FFCP PHASE1:Mm9::chr10:55835128..55835190,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=0|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:55835128..55835190,+|id=chr10:55835128..55835190,+|ontology_enrichment_celltype=CL:0000117!2.70e-13!23;CL:0000337!2.70e-13!23;CL:0000221!3.05e-11!44;CL:0000133!3.05e-11!44;CL:0002319!3.60e-11!43;CL:0000540!4.39e-10!33;CL:0000047!4.39e-10!33;CL:0000031!4.39e-10!33;CL:0000404!4.39e-10!33;CL:0000055!4.68e-09!50;CL:0000393!6.13e-08!39;CL:0000211!6.13e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-15,23;CL:0000337,1.76e-15,23;CL:0000221,2.22e-12,44;CL:0000133,2.22e-12,44;CL:0002319,2.73e-12,43;CL:0000540,5.77e-11,33;CL:0000047,5.77e-11,33;CL:0000031,5.77e-11,33;CL:0000404,5.77e-11,33;CL:0000393,2.03e-09,39;CL:0000211,2.03e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.36e-27!75;UBERON:0001016!5.36e-27!75;UBERON:0001017!9.77e-27!73;UBERON:0005743!9.77e-27!73;UBERON:0000153!5.01e-26!94;UBERON:0007811!8.55e-26!86;UBERON:0001049!1.28e-25!52;UBERON:0005068!1.28e-25!52;UBERON:0006241!1.28e-25!52;UBERON:0007135!1.28e-25!52;UBERON:0002346!1.53e-25!71;UBERON:0003075!1.53e-25!71;UBERON:0007284!1.53e-25!71;UBERON:0000955!3.38e-24!50;UBERON:0006238!3.38e-24!50;UBERON:0004121!4.10e-24!102;UBERON:0000924!4.10e-24!102;UBERON:0006601!4.10e-24!102;UBERON:0002616!1.18e-23!49;UBERON:0000033!3.18e-23!63;UBERON:0003056!8.50e-20!49;UBERON:0003080!1.13e-19!40;UBERON:0002780!2.70e-19!39;UBERON:0001890!2.70e-19!39;UBERON:0006240!2.70e-19!39;UBERON:0002020!1.24e-18!34;UBERON:0002791!4.68e-16!29;UBERON:0003528!4.68e-16!29;UBERON:0001893!4.68e-16!29;UBERON:0000956!2.72e-11!21;UBERON:0001869!2.72e-11!21;UBERON:0000203!2.72e-11!21;UBERON:0002619!2.06e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.91e-31,75;UBERON:0000073,1.20e-30,54;UBERON:0001017,1.43e-30,73;UBERON:0001049,1.26e-29,52;UBERON:0005068,1.26e-29,52;UBERON:0006241,1.26e-29,52;UBERON:0007135,1.26e-29,52;UBERON:0002346,5.17e-29,64;UBERON:0003075,5.17e-29,64;UBERON:0007284,5.17e-29,64;UBERON:0004121,1.72e-26,95;UBERON:0000924,1.72e-26,95;UBERON:0006601,1.72e-26,95;UBERON:0000955,2.41e-26,47;UBERON:0006238,2.41e-26,47;UBERON:0002616,1.04e-25,46;UBERON:0010371,2.15e-25,73;UBERON:0010314,4.44e-23,92;UBERON:0003056,1.04e-22,49;UBERON:0003080,1.41e-22,40;UBERON:0002780,3.97e-22,39;UBERON:0001890,3.97e-22,39;UBERON:0006240,3.97e-22,39;UBERON:0002020,2.55e-21,34;UBERON:0003528,2.89e-18,29;UBERON:0002791,2.89e-18,29;UBERON:0001893,2.89e-18,29;UBERON:0000956,1.24e-12,21;UBERON:0001869,1.24e-12,21;UBERON:0000203,1.24e-12,21;UBERON:0002619,2.08e-10,17;UBERON:0002021,1.45e-07,10;UBERON:0000411,1.45e-07,10;UBERON:0001950,1.45e-07,10;UBERON:0003076,1.94e-07,12;UBERON:0003057,1.94e-07,12;UBERON:0002420,6.87e-07,8;UBERON:0007245,6.87e-07,8;UBERON:0010009,6.87e-07,8;UBERON:0010011,6.87e-07,8;UBERON:0000454,6.87e-07