FFCP PHASE1:Mm9::chr14:52723690..52723701,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15381|HGNC=|MCL_coexpression_id=770|UniProt=Q9Z204|association_with_transcript=1bp_to_ENSMUST00000111610,ENSMUST00000164655,NM_001170981,NM_001170982,NM_001170983,NM_001170984,NM_016884,uc007tob.2,uc007toc.2,uc007tod.2,uc007toe.2,uc007tof.2,uc007tog.2,uc007toh.2_5end|description=CAGE_peak_2_at_Hnrnpc_5end|id=chr14:52723690..52723701,-|ontology_enrichment_celltype=CL:0000542!8.95e-08!13;CL:0000051!8.95e-08!13;CL:0000838!4.11e-07!12|ontology_enrichment_celltype_v019_2=CL:0000542,8.95e-08,13;CL:0000051,8.95e-08,13;CL:0000838,4.11e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=16.4953312517938,4.53668029931169,2.27499619694768,4.23449895829562,3.00537437967808,9.40123922706583,4.67225281191051,18.3355119287038,29.2840542075467,23.4064526321993,22.9432077422177,21.0598499747688,13.353656934634,18.3582845079895,8.32774404539157,13.7683181825082,7.69518065940961,12.4607555316504,13.9856722277854,11.4585205985468,11.4808441703944,17.0780436065523,21.1571829202538,8.79958325363737,6.8822784320151,6.31655160526522,10.7690499039769,11.635446565038,5.89072600314759,8.82105454159758,7.53883736228036,5.08024538767705,7.38077745101484,0,14.4425809875637,17.4546377626417,12.6585000882669,11.3003540298965,17.9707129240474,20.9409497589519,30.5880373776127,24.589637458504,28.6451108288381,9.19046771221714,9.42805460341485,13.5824596599644,0.782391344348039,5.66865406589161,6.37089929929968,6.22175677037707,10.0790223570261,7.18762821824858,22.6506518177944,15.2326049822382,13.1076581665561,7.20326420900652,6.30373567865265,9.28209766099396,15.578367486189,12.6957835025288,17.1134478946668,4.06613438482959,3.55717918444456,7.19919773825119,4.94433181283487,0,3.89480143673926,5.37905627450176,19.9084055632277,15.5256829081444,15.5640471400023,9.99778445413313,9.05561017901615,18.3736198822431,26.5491954720515,13.7882817991503,9.91042928994498,13.1517958227743,13.2101618600369,14.1118327871307,25.4335649214699,19.7947080811569,11.725685958058,12.380777420697,12.835052813252,5.30331453852602,10.3931326983345,12.1159639786445,23.7780247066198,16.7768863437064,8.40607017234866,4.30211938490693,6.11974200336975,5.93673510801599,3.24888208723835,5.37632264516803,7.3031098468511,17.3838929029619,13.768658243952,11.6602059588412,13.9434985578914,10.2661181931454,0,7.11066703153331,13.6389355837065,12.4146334082798,14.1546844604139,7.07940054258172,19.1614033898907,8.31275978763019,13.1848848342263,8.52503339273995,9.91646638201052,12.5099791658677,6.82014501387088,8.54532821041793,4.20231445148436,4.33798070759735,10.6153266233985,8.25010934731787,6.62524555381181,7.27312879702833,3.72783522436244,7.90508151931177,7.33063473847093,5.10914110417183,23.3639492786545,16.197373736822,20.8395172399826,7.78911324905078,4.57500602818627,12.5654352112864,9.73416193076748,5.11430914660661,8.72709787150152,7.78758062725237,9.980257657331,7.46441823660558,6.31806896084187,6.52369753248069,20.1686686592191,19.3117767724117,19.2666478891724,17.0296444154358,11.5662048557257,9.48041530107888,14.7111707558774,4.13925393182425,26.0837271448739,20.8016688184601,16.0115522989193,11.6173738186615,11.3999372182495,10.0993128291428,6.79081050146213,13.733364410476,14.7464769335779,20.8451804762919,17.9023004619223,14.2916783049496,12.6644072389792,12.244220179349,8.28606574548236,12.3961466000864,14.1925743856388,9.53389173476672,8.85302224618743,8.64063533517054,8.72167204541446,6.895033491322,5.18840381093477,3.94739966048397,4.39100230582101,4.42881181909227,10.3042074796422,9.2614151141356,5.94753809370836,4.7601101999438,26.2344548158338,20.2045904518582,14.6908905907186,10.6892268050372,8.45036566610507,6.65789691393957,6.64340686162316,6.42325923423642,5.7807098024062,6.76452004939913,4.28