FFCP PHASE1:Mm9::chr13:33661179..33661193,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=50|UniProt=|association_with_transcript=0bp_to_uc007qaj.1_5end|description=CAGE_peak_1_at_uc007qaj.1_5end|id=chr13:33661179..33661193,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,1.06e-16,3;CL:0000737,1.06e-16,3;CL:0000746,1.06e-16,3;CL:0000513,1.06e-16,3;CL:0000878,1.48e-11,2;CL:0000129,1.48e-11,2;CL:0000680,1.29e-08,6;CL:0000187,1.29e-08,6;CL:0000056,1.29e-08,6;CL:0000222,1.88e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.46e-16,3;UBERON:0000478,2.46e-16,3;UBERON:0000158,2.46e-16,3;UBERON:0001987,3.86e-11,2;UBERON:0003124,3.86e-11,2;UBERON:0004340,3.86e-11,2;UBERON:0000305,7.38e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,146.95060777731,91.6811259877663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0.839918529752175,0,0,0,0,2.05807548828758,12.6074713573053,7.73508138416164,0,0,0,0.338844532069132,1.77858959222228,0,0.988866362566974,0,2.99600110518405,2.30530983192933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.377857800533928,0,0,2.03991400112325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21439728736295,2.13125834818499,0.922461989024234,0.150722640552623,0.117588707135705,0,85.7766538038277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0,0,0,0.350296027101508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,1.29708181420028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97432238583152,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,2.81606049676452,1.27099242518292,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.718976700153791,0,0.537080087002444,0.596044064343795,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0,0.320125762024346,0.402048282689293,0,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0,0.282328141245992,0.338458431566706,0,0,0,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,1.35034627686799,0,0.233931608445408,0,0,0,0|short_description=p1@uc007qaj.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc007qaj.1_5end | |||
|description=CAGE_peak_1_at_uc007qaj.1_5end | |||
|id=chr13:33661179..33661193,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.06e-16,3;CL:0000737,1.06e-16,3;CL:0000746,1.06e-16,3;CL:0000513,1.06e-16,3;CL:0000878,1.48e-11,2;CL:0000129,1.48e-11,2;CL:0000680,1.29e-08,6;CL:0000187,1.29e-08,6;CL:0000056,1.29e-08,6;CL:0000222,1.88e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.46e-16,3;UBERON:0000478,2.46e-16,3;UBERON:0000158,2.46e-16,3;UBERON:0001987,3.86e-11,2;UBERON:0003124,3.86e-11,2;UBERON:0004340,3.86e-11,2;UBERON:0000305,7.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,146.95060777731,91.6811259877663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0.839918529752175,0,0,0,0,2.05807548828758,12.6074713573053,7.73508138416164,0,0,0,0.338844532069132,1.77858959222228,0,0.988866362566974,0,2.99600110518405,2.30530983192933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.377857800533928,0,0,2.03991400112325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21439728736295,2.13125834818499,0.922461989024234,0.150722640552623,0.117588707135705,0,85.7766538038277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0.414251545071004,0,0,0.23674473558521,0.196764231747404,0,0,0,0.350296027101508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,1.29708181420028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97432238583152,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,2.81606049676452,1.27099242518292,0,0,0.161464426695906,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.718976700153791,0,0.537080087002444,0.596044064343795,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0,0.320125762024346,0.402048282689293,0,0.463537303779422,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0,0,0.282328141245992,0.338458431566706,0,0,0,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,1.35034627686799,0,0.233931608445408,0,0,0,0 | |||
|short_description=p1@uc007qaj.1 | |||
}} |
Revision as of 00:23, 13 September 2013
Short description: | p1@uc007qaj.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc007qaj.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | 0bp_to_uc007qaj.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.06e-16 | 3 |
striated muscle cell | 1.06e-16 | 3 |
cardiac muscle cell | 1.06e-16 | 3 |
cardiac muscle myoblast | 1.06e-16 | 3 |
central nervous system macrophage | 1.48e-11 | 2 |
microglial cell | 1.48e-11 | 2 |
muscle precursor cell | 1.29e-08 | 6 |
muscle cell | 1.29e-08 | 6 |
myoblast | 1.29e-08 | 6 |
mesodermal cell | 1.88e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.46e-16 | 3 |
extraembryonic structure | 2.46e-16 | 3 |
membranous layer | 2.46e-16 | 3 |
placenta | 3.86e-11 | 2 |
chorion | 3.86e-11 | 2 |
allantois | 3.86e-11 | 2 |
amnion | 7.38e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.