,8|phase1_expression=2.40223270657191,0,0,0,0,0,0,4.39019299701359,0.703943610758334,0.936258105287974,3.08192342805909,1.99430397488341,1.71200729931206,2.53519167015092,0,0.404950534779652,0,0.630924330716475,1.50825876966313,0,5.78294373027274,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12956537739216,1.96222640742402,2.85592037554813,0.777719596297134,3.07970127575798,0,0.503347818173209,1.45072428402269,0.672187598284928,1.28629718017973,2.57880095944881,1.03134418455488,3.64169629547276,9.52183762689659,7.60597684207415,2.71075625655306,4.4464739805557,0,0,2.8419204597844,3.29560121570245,2.30530983192933,3.52544681848824,4.59020190327748,3.99617426567626,4.85606673486466,5.07997644188711,6.1245399607477,4.79227355091182,10.1114066527102,2.20231761998777,4.59674417106676,3.22573719838111,6.19865552331911,6.77008562657831,2.6045668527838,4.74611098302348,6.75315132038016,4.73674568108111,3.24091444021034,3.13217697758026,4.28718725398191,1.96888102666279,1.20914496170857,0.869593466105033,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,1.40843419776681,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0.91347103775248,0.776813650941515,1.48442139064825,1.04091196059682,2.13125834818499,1.38369298353635,1.80867168663147,1.05829836422134,0.628332956648377,0.741584903203122,0.144599356919912,0,0.485300549842228,0.883366073841574,0.969750506270444,0,3.22058876712702,5.23616767033638,0.766371165625774,0.479260498023681,0.599902730993408,0.635351135365324,2.69623150928681,8.6925114535539,7.16229807043327,3.47648640384553,4.09144731728529,4.77912502486988,4.54275536589721,1.2220723662038,0.373220911830279,1.0108910337347,0.420883711772948,1.04096354370163,2.06911893990126,1.98068342785884,1.50704817835715,1.56483948048054,2.0498195245576,2.24884138943349,1.29351685369508,0.862271971731369,1.32374256117473,1.05570674498369,2.19195732427575,0.834141747676794,2.43776516565517,1.4404749548556,0.995171334092466,0,0,0.852490498186778,1.65700618028402,1.17263029990548,1.80062061461015,2.13070262026689,0.393528463494808,0.771335564436891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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:55835128..55835190,+ | |||
|id=chr10:55835128..55835190,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.70e-13!23;CL:0000337!2.70e-13!23;CL:0000221!3.05e-11!44;CL:0000133!3.05e-11!44;CL:0002319!3.60e-11!43;CL:0000540!4.39e-10!33;CL:0000047!4.39e-10!33;CL:0000031!4.39e-10!33;CL:0000404!4.39e-10!33;CL:0000055!4.68e-09!50;CL:0000393!6.13e-08!39;CL:0000211!6.13e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-15,23;CL:0000337,1.76e-15,23;CL:0000221,2.22e-12,44;CL:0000133,2.22e-12,44;CL:0002319,2.73e-12,43;CL:0000540,5.77e-11,33;CL:0000047,5.77e-11,33;CL:0000031,5.77e-11,33;CL:0000404,5.77e-11,33;CL:0000393,2.03e-09,39;CL:0000211,2.03e