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FFCP PHASE1:Mm9::chr19:60018977..60019003,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=74998|HGNC=|MCL_coexpression_id=884|UniProt=G3XA57|association_with_transcript=-74bp_to_ENSMUST00000170819_5end|description=CAGE_peak_4_at_Rab11fip2_5end|id=chr19:60018977..60019003,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.70e-10!63;UBERON:0002020!3.52e-10!34;UBERON:0000955!3.69e-10!50;UBERON:0006238!3.69e-10!50;UBERON:0002616!7.75e-10!49;UBERON:0003056!1.12e-09!49;UBERON:0002791!1.21e-09!29;UBERON:0003528!1.21e-09!29;UBERON:0001893!1.21e-09!29;UBERON:0001017!1.33e-09!73;UBERON:0005743!1.33e-09!73;UBERON:0001049!1.57e-09!52;UBERON:0005068!1.57e-09!52;UBERON:0006241!1.57e-09!52;UBERON:0007135!1.57e-09!52;UBERON:0002346!2.85e-09!71;UBERON:0003075!2.85e-09!71;UBERON:0007284!2.85e-09!71;UBERON:0003080!2.98e-09!40;UBERON:0002780!3.92e-09!39;UBERON:0001890!3.92e-09!39;UBERON:0006240!3.92e-09!39;UBERON:0000073!4.82e-09!75;UBERON:0001016!4.82e-09!75;UBERON:0004121!5.73e-09!102;UBERON:0000924!5.73e-09!102;UBERON:0006601!5.73e-09!102;UBERON:0000956!1.90e-08!21;UBERON:0001869!1.90e-08!21;UBERON:0000203!1.90e-08!21;UBERON:0002021!4.53e-08!10;UBERON:0000411!4.53e-08!10;UBERON:0001950!4.53e-08!10;UBERON:0000475!5.17e-08!200;UBERON:0004111!2.21e-07!122;UBERON:0000153!3.19e-07!94;UBERON:0007811!3.24e-07!86;UBERON:0002619!3.46e-07!17;UBERON:0000025!3.61e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.88e-12,34;UBERON:0000073,1.64e-11,54;UBERON:0003528,2.61e-11,29;UBERON:0002791,2.61e-11,29;UBERON:0001893,2.61e-11,29;UBERON:0002021,9.29e-11,10;UBERON:0000411,9.29e-11,10;UBERON:0001950,9.29e-11,10;UBERON:0000956,3.30e-10,21;UBERON:0001869,3.30e-10,21;UBERON:0000203,3.30e-10,21;UBERON:0001049,3.33e-10,52;UBERON:0005068,3.33e-10,52;UBERON:0006241,3.33e-10,52;UBERON:0007135,3.33e-10,52;UBERON:0002346,9.50e-10,64;UBERON:0003075,9.50e-10,64;UBERON:0007284,9.50e-10,64;UBERON:0003080,9.64e-10,40;UBERON:0003056,1.30e-09,49;UBERON:0002780,1.44e-09,39;UBERON:0001890,1.44e-09,39;UBERON:0006240,1.44e-09,39;UBERON:0001017,3.69e-09,73;UBERON:0000955,3.91e-09,47;UBERON:0006238,3.91e-09,47;UBERON:0002616,9.80e-09,46;UBERON:0001016,1.45e-08,75;UBERON:0002619,1.95e-08,17;UBERON:0010371,1.63e-07,73;UBERON:0004111,2.02e-07,122;UBERON:0004121,2.39e-07,95;UBERON:0000924,2.39e-07,95;UBERON:0006601,2.39e-07,95;UBERON:0000025,2.44e-07,114|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0.171217968225505,0,0.684802919724823,0.174840804837995,0,0.607425802169478,0.699561878128147,0.630924330716475,0.137114433605739,0.84877930359606,0.935476191661768,0.297872853602656,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0,1.1330713617802,0.506884656097573,2.38610777810186,0,0.218025156380447,0.439372365468944,0.388859798148567,0.419959264876088,0,0.503347818173209,0,0.672187598284928,1.28629718017973,0.286533439938757,0.515672092277442,2.02316460859598,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0.768436610643109,1.14058573539325,1.4850653216486,1.68259969081106,0.285650984403804,0.441737081903227,0.979926393719632,0.479227355091182,4.5960939330501,5.50579404996943,1.78762273319263,3.84016333140609,0.659431438650969,1.46380229763855,0.52091337055676,1.11673199600552,1.68828783009504,2.13917546887534,4.12480019663135,3.27454865837937,2.42319279572891,0.530083353332288,0.151143120213571,0.289864488701678,0,0,0,1.29955283489534,0,0.421333260395256,0.681721290312231,0.259786004602869,1.06001872353102,0.281686839553361,0,0,0,1.29894624606728,1.01343946190039,0.505524445014783,0.11418387971906,0.517875767294343,0.445326417194474,0.867426633830679,