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FFCP PHASE1:Mm9::chr19:57389292..57389305,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=226251|HGNC=|MCL_coexpression_id=39|UniProt=Q8K4G5|association_with_transcript=95bp_to_ENSMUST00000111524_5end|description=CAGE_peak_16_at_Ablim1_5end|id=chr19:57389292..57389305,-|ontology_enrichment_celltype=CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.00e-09,23;CL:0000337,2.00e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.04e-14!34;UBERON:0002791!4.34e-13!29;UBERON:0003528!4.34e-13!29;UBERON:0001893!4.34e-13!29;UBERON:0000955!1.88e-12!50;UBERON:0006238!1.88e-12!50;UBERON:0001049!4.01e-12!52;UBERON:0005068!4.01e-12!52;UBERON:0006241!4.01e-12!52;UBERON:0007135!4.01e-12!52;UBERON:0002616!5.33e-12!49;UBERON:0004111!5.67e-10!122;UBERON:0000033!5.88e-10!63;UBERON:0000956!9.83e-10!21;UBERON:0001869!9.83e-10!21;UBERON:0000203!9.83e-10!21;UBERON:0000025!1.01e-09!114;UBERON:0003080!1.64e-09!40;UBERON:0002780!5.36e-09!39;UBERON:0001890!5.36e-09!39;UBERON:0006240!5.36e-09!39;UBERON:0001017!2.91e-08!73;UBERON:0005743!2.91e-08!73;UBERON:0002619!5.98e-08!17;UBERON:0000073!1.05e-07!75;UBERON:0001016!1.05e-07!75;UBERON:0003056!1.76e-07!49;UBERON:0002021!2.28e-07!10;UBERON:0000411!2.28e-07!10;UBERON:0001950!2.28e-07!10;UBERON:0002346!6.49e-07!71;UBERON:0003075!6.49e-07!71;UBERON:0007284!6.49e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.24e-20,54;UBERON:0000955,9.96e-19,47;UBERON:0006238,9.96e-19,47;UBERON:0001049,1.15e-18,52;UBERON:0005068,1.15e-18,52;UBERON:0006241,1.15e-18,52;UBERON:0007135,1.15e-18,52;UBERON:0003528,2.44e-18,29;UBERON:0002791,2.44e-18,29;UBERON:0001893,2.44e-18,29;UBERON:0002616,6.52e-18,46;UBERON:0001017,1.04e-17,73;UBERON:0002020,1.62e-17,34;UBERON:0001016,6.49e-17,75;UBERON:0003080,4.61e-15,40;UBERON:0002780,3.95e-14,39;UBERON:0001890,3.95e-14,39;UBERON:0006240,3.95e-14,39;UBERON:0010314,5.26e-14,92;UBERON:0002346,2.95e-13,64;UBERON:0003075,2.95e-13,64;UBERON:0007284,2.95e-13,64;UBERON:0000956,4.02e-13,21;UBERON:0001869,4.02e-13,21;UBERON:0000203,4.02e-13,21;UBERON:0002021,1.81e-12,10;UBERON:0000411,1.81e-12,10;UBERON:0001950,1.81e-12,10;UBERON:0004121,7.55e-12,95;UBERON:0000924,7.55e-12,95;UBERON:0006601,7.55e-12,95;UBERON:0000025,7.75e-12,114;UBERON:0002619,4.32e-11,17;UBERON:0004111,4.49e-11,122;UBERON:0003056,7.44e-11,49;UBERON:0010371,1.98e-10,73|phase1_expression=0,1.04692622291808,0.909998478779072,1.81478526784098,3.00537437967808,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.850432901510698,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0.86152399231815,0.861884930743556,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,1.97010263386108,0.810035629990144,1.47227472945967,0.571301968807607,1.32521124570968,0.489963196859816,0.575072826109418,1.83843757322004,4.40463523997555,2.42605942361857,1.53606533256243,1.71452174049252,1.73826522844578,0.52091337055676,1.95428099300967,1.12552522006336,1.83357897332172,1.76777151284201,0.996601765593721,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.68510327831436,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,0.741584903203122,2.89198713839823,0,0.323533699894818,0,0.484875253135222,0,6.73395833126558,8.16842156572475,0.255457055208591,0,0,0,2.24685959107234,1.37250180845588,2.38743269014442,4.34560800480691,3.58001640262463,1.45451631191692,1.29793010454206,0.407357455401265,0.373220911830279,1.0108910337347,0.420883711772948,0,0,0.540186389416048,0,0.204109497453984,0.12811372028485,0.281105173679186,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0.983821