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.36e-27!75;UBERON:0001016!5.36e-27!75;UBERON:0001017!9.77e-27!73;UBERON:0005743!9.77e-27!73;UBERON:0000153!5.01e-26!94;UBERON:0007811!8.55e-26!86;UBERON:0001049!1.28e-25!52;UBERON:0005068!1.28e-25!52;UBERON:0006241!1.28e-25!52;UBERON:0007135!1.28e-25!52;UBERON:0002346!1.53e-25!71;UBERON:0003075!1.53e-25!71;UBERON:0007284!1.53e-25!71;UBERON:0000955!3.38e-24!50;UBERON:0006238!3.38e-24!50;UBERON:0004121!4.10e-24!102;UBERON:0000924!4.10e-24!102;UBERON:0006601!4.10e-24!102;UBERON:0002616!1.18e-23!49;UBERON:0000033!3.18e-23!63;UBERON:0003056!8.50e-20!49;UBERON:0003080!1.13e-19!40;UBERON:0002780!2.70e-19!39;UBERON:0001890!2.70e-19!39;UBERON:0006240!2.70e-19!39;UBERON:0002020!1.24e-18!34;UBERON:0002791!4.68e-16!29;UBERON:0003528!4.68e-16!29;UBERON:0001893!4.68e-16!29;UBERON:0000956!2.72e-11!21;UBERON:0001869!2.72e-11!21;UBERON:0000203!2.72e-11!21;UBERON:0002619!2.06e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.91e-31,75;UBERON:0000073,1.20e-30,54;UBERON:0001017,1.43e-30,73;UBERON:0001049,1.26e-29,52;UBERON:0005068,1.26e-29,52;UBERON:0006241,1.26e-29,52;UBERON:0007135,1.26e-29,52;UBERON:0002346,5.17e-29,64;UBERON:0003075,5.17e-29,64;UBERON:0007284,5.17e-29,64;UBERON:0004121,1.72e-26,95;UBERON:0000924,1.72e-26,95;UBERON:0006601,1.72e-26,95;UBERON:0000955,2.41e-26,47;UBERON:0006238,2.41e-26,47;UBERON:0002616,1.04e-25,46;UBERON:0010371,2.15e-25,73;UBERON:0010314,4.44e-23,92;UBERON:0003056,1.04e-22,49;UBERON:0003080,1.41e-22,40;UBERON:0002780,3.97e-22,39;UBERON:0001890,3.97e-22,39;UBERON:0006240,3.97e-22,39;UBERON:0002020,2.55e-21,34;UBERON:0003528,2.89e-18,29;UBERON:0002791,2.89e-18,29;UBERON:0001893,2.89e-18,29;UBERON:0000956,1.24e-12,21;UBERON:0001869,1.24e-12,21;UBERON:0000203,1.24e-12,21;UBERON:0002619,2.08e-10,17;UBERON:0002021,1.45e-07,10;UBERON:0000411,1.45e-07,10;UBERON:0001950,1.45e-07,10;UBERON:0003076,1.94e-07,12;UBERON:0003057,1.94e-07,12;UBERON:0002420,6.87e-07,8;UBERON:0007245,6.87e-07,8;UBERON:0010009,6.87e-07,8;UBERON:0010011,6.87e-07,8;UBERON:0000454,6.87e-07,8 | |||
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| |||
|short_description=p@chr10:55835128..55835190,+ | |||
}} |
Revision as of 16:54, 12 September 2013
Short description: | p@chr10:55835128..55835190, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:55835128..55835190, + |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.76e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-15 | 23 |
ectodermal cell | 2.22e-12 | 44 |
neurectodermal cell | 2.22e-12 | 44 |
neural cell | 2.73e-12 | 43 |
neuron | 5.77e-11 | 33 |
neuronal stem cell | 5.77e-11 | 33 |
neuroblast | 5.77e-11 | 33 |
electrically signaling cell | 5.77e-11 | 33 |
electrically responsive cell | 2.03e-09 | 39 |
electrically active cell | 2.03e-09 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.