0.304465478312141,0.461230994512117,1.05505848386836,1.64624189989987,0.125666591329675,0.494389935468748,0.722996784599558,0.884610551949874,1.45590164952668,1.32504911076236,0,0,0.878342391034642,2.09446706813455,0.255457055208591,0,0,0.127070227073065,1.04853447583376,1.37250180845588,1.7591609295801,2.43354048269187,1.79000820131231,1.24672826735736,1.62241263067758,3.36069900706044,1.11966273549084,1.76905930903572,0.841767423545896,0.910843100738926,0.229902104433473,0,1.9591626318643,2.24520447199382,1.66547836370305,0.843315521037559,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,1.53437012699302,2.50242524303038,0.696504333044333,1.23469281844766,1.39323986772945,0,0,0.284163499395593,0.621377317606506,1.40715635988658,1.2604344302271,0.23674473558521,0.393528463494808,0.925602677324269,3.25547522650571,0,0.817357396570186,0.493679549740441,1.80584210487005,0.405344047729279,0.292399974850665,0.439100230582101,0.671032093801859,1.68231958851302,2.05809224758569,0,0,0.853153002140936,1.62565670302307,0.38660238396628,0.403367049246685,1.55664630691409,0.570676878337677,0,1.81168850196412,0,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.189667900953082,1.48523066392647,1.1270773567308,3.46207257337034,3.68509725618489,2.10407459670956,0.7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|EntrezGene=74998
|HGNC=
|MCL_coexpression_id=884
|UniProt=G3XA57
|association_with_transcript=-74bp_to_ENSMUST00000170819_5end
|description=CAGE_peak_4_at_Rab11fip2_5end
|id=chr19:60018977..60019003,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.70e-10!63;UBERON:0002020!3.52e-10!34;UBERON:0000955!3.69e-10!50;UBERON:0006238!3.69e-10!50;UBERON:0002616!7.75e-10!49;UBERON:0003056!1.12e-09!49;UBERON:0002791!1.21e-09!29;UBERON:0003528!1.21e-09!29;UBERON:0001893!1.21e-09!29;UBERON:0001017!1.33e-09!73;UBERON:0005743!1.33e-09!73;UBERON:0001049!1.57e-09!52;UBERON:0005068!1.57e-09!52;UBERON:0006241!1.57e-09!52;UBERON:0007135!1.57e-09!52;UBERON:0002346!2.85e-09!71;UBERON:0003075!2.85e-09!71;UBERON:0007284!2.85e-09!71;UBERON:0003080!2.98e-09!40;UBERON:0002780!3.92e-09!39;UBERON:0001890!3.92e-09!39;UBERON:0006240!3.92e-09!39;UBERON:0000073!4.82e-09!75;UBERON:0001016!4.82e-09!75;UBERON:0004121!5.73e-09!102;UBERON:0000924!5.73e-09!102;UBERON:0006601!5.73e-09!102;UBERON:0000956!1.90e-08!21;UBERON:0001869!1.90e-08!21;UBERON:0000203!1.90e-08!21;UBERON:0002021!4.53e-08!10;UBERON:0000411!4.53e-08!10;UBERON:0001950!4.53e-08!10;UBERON:0000475!5.17e-08!200;UBERON:0004111!2.21e-07!122;UBERON:0000153!3.19e-07!94;UBERON:0007811!3.24e-07!86;UBERON:0002619!3.46e-07!17;UBERON:0000025!3.61e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.88e-12,34;UBERON:0000073,1.64e-11,54;UBERON:0003528,2.61e-11,29;UBERON:0002791,2.61e-11,29;UBERON:0001893,2.61e-11,29;UBERON:0002021,9.29e-11,10;UBERON:0000411,9.29e-11,10;UBERON:0001950,9.29e-11,10;UBERON:0000956,3.30e-10,21;UBERON:0001869,3.30e-10,21;UBERON:0000203,3.30e-10,21;UBERON:0001049,3.33e-10,52;UBERON:0005068,3.33e-10,52;UBERON:0006241,3.33e-10,52;UBERON:0007135,3.33e-10,52;UBERON:0002346,9.50e-10,64;UBERON:0003075,9.50e-10,64;UBERON:0007284,9.50e-10,64;UBERON:0003080,9.64e-10,40;UBERON:0003056,1.30e-09,49;UBERON:0002780,1.44e-09,39;UBERON:0001890,1.44e-09,39;UBERON:0006240,1.44e-09,39;UBERON:0001017,3.69e-09,73;UBERON:0000955,3.91e-09,47;UBERON:0006238,3.91e-09,47;UBERON:0002616,9.80e-09,46;UBERON:0001016,1.45e-08,75;UBERON:0002619,1.95e-08,17;UBERON:0010371,1.63e-07,73;UBERON:0004111,2.02e-07,122;UBERON:0004121,2.39e-07,95;UBERON:0000924,2.39e-07,95;UBERON:0006601,2.39e-07,95;UBERON:0000025,2.44e-07,114