920991662064,3.59527763461689,6.91641759599022,5.77509692437665,20.863469104839,17.5942709418982,14.6520056375005,6.31319116320474,10.2794818198842,8.27602674705759,6.63983639804701,3.98547399544926,5.80895293013087,4.93588655687202,5.33614728756868,14.3486790915841,11.0073037263394,11.9176919563972,9.33156558387113,11.576503668116,9.42115651591253,7.19240343627027,6.48540907100142,11.5315793538994,2.87536413054709,4.83783231969054,7.17686648163489,3.78868316920668,2.87035861635059,2.8946611281802,9.60716588866344,21.4125295300648,14.8298128562244,13.7493519477902,13.6120344007331,10.887906733718,6.9032655856944,5.26860849216057,6.77831119656621,12.6234873099802,8.77001227616179,8.35702905050264,9.67035898449015,8.67894351489069,7.53956419696361,6.52686820582452,11.3105782794378,7.17435540392304,8.50918126935297,8.90808818100744,10.3279015587306,4.03953483526997,9.14973836307144,7.02789739733949,8.83235930704476,6.93009514062401,8.24355094104858,9.34152551603147,4.04810701674894,7.3063964477828,3.95287777946523,9.63963949265421,7.2389443456217,15.1355763117167,7.00413925220377,9.73323725537959,3.98235415019888,14.3240575331439,13.906883620378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| ||
|EntrezGene=15381 | |||
|HGNC= | |||
|MCL_coexpression_id=770 | |||
|UniProt=Q9Z204 | |||
|association_with_transcript=1bp_to_ENSMUST00000111610,ENSMUST00000164655,NM_001170981,NM_001170982,NM_001170983,NM_001170984,NM_016884,uc007tob.2,uc007toc.2,uc007tod.2,uc007toe.2,uc007tof.2,uc007tog.2,uc007toh.2_5end | |||
|description=CAGE_peak_2_at_Hnrnpc_5end | |||
|id=chr14:52723690..52723701,- | |||
|ontology_enrichment_celltype=CL:0000542!8.95e-08!13;CL:0000051!8.95e-08!13;CL:0000838!4.11e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.95e-08,13;CL:0000051,8.95e-08,13;CL:0000838,4.11e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=16.4953312517938,4.53668029931169,2.27499619694768,4.23449895829562,3.00537437967808,9.40123922706583,4.67225281191051,18.3355119287038,29.2840542075467,23.4064526321993,22.9432077422177,21.0598499747688,13.353656934634,18.3582845079895,8.32774404539157,13.7683181825082,7.69518065940961,12.4607555316504,13.9856722277854,11.4585205985468,11.4808441703944,17.0780436065523,21.1571829202538,8.79958325363737,6.8822784320151,6.31655160526522,10.7690499039769,11.635446565038,5.89072600314759,8.82105454159758,7.53883736228036,5.08024538767705,7.38077745101484,0,14.4425809875637,17.4546377626417,12.6585000882669,11.3003540298965,17.9707129240474,20.9409497589519,30.5880373776127,24.589637458504,28.6451108288381,9.19046771221714,9.42805460341485,13.5824596599644,0.782391344348039,5.66865406589161,6.37089929929968,6.22175677037707,10.0790223570261,7.18762821824858,22.6506518177944,15.2326049822382,13.1076581665561,7.20326420900652,6.30373567865265,9.28209766099396,15.578367486189,12.6957835025288,17.1134478946668,4.06613438482959,3.55717918444456,7.19919773825119,4.94433181283487,0,3.89480143673926,5.37905627450176,19.9084055632277,15.5256829081444,15.5640471400023,9.99778445413313,9.05561017901615,18.3736198822431,26.5491954720515,13.7882817991503,9.91042928994498,13.1517958227743,13.2101618600369,14.1118327871307,25.4335649214699,19.7947080811569,11.725685958058,12.380777420697,12.835052813252,5.30331453852602,10.3931326983345,12.1159639786445,23.7780247066198,16.7768863437064,8.40607017234866,4.30211938490693,6.11974200336975,5.93673510801599,3.24888208723835,5.37632264516803,7.3031098468511,17.3838929029619,13.768658243952,11.6602059588412,13.9434985578914,10.2661181931454,0,7.11066703153331,13.6389355837065,12.4146334082798,14.1546844604139,7.07940054258172,19.1614033898907,8.31275978763019,13.1848848342263,8.52503339273995,9.91646638201052,12.5099791658677,6.82014501387088,8.54532821041793,4.20231445148436,4.33798070759735,10