FFCP PHASE1:Mm9::chr7:54051521..54051526,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14884|HGNC=|MCL_coexpression_id=114|UniProt=E9PWY2|association_with_transcript=37bp_to_ENSMUST00000165031_5end|description=CAGE_peak_4_at_Gtf2h1_5end|id=chr7:54051521..54051526,+|ontology_enrichment_celltype=CL:0000107!1.73e-09!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.80e-39,9;CL:0000034,1.36e-11,97;CL:0000540,8.56e-10,33;CL:0000047,8.56e-10,33;CL:0000031,8.56e-10,33;CL:0000404,8.56e-10,33;CL:0000723,1.27e-09,91;CL:0000048,1.27e-09,91;CL:0000393,4.49e-08,39;CL:0000211,4.49e-08,39;CL:0002319,3.41e-07,43;CL:0000221,5.34e-07,44;CL:0000133,5.34e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.30e-10!11;UBERON:0002410!1.73e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.80e-39,9;UBERON:0000010,4.54e-32,11;UBERON:0000013,2.20e-14,3;UBERON:0010313,2.20e-14,3;UBERON:0002342,2.20e-14,3;UBERON:0002005,2.20e-14,3;UBERON:0005428,2.20e-14,3;UBERON:0005062,2.20e-14,3;UBERON:0000011,7.30e-14,3|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,1.20985684522732,0,0.16787927191189,0.233612640595526,0.258246646883153,1.267098499365,2.57470978954193,0.34243593645101,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0.204169356262369,0.418531630736908,0,1.57057123192139,1.17646297606203,0.683045484958446,0.485510353031154,0.629484089877886,0.506884656097573,0.183546752161682,0,0,0,0,0,0,0.671130424230945,1.45072428402269,0.672187598284928,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420649922702764,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.186399445825301,0.605809546665472,0.453429360640713,2.02905142091174,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0,0.517875767294343,0,0,0,0,0,0,0.251333182659351,1.23597483867187,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.772043721344145,0.568326998791185,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0.308713837137853,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.380451252225118,0,0.494096864172033,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0.35163505977661,0,0,4.41711507182759,5.0757036758563,7.32439552291516,4.06246956519338,3.34198011123591,2.83076530788832,5.66734982344852,3.50707029493574,7.90575555893047,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0.469343416127421,0.42366414172764,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0.509935289981566,0.979660166265606,0.276399947608848,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.943734099831398,0.483168241652012,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0,0,1.10992976687032,1.25599399253266,0.671538465456314,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0,0,0.44449345560323,0,0,0.252697211763798,0,0,0.280924522409647,0,0.17230640686684,0,0,0,0.412085900803307,0.294397840268795,0,0,0,0.145346416632329,0.282328141245992,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0,0|short_description=p4@Gtf2h1}} | ||
|EntrezGene=14884 | |||
|HGNC= | |||
|MCL_coexpression_id=114 | |||
|UniProt=E9PWY2 | |||
|association_with_transcript=37bp_to_ENSMUST00000165031_5end | |||
|description=CAGE_peak_4_at_Gtf2h1_5end | |||
|id=chr7:54051521..54051526,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.73e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.80e-39,9;CL:0000034,1.36e-11,97;CL:0000540,8.56e-10,33;CL:0000047,8.56e-10,33;CL:0000031,8.56e-10,33;CL:0000404,8.56e-10,33;CL:0000723,1.27e-09,91;CL:0000048,1.27e-09,91;CL:0000393,4.49e-08,39;CL:0000211,4.49e-08,39;CL:0002319,3.41e-07,43;CL:0000221,5.34e-07,44;CL:0000133,5.34e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.30e-10!11;UBERON:0002410!1.73e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.80e-39,9;UBERON:0000010,4.54e-32,11;UBERON:0000013,2.20e-14,3;UBERON:0010313,2.20e-14,3;UBERON:0002342,2.20e-14,3;UBERON:0002005,2.20e-14,3;UBERON:0005428,2.20e-14,3;UBERON:0005062,2.20e-14,3;UBERON:0000011,7.30e-14,3 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.909998478779072,1.20985684522732,0,0.16787927191189,0.233612640595526,0.258246646883153,1.267098499365,2.57470978954193,0.34243593645101,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0.261199789138935,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0.204169356262369,0.418531630736908,0,1.57057123192139,1.17646297606203,0.683045484958446,0.485510353031154,0.629484089877886,0.506884656097573,0.183546752161682,0,0,0,0,0,0,0.671130424230945,1.45072428402269,0.672187598284928,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420649922702764,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0.186399445825301,0.605809546665472,0.453429360640713,2.02905142091174,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0,0.517875767294343,0,0,0,0,0,0,0.251333182659351,1.23597483867187,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.648965052271031,0.101839363850316,0.124406970610093,0,0,0,0,0.180062129805349,0,0,0,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0.772043721344145,0.568326998791185,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0,0.232533944750408,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,0,0.308713837137853,0,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0.444756087689741,0.380451252225118,0,0.494096864172033,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.126473074248515,0.295220295959204,0.31399745568275,0,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0.35163505977661,0,0,4.41711507182759,5.0757036758563,7.32439552291516,4.06246956519338,3.34198011123591,2.83076530788832,5.66734982344852,3.50707029493574,7.90575555893047,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0.469343416127421,0.42366414172764,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0.509935289981566,0.979660166265606,0.276399947608848,0,0.158167996790568,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.943734099831398,0.483168241652012,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0,0,0,0,0,1.10992976687032,1.25599399253266,0.671538465456314,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0,0,0.44449345560323,0,0,0.252697211763798,0,0,0.280924522409647,0,0.17230640686684,0,0,0,0.412085900803307,0.294397840268795,0,0,0,0.145346416632329,0.282328141245992,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.467863216890817,0,0.191288332068843,0,0 | |||
|short_description=p4@Gtf2h1 | |||
}} |
Revision as of 13:51, 14 September 2013
Short description: | p4@Gtf2h1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gtf2h1_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | 37bp_to_ENSMUST00000165031_5end |
EntrezGene: | Gtf2h1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.80e-39 | 9 |
stem cell | 1.36e-11 | 97 |
neuron | 8.56e-10 | 33 |
neuronal stem cell | 8.56e-10 | 33 |
neuroblast | 8.56e-10 | 33 |
electrically signaling cell | 8.56e-10 | 33 |
somatic stem cell | 1.27e-09 | 91 |
multi fate stem cell | 1.27e-09 | 91 |
electrically responsive cell | 4.49e-08 | 39 |
electrically active cell | 4.49e-08 | 39 |
neural cell | 3.41e-07 | 43 |
ectodermal cell | 5.34e-07 | 44 |
neurectodermal cell | 5.34e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.80e-39 | 9 |
peripheral nervous system | 4.54e-32 | 11 |
sympathetic nervous system | 2.20e-14 | 3 |
neural crest-derived structure | 2.20e-14 | 3 |
neural crest | 2.20e-14 | 3 |
enteric nervous system | 2.20e-14 | 3 |
vagal neural crest | 2.20e-14 | 3 |
neural fold | 2.20e-14 | 3 |
parasympathetic nervous system | 7.30e-14 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.