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.516493293766305,0.140788722151667,0,0.171217968225505,0,0.684802919724823,0.174840804837995,0,0.607425802169478,0.699561878128147,0.630924330716475,0.137114433605739,0.84877930359606,0.935476191661768,0.297872853602656,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0.683045484958446,0,1.1330713617802,0.506884656097573,2.38610777810186,0,0.218025156380447,0.439372365468944,0.388859798148567,0.419959264876088,0,0.503347818173209,0,0.672187598284928,1.28629718017973,0.286533439938757,0.515672092277442,2.02316460859598,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0.768436610643109,1.14058573539325,1.4850653216486,1.68259969081106,0.285650984403804,0.441737081903227,0.979926393719632,0.479227355091182,4.5960939330501,5.50579404996943,1.78762273319263,3.84016333140609,0.659431438650969,1.46380229763855,0.52091337055676,1.11673199600552,1.68828783009504,2.13917546887534,4.12480019663135,3.27454865837937,2.42319279572891,0.530083353332288,0.151143120213571,0.289864488701678,0,0,0,1.29955283489534,0,0.421333260395256,0.681721290312231,0.259786004602869,1.06001872353102,0.281686839553361,0,0,0,1.29894624606728,1.01343946190039,0.505524445014783,0.11418387971906,0.517875767294343,0.445326417194474,0.867426633830679,0.304465478312141,0.461230994512117,1.05505848386836,1.64624189989987,0.125666591329675,0.494389935468748,0.722996784599558,0.884610551949874,1.45590164952668,1.32504911076236,0,0,0.878342391034642,2.09446706813455,0.255457055208591,0,0,0.127070227073065,1.04853447583376,1.37250180845588,1.7591609295801,2.43354048269187,1.79000820131231,1.24672826735736,1.62241263067758,3.36069900706044,1.11966273549084,1.76905930903572,0.841767423545896,0.910843100738926,0.229902104433473,0,1.9591626318643,2.24520447199382,1.66547836370305,0.843315521037559,2.32833033665114,0.215567992932842,0.189106080167819,0.527853372491847,1.53437012699302,2.50242524303038,0.696504333044333,1.23469281844766,1.39323986772945,0,0,0.284163499395593,0.621377317606506,1.40715635988658,1.2604344302271,0.23674473558521,0.393528463494808,0.925602677324269,3.25547522650571,0,0.817357396570186,0.493679549740441,1.80584210487005,0.405344047729279,0.292399974850665,0.439100230582101,0.671032093801859,1.68231958851302,2.05809224758569,0,0,0.853153002140936,1.62565670302307,0.38660238396628,0.403367049246685,1.55664630691409,0.570676878337677,0,1.81168850196412,0,0.397912944082302,0.58489226135736,0,0.216138049874694,0,0.189667900953082,1.48523066392647,1.1270773567308,3.46207257337034,3.68509725618489,2.10407459670956,0.758838445491087,1.62371162777562,1.56998727841375,0.863780147452604,0.592905254174298,0.333690211432188,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0.972811360650212,0.823684239564244,11.5014565221884,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,2.21703828199926,0,0.488894929326078,1.18821560042632,1.64283173801951,0.167506257441816,0.714130922658041,1.17080188714679,0.945810864637146,2.43611158613652,2.23236676120482,3.11340297959902,2.24490476425664,1.15719246865209,0,0,0.491764273019036,1.10374698521893,1.12385412991454,0.586058432961016,0.983609672260053,0.757412781613119,0.94652465824877,0.390438744296638,1.07711698866399,0.477937595905104,0.891194696329576,0.283076530788832,0.809621403349789,1.75353514746787,0.790575555893047,1.60660658210904,0.851640511249612,1.06839362200353,1.79175655288934,1.64970122972535,0,0.242780636154981,0.906970670894253,1.13163047853539,0.295301892880773,0.922305443831782,0.516856586336442,1.45413491791002,0.712994756769443,0.316036757935816,0,0,2.04263763452273,0.900305470156551,0.517434735131018,1.50035924522115,0.