FFCP PHASE1:Mm9::chr11:117193712..117193715,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53860|HGNC=|UniProt=|association_with_transcript=-26bp_to_ENSMUST00000155331_5end|description=CAGE_peak_21_at_Sept9_5end|id=chr11:117193712..117193715,+|ontology_enrichment_celltype=CL:0000333!4.94e-07!10;CL:0000095!4.94e-07!10;CL:0000243!4.94e-07!10;CL:0000123!4.94e-07!10;CL:0000125!4.94e-07!10;CL:0000030!4.94e-07!10;CL:0000339!4.94e-07!10|ontology_enrichment_celltype_v019_2=CL:0002453,7.84e-18,8;CL:0000128,2.85e-14,6;CL:0000126,2.85e-14,6;CL:0000127,2.85e-14,6;CL:0000219,4.79e-14,54;CL:0000333,5.71e-14,10;CL:0000095,5.71e-14,10;CL:0000243,5.71e-14,10;CL:0000123,5.71e-14,10;CL:0000125,5.71e-14,10;CL:0000030,5.71e-14,10;CL:0000339,5.71e-14,10;CL:0000738,2.85e-09,17;CL:0002087,2.85e-09,17;CL:0000988,6.33e-09,32;CL:0002032,6.33e-09,32;CL:0000037,6.33e-09,32;CL:0000837,6.33e-09,32;CL:0000542,7.94e-08,13;CL:0000051,7.94e-08,13;CL:0002320,9.36e-08,46;CL:0000134,9.36e-08,46;CL:0000557,2.13e-07,7;CL:0000084,3.41e-07,11;CL:0000827,3.41e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.36e-08,46|phase1_expression=0,0,0,0,0,0.16787927191189,0,2.58246646883153,0.281577444303333,0,0.171217968225505,0.398860794976682,1.36960583944965,2.09808965805594,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0,0,1.78723712161594,2.08959831311148,0,0.45881856213434,0,0,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0.837063261473815,2.3440060335714,0.523523743973798,0.588231488031014,2.04913645487534,0.971020706062307,0.125896817975577,0,0,2.34717403304412,3.2703773457067,2.63623419281366,1.94429899074283,1.25987779462826,2.87505128729943,0.167782606057736,2.17608642603403,0.672187598284928,0.771778308107841,0,0,0.809265843438391,2.64495489636016,0,4.74382344896785,3.55717918444456,0,0.988866362566974,0,1.19840044207362,1.92109152660777,0.725827286159344,0.270011876663381,0.420649922702764,0.856952953211411,1.10434270475807,0.489963196859816,0.670918297127655,0,0,0,0,1.18697658957174,0.731901148819277,0.52091337055676,0,0,0,0,0.854230084794618,0.372798891650601,0.530083353332288,0.831287161174641,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,1.31796636956512,0.599902730993408,0.254140454146129,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0.162241263067758,0.305518091550949,0.373220911830279,0.252722758433675,0,0.910843100738926,0.689706313300419,0.540186389416048,0.30140963567143,0.476255494059295,0.12811372028485,0.655912071918102,0.258703370739016,0.646703978798527,0.378212160335639,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,1.40442637462647,1.28673953557358,1.42081749697796,0.828503090142008,0.234526059981096,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.205809224758569,0.660837565967596,0,1.2797295032114,0.464473343720877,2.83508414908605,2.01683524623343,1.33426826306922,0.190225626112559,0,0.494096864172033,0,0.795825888164603,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.899448449539415,0.811440485554012,0.241177159752417,0,0.863088412352432,0.324270453550071,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0,0.585400943573396,0,0.664394068946325,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0.94652465824877,0.390438744296638,0,0,1.33679204449436,0.566153061577665,0.809621403349789,0.584511715822624,1.58115111178609,0,0.283880170416537,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,1.29358683782755,0.857348140126369,1.77340233642274,0.891844088010353,0.822745103010605,0.304464949114599,2.3467170806371,0.63549621259146,0,0.16488625294148,0.484393280087717,0.422190474497091,0.238744688