158737019,1.07986979021165,1.39520366850245,0.536546802799238,1.75148013550754,3.12663714835613,2.13417703302824,4.70199095365963,4.82459958503597,3.73235195994786,2.68412837520744,2.3131894342054,2.57261530948211,1.32167513193519,1.58670339998127,0.213288250535234,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0.380451252225118,0.474529061544512,0.823494773620054,1.75934646160189,0.795825888164603,1.55971269695296,0.898819408654221,0.648414149624083,1.39398891278057,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.701358198903186,0.505892296994058,1.03327103585722,0.627994911365499,1.60416313098341,0.889357881261447,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,1.43848068725405,0.486405680325106,0,0,0.744281895337007,0.624075346229121,0,0.538192240565737,0.482443521363367,0.554259570499814,0,0.162964976442026,0,0.704070744865506,0.837531287209079,1.42826184531608,0.780534591431195,0.157635144106191,0.221464689648775,0.1594547686574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|EntrezGene=226251
|HGNC=
|MCL_coexpression_id=39
|UniProt=Q8K4G5
|association_with_transcript=95bp_to_ENSMUST00000111524_5end
|description=CAGE_peak_16_at_Ablim1_5end
|id=chr19:57389292..57389305,-
|ontology_enrichment_celltype=CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.00e-09,23;CL:0000337,2.00e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!4.04e-14!34;UBERON:0002791!4.34e-13!29;UBERON:0003528!4.34e-13!29;UBERON:0001893!4.34e-13!29;UBERON:0000955!1.88e-12!50;UBERON:0006238!1.88e-12!50;UBERON:0001049!4.01e-12!52;UBERON:0005068!4.01e-12!52;UBERON:0006241!4.01e-12!52;UBERON:0007135!4.01e-12!52;UBERON:0002616!5.33e-12!49;UBERON:0004111!5.67e-10!122;UBERON:0000033!5.88e-10!63;UBERON:0000956!9.83e-10!21;UBERON:0001869!9.83e-10!21;UBERON:0000203!9.83e-10!21;UBERON:0000025!1.01e-09!114;UBERON:0003080!1.64e-09!40;UBERON:0002780!5.36e-09!39;UBERON:0001890!5.36e-09!39;UBERON:0006240!5.36e-09!39;UBERON:0001017!2.91e-08!73;UBERON:0005743!2.91e-08!73;UBERON:0002619!5.98e-08!17;UBERON:0000073!1.05e-07!75;UBERON:0001016!1.05e-07!75;UBERON:0003056!1.76e-07!49;UBERON:0002021!2.28e-07!10;UBERON:0000411!2.28e-07!10;UBERON:0001950!2.28e-07!10;UBERON:0002346!6.49e-07!71;UBERON:0003075!6.49e-07!71;UBERON:0007284!6.49e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.24e-20,54;UBERON:0000955,9.96e-19,47;UBERON:0006238,9.96e-19,47;UBERON:0001049,1.15e-18,52;UBERON:0005068,1.15e-18,52;UBERON:0006241,1.15e-18,52;UBERON:0007135,1.15e-18,52;UBERON:0003528,2.44e-18,29;UBERON:0002791,2.44e-18,29;UBERON:0001893,2.44e-18,29;UBERON:0002616,6.52e-18,46;UBERON:0001017,1.04e-17,73;UBERON:0002020,1.62e-17,34;UBERON:0001016,6.49e-17,75;UBERON:0003080,4.61e-15,40;UBERON:0002780,3.95e-14,39;UBERON:0001890,3.95e-14,39;UBERON:0006240,3.95e-14,39;UBERON:0010314,5.26e-14,92;UBERON:0002346,2.95e-13,64;UBERON:0003075,2.95e-13,64;UBERON:0007284,2.95e-13,64;UBERON:0000956,4.02e-13,21;UBERON:0001869,4.02e-13,21;UBERON:0000203,4.02e-13,21;UBERON:0002021,1.81e-12,10;UBERON:0000411,1.81e-12,10;UBERON:0001950,1.81e-12,10;UBERON:0004121,7.55e-12,95;UBERON:0000924,7.55e-12,95;UBERON:0006601,7.55e-12,95;UBERON:0000025,7.75e-12,114;UBERON:0002619,4.32e-11,17;UBERON:0004111,4.49e-11,122;UBERON:0003056,7.44e-11,49;UBERON:0010371,1.98e-10,73