532020700926821,0.535106452806212,0.493647061806363,0.304464949114599,0.704015124191131,0.42366414172764,0,0.32977250588296,0.968786560175433,0.482503399425247,0.716234064018819,0.820704498725306,0.874442509889552,1.8542530201051,0.683483523191411,0.206386867963223,0.925972636848558,1.13021074202815,0.546776910884101,0,0,0,0.414599921413271,0,0,0.406638934253697,1.72808545314882,1.25452977608681,0.655087691238533,1.34864346384821,0.41326727862668,0.26175594198403,0.648074866458964,2.4853572523477,6.20062232552609,1.04661582230785,0.827292452285488,0.194451188344048,0.645799117388655,4.05494701177868,3.16864544343536,1.43224823328345,0.524296722128554,6.28118714147616,2.59227005632079,0.632022241256357,0.608175645870493,1.23253148597793,1.03936658382236,0.716106782669926,0.39736270956253,0.721172697119813,1.18151621739662,0.908698049533329,0.838274873204998,0.907435666231565,1.07203668813728,0.865906574762965,1.5193997283604,0.680191150845634,0,0.179427713218951,0,0.965947970160952,1.31377732815827,3.6630324853453,1.92931541171159,1.50471631210609,7.34177395402186,8.74617949363636,9.16632821503035,14.0919609521824,4.11049511862385,9.06472676867641,6.07520250208625,5.40385443869065,5.43770890781046,4.14208249401456,0.830298780673413,1.59609949360412,0.170733605754134,1.21553358534147,0.419226325255965,0,0.666740183404846,1.03017528619447,0.64183841918363,0.505394423527595,0,0.565879024158229,1.03005658216871,0.192075457214608,0.574354689556133,1.42888107384922,0.463537303779422,0,1.64834360321323,0.588795680537589,1.37147700954166,1.24233064311536,0.953744759789284,1.0174249164263,1.03520318456864,1.09998990259179,0.548783918618318,0.789209134313529,0.679020569229309,0.561142271657738,0.830445126869219,0.492522411877817,2.45538625901814,0.464810523557898,0,0.499621155875892,0.233931608445408,0.429742108096597,0.956441660344217,0.441182838239031,0.231867835620421
|short_description=p4@Rab11fip2
}}

Revision as of 18:17, 13 September 2013

Short description:p4@Rab11fip2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Rab11fip2_5end
Coexpression cluster:MCL_coexpression_mm9:884
Association with transcript: -74bp_to_ENSMUST00000170819_5end
EntrezGene:Rab11fip2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Rab11fip2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.49
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G56.20
testis, embryo E13.CNhs11031.389-23F51.05
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G54.05
testis, neonate N00.CNhs11189.1300-22B73.17
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.34
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter3.88e-1234
regional part of nervous system1.64e-1154
brain grey matter2.61e-1129
regional part of telencephalon2.61e-1129
telencephalon2.61e-1129
occipital lobe9.29e-1110
visual cortex9.29e-1110
neocortex9.29e-1110
cerebral cortex3.30e-1021
cerebral hemisphere3.30e-1021
pallium3.30e-1021
neural tube3.33e-1052
neural rod3.33e-1052
future spinal cord3.33e-1052
neural keel3.33e-1052
neurectoderm9.50e-1064
neural plate9.50e-1064
presumptive neural plate9.50e-1064
anterior neural tube9.64e-1040
pre-chordal neural plate1.30e-0949
regional part of forebrain1.44e-0939
forebrain1.44e-0939
future forebrain1.44e-0939
central nervous system3.69e-0973
brain3.91e-0947
future brain3.91e-0947
regional part of brain9.80e-0946
nervous system1.45e-0875
regional part of cerebral cortex1.95e-0817
ecto-epithelium1.63e-0773
anatomical conduit2.02e-07122
ectoderm-derived structure2.39e-0795
ectoderm2.39e-0795
presumptive ectoderm2.39e-0795
tube2.44e-07114







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