006273,0.328281799490123,0,0.18542530201051,0.683483523191411,0,0.370389054739423,0.376736914009382,0,0,0.509935289981566,0.559805809294632,0.138199973804424,0.954670618015114,0.474503990371703,0.406638934253697,0,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,1.57053565190418,0.259229946583586,0,0,0.598066184175915,0.827292452285488,0,0.258319646955462,0,0.352071715937262,0,0,0,0,0.632022241256357,1.82452693761148,1.1298205288131,0.51968329191118,0.358053391334963,0.39736270956253,1.56254084375959,0.886137163047463,0.403865799792591,0.914481679859998,1.20991422164209,0.779663045918019,0.481059208201647,0.935015217452552,0,0.887943813496259,0.358855426437903,0.503653849092235,0,0.187682475451182,0,0,0,0,0,1.145791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| ||
|EntrezGene=53860 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-26bp_to_ENSMUST00000155331_5end | |||
|description=CAGE_peak_21_at_Sept9_5end | |||
|id=chr11:117193712..117193715,+ | |||
|ontology_enrichment_celltype=CL:0000333!4.94e-07!10;CL:0000095!4.94e-07!10;CL:0000243!4.94e-07!10;CL:0000123!4.94e-07!10;CL:0000125!4.94e-07!10;CL:0000030!4.94e-07!10;CL:0000339!4.94e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,7.84e-18,8;CL:0000128,2.85e-14,6;CL:0000126,2.85e-14,6;CL:0000127,2.85e-14,6;CL:0000219,4.79e-14,54;CL:0000333,5.71e-14,10;CL:0000095,5.71e-14,10;CL:0000243,5.71e-14,10;CL:0000123,5.71e-14,10;CL:0000125,5.71e-14,10;CL:0000030,5.71e-14,10;CL:0000339,5.71e-14,10;CL:0000738,2.85e-09,17;CL:0002087,2.85e-09,17;CL:0000988,6.33e-09,32;CL:0002032,6.33e-09,32;CL:0000037,6.33e-09,32;CL:0000837,6.33e-09,32;CL:0000542,7.94e-08,13;CL:0000051,7.94e-08,13;CL:0002320,9.36e-08,46;CL:0000134,9.36e-08,46;CL:0000557,2.13e-07,7;CL:0000084,3.41e-07,11;CL:0000827,3.41e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.36e-08,46 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,2.58246646883153,0.281577444303333,0,0.171217968225505,0.398860794976682,1.36960583944965,2.09808965805594,0.333109761815663,0,0,0.315462165358238,0.274228867211478,0,0,1.78723712161594,2.08959831311148,0,0.45881856213434,0,0,0.215471232685889,0,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0.837063261473815,2.3440060335714,0.523523743973798,0.588231488031014,2.04913645487534,0.971020706062307,0.125896817975577,0,0,2.34717403304412,3.2703773457067,2.63623419281366,1.94429899074283,1.25987779462826,2.87505128729943,0.167782606057736,2.17608642603403,0.672187598284928,0.771778308107841,0,0,0.809265843438391,2.64495489636016,0,4.74382344896785,3.55717918444456,0,0.988866362566974,0,1.19840044207362,1.92109152660777,0.725827286159344,0.270011876663381,0.420649922702764,0.856952953211411,1.10434270475807,0.489963196859816,0.670918297127655,0,0,0,0,1.18697658957174,0.731901148819277,0.52091337055676,0,0,0,0,0.854230084794618,0.372798891650601,0.530083353332288,0.831287161174641,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0.461230994512117,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0,1.31796636956512,0.599902730993408,0.254140454146129,0,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0.162241263067758,0.305518091550949,0.373220911830279,0.252722758433675,0,0.910843100738926,0.689706313300419,0.540186389416048,0.30140963567143,0.476255494059295,0.12811372028485,0.655912071918102,0.258703370739016,0.646703978798527,0.378212160335639,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,1.40442637462647,1.28673953557358,1.42081749697796,0.828503090142008,0.234526059981096,0.180062061461015,0.473489471170421,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