.6153266233985,8.25010934731787,6.62524555381181,7.27312879702833,3.72783522436244,7.90508151931177,7.33063473847093,5.10914110417183,23.3639492786545,16.197373736822,20.8395172399826,7.78911324905078,4.57500602818627,12.5654352112864,9.73416193076748,5.11430914660661,8.72709787150152,7.78758062725237,9.980257657331,7.46441823660558,6.31806896084187,6.52369753248069,20.1686686592191,19.3117767724117,19.2666478891724,17.0296444154358,11.5662048557257,9.48041530107888,14.7111707558774,4.13925393182425,26.0837271448739,20.8016688184601,16.0115522989193,11.6173738186615,11.3999372182495,10.0993128291428,6.79081050146213,13.733364410476,14.7464769335779,20.8451804762919,17.9023004619223,14.2916783049496,12.6644072389792,12.244220179349,8.28606574548236,12.3961466000864,14.1925743856388,9.53389173476672,8.85302224618743,8.64063533517054,8.72167204541446,6.895033491322,5.18840381093477,3.94739966048397,4.39100230582101,4.42881181909227,10.3042074796422,9.2614151141356,5.94753809370836,4.7601101999438,26.2344548158338,20.2045904518582,14.6908905907186,10.6892268050372,8.45036566610507,6.65789691393957,6.64340686162316,6.42325923423642,5.7807098024062,6.76452004939913,4.28920991662064,3.59527763461689,6.91641759599022,5.77509692437665,20.863469104839,17.5942709418982,14.6520056375005,6.31319116320474,10.2794818198842,8.27602674705759,6.63983639804701,3.98547399544926,5.80895293013087,4.93588655687202,5.33614728756868,14.3486790915841,11.0073037263394,11.9176919563972,9.33156558387113,11.576503668116,9.42115651591253,7.19240343627027,6.48540907100142,11.5315793538994,2.87536413054709,4.83783231969054,7.17686648163489,3.78868316920668,2.87035861635059,2.8946611281802,9.60716588866344,21.4125295300648,14.8298128562244,13.7493519477902,13.6120344007331,10.887906733718,6.9032655856944,5.26860849216057,6.77831119656621,12.6234873099802,8.77001227616179,8.35702905050264,9.67035898449015,8.67894351489069,7.53956419696361,6.52686820582452,11.3105782794378,7.17435540392304,8.50918126935297,8.90808818100744,10.3279015587306,4.03953483526997,9.14973836307144,7.02789739733949,8.83235930704476,6.93009514062401,8.24355094104858,9.34152551603147,4.04810701674894,7.3063964477828,3.95287777946523,9.63963949265421,7.2389443456217,15.1355763117167,7.00413925220377,9.73323725537959,3.98235415019888,14.3240575331439,13.9068836203785,7.16699303072413,7.08724542913855,7.99331384654211,3.6179961043551,9.08834323693764,4.9909632973861,8.53299246426703,8.4334886859999,8.25084345985495,8.5109901438447,17.2858650270058,14.6175312674513,15.8609405923378,8.6896714484714,12.664186049747,9.70839221552514,6.69822888052118,10.0908834467395,10.8034356140548,8.82113592219848,6.92522262354216,4.52100394748536,8.7453741145826,6.56547892017251,5.41664969158702,5.82961673259701,10.0129663085675,9.7396402054776,13.002372681683,17.0378965180135,13.3741604473331,10.1153728513559,14.870581258424,19.5475194492934,17.4939315404573,18.2423965421839,3.81868247206045,17.8729836373341,12.1991680276109,14.0406943068342,10.4544148007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| |||
|short_description=p2@Hnrnpc | |||
}} | |||
Revision as of 02:17, 13 September 2013
| Short description: | p2@Hnrnpc |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Hnrnpc_5end |
| Coexpression cluster: | MCL_coexpression_mm9:770 |
| Association with transcript: | 1bp_to_ENSMUST00000111610, ENSMUST00000164655, NM_001170981, NM_001170982, NM_001170983, NM_001170984, NM_016884, uc007tob.2, uc007toc.2, uc007tod.2, uc007toe.2, uc007tof.2, uc007tog.2, uc007toh.2_5end |
| EntrezGene: | Hnrnpc |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphocyte | 8.95e-08 | 13 |
| common lymphoid progenitor | 8.95e-08 | 13 |
| lymphoid lineage restricted progenitor cell | 4.11e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
