,0.264450566663544,0.213288250535234,0,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0,0,0.898819408654221,0.432276099749388,0.199141273254367,0.189667900953082,0.342745537829186,0,0,0.387904974335251,0.0701358198903186,0,0,0,0,0,0,0,0,0.202860121388503,0.482354319504834,1.01850340712568,1.43848068725405,0.648540907100142,0.823684239564244,0,0,0,0,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,11.2385412991454,15.3547309435786,0,3.28212205365685,0.315508219416257,0,0.861693590931196,0.477937595905104,0.445597348164788,0.566153061577665,0,0.584511715822624,0.790575555893047,88.6846833324187,0,0.178065603667255,0.162886959353576,0,0,0.728341908464944,0.302323556964751,0.565815239267694,0.885905678642318,0,1.03371317267288,2.54473610634254,0.712994756769443,0.948110273807448,0,0,4.42571487479924,0.18006109403131,0,0,0.354680467284547,0.713475270408282,0.822745103010605,2.43571959291679,0,0,0,1.31909002353184,0.645857706783622,0.361877549568935,0.119372344003136,0.328281799490123,0.582961673259701,10.198391610578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0,0,0,0,0,0,50.2629139929189,51.5564264888038,57.2895513439397,70.4598047609119,56.8618491409633,39.2804826642644,42.5264175146038,41.4295506966283,51.2050922152151,48.1517089929193,0,0.399024873401031,0.170733605754134,1.45864030240976,0.628839487883947,2.75765262675021,2.44471400581777,1.44224540067226,2.24643446714271,2.77966932940177,1.77435509923168,3.9611531691076,2.24739617927718,1.79270426733634,3.0440798546475,1.42888107384922,1.73826488917283,1.73618298417335,1.23625770240992,1.03039244094078,1.71434626192708,1.95223386775271,2.14592570952589,2.18019624948493,2.72917203204459,2.03075058940024,1.82927972872773,1.57841826862706,2.71608227691724,2.24456908663095,2.13543032623513,1.57607171800902,2.04615521584845,1.54936841185966,1.54325288784913,3.49734809113124,2.33931608445408,1.71896843238639,1.72159498861959,3.75005412503176,2.78241402744506 | |||
|short_description=p3@Camk2b | |||
}} |
Revision as of 20:11, 12 September 2013
Short description: | p3@Camk2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Camk2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 13bp_to_ENSMUST00000002817_5end |
EntrezGene: | Camk2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.54e-19 | 23 |
neuroblast (sensu Vertebrata) | 6.54e-19 | 23 |
neuron | 1.06e-10 | 33 |
neuronal stem cell | 1.06e-10 | 33 |
neuroblast | 1.06e-10 | 33 |
electrically signaling cell | 1.06e-10 | 33 |
electrically responsive cell | 6.42e-08 | 39 |
electrically active cell | 6.42e-08 | 39 |
neural cell | 8.80e-08 | 43 |
ectodermal cell | 1.95e-07 | 44 |
neurectodermal cell | 1.95e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.