,0.420579897128254,0.205809224758569,0.660837565967596,0,1.2797295032114,0.464473343720877,2.83508414908605,2.01683524623343,1.33426826306922,0.190225626112559,0,0.494096864172033,0,0.795825888164603,0,0,0,0,0.379335801906163,0.342745537829186,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.899448449539415,0.811440485554012,0.241177159752417,0,0.863088412352432,0.324270453550071,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0,0.585400943573396,0,0.664394068946325,0,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0.94652465824877,0.390438744296638,0,0,1.33679204449436,0.566153061577665,0.809621403349789,0.584511715822624,1.58115111178609,0,0.283880170416537,0.178065603667255,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0.36012218806262,1.29358683782755,0.857348140126369,1.77340233642274,0.891844088010353,0.822745103010605,0.304464949114599,2.3467170806371,0.63549621259146,0,0.16488625294148,0.484393280087717,0.422190474497091,0.238744688006273,0.328281799490123,0,0.18542530201051,0.683483523191411,0,0.370389054739423,0.376736914009382,0,0,0.509935289981566,0.559805809294632,0.138199973804424,0.954670618015114,0.474503990371703,0.406638934253697,0,0.209088296014469,0.218362563746178,0.404593039154462,0.247960367176008,1.57053565190418,0.259229946583586,0,0,0.598066184175915,0.827292452285488,0,0.258319646955462,0,0.352071715937262,0,0,0,0,0.632022241256357,1.82452693761148,1.1298205288131,0.51968329191118,0.358053391334963,0.39736270956253,1.56254084375959,0.886137163047463,0.403865799792591,0.914481679859998,1.20991422164209,0.779663045918019,0.481059208201647,0.935015217452552,0,0.887943813496259,0.358855426437903,0.503653849092235,0,0.187682475451182,0,0,0,0,0,1.14579102687879,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0.726511433089237,0.798049746802062,0.170733605754134,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.962757628775446,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.229741875822453,0.476293691283074,0.579421629724277,0.38581844092741,0,0.441596760403192,0,0,0,0.290692833264657,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0.249810577937946,0.233931608445408,1.28922632428979,0,0.220591419119515,0 | |||
|short_description=p21@Sept9 | |||
}} |
Revision as of 18:55, 12 September 2013
Short description: | p21@Sept9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_Sept9_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENSMUST00000155331_5end |
EntrezGene: | Sept9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 7.84e-18 | 8 |
oligodendrocyte | 2.85e-14 | 6 |
macroglial cell | 2.85e-14 | 6 |
astrocyte | 2.85e-14 | 6 |
motile cell | 4.79e-14 | 54 |
migratory neural crest cell | 5.71e-14 | 10 |
neuron associated cell | 5.71e-14 | 10 |
glial cell (sensu Vertebrata) | 5.71e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 5.71e-14 | 10 |
glial cell | 5.71e-14 | 10 |
glioblast | 5.71e-14 | 10 |
glioblast (sensu Vertebrata) | 5.71e-14 | 10 |
leukocyte | 2.85e-09 | 17 |
nongranular leukocyte | 2.85e-09 | 17 |
hematopoietic cell | 6.33e-09 | 32 |
hematopoietic oligopotent progenitor cell | 6.33e-09 | 32 |
hematopoietic stem cell | 6.33e-09 | 32 |
hematopoietic multipotent progenitor cell | 6.33e-09 | 32 |
lymphocyte | 7.94e-08 | 13 |
common lymphoid progenitor | 7.94e-08 | 13 |
connective tissue cell | 9.36e-08 | 46 |
mesenchymal cell | 9.36e-08 | 46 |
granulocyte monocyte progenitor cell | 2.13e-07 | 7 |
T cell | 3.41e-07 | 11 |
pro-T cell | 3.41e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.36e-08 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.