|phase1_expression=0,1.04692622291808,0.909998478779072,1.81478526784098,3.00537437967808,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0,0.850432901510698,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0.86152399231815,0.861884930743556,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,1.97010263386108,0.810035629990144,1.47227472945967,0.571301968807607,1.32521124570968,0.489963196859816,0.575072826109418,1.83843757322004,4.40463523997555,2.42605942361857,1.53606533256243,1.71452174049252,1.73826522844578,0.52091337055676,1.95428099300967,1.12552522006336,1.83357897332172,1.76777151284201,0.996601765593721,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0.448026887097336,0.421333260395256,0,0,0,0,0,0,0,0,0.253359865475099,0,0.68510327831436,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,0.741584903203122,2.89198713839823,0,0.323533699894818,0,0.484875253135222,0,6.73395833126558,8.16842156572475,0.255457055208591,0,0,0,2.24685959107234,1.37250180845588,2.38743269014442,4.34560800480691,3.58001640262463,1.45451631191692,1.29793010454206,0.407357455401265,0.373220911830279,1.0108910337347,0.420883711772948,0,0,0.540186389416048,0,0.204109497453984,0.12811372028485,0.281105173679186,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0.983821158737019,1.07986979021165,1.39520366850245,0.536546802799238,1.75148013550754,3.12663714835613,2.13417703302824,4.70199095365963,4.82459958503597,3.73235195994786,2.68412837520744,2.3131894342054,2.57261530948211,1.32167513193519,1.58670339998127,0.213288250535234,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0.380451252225118,0.474529061544512,0.823494773620054,1.75934646160189,0.795825888164603,1.55971269695296,0.898819408654221,0.648414149624083,1.39398891278057,0.189667900953082,0.228497025219458,0,0,0.193952487167626,0.701358198903186,0.505892296994058,1.03327103585722,0.627994911365499,1.60416313098341,0.889357881261447,0,0,0,0.202860121388503,0.241177159752417,0.25462585178142,1.43848068725405,0.486405680325106,0,0,0.744281895337007,0.624075346229121,0,0.538192240565737,0.482443521363367,0.554259570499814,0,0.162964976442026,0,0.704070744865506,0.837531287209079,1.42826184531608,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0.655453258862952,0.345369963731791,0.433947175744535,0,0,0,0.551873492609465,1.9266070798535,1.87538698547525,0,1.76729649043061,0,0,0,0,0.222798674082394,0,0,0,0,1.60660658210904,0,0,0.488660878060728,0.329940245945071,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,1.55056975900933,0,0,0,0,0,0,0,0.258717367565509,0.214337035031592,0,0,0.164549020602121,0,0,0,0.661585194164886,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0,0.582961673259701,2.03967832211561,0,0.206386867963223,0,0,0,0.457556346413045,0,0,0.138199973804424,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.404593039154462,0.578574190077352,0.785267825952089,0.777689839750757,3.10669656543463,0,0,0.165458490457098,0,0,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0,0,0.302899349844443,0,0,0,0,0,0.906921534460845,0,0,0,0.19318959403219,0.563047426353546,0.36630324853453,0.428736758158132,0.501572104035363,1.6942555278512,3.22227665555024,2.29158205375759,2.23409137046794,2.05524755931193,1.5107877947794,3.37511250115903,2.2516060161211,3.62513927187364,3.62432218226274,0,0,0.341467211508268,0,0,0.919217542250071,0.44449345560323,0.618105171716683,0.962757628775446,2.02157769411038,0.50695859978048,0.188626341386076,1.12369808963859,0.640251524048693,0.746661096422973,1.42888107384922,0.811190281613988,0.964546102318525,0.824171801606613,0.588795680537589,1.02860775715625,1.06485483695602,0.238436189947321,0.290692833264657,0.941093804153306,1.01537529470012,0.914639864363863,1.57841826862706,1.08643291076689,0,0.830445126869219,0.985044823755635,1.63692417267876,0.77468420592983,0.964533054905707,0.749431733813838,0,0.644613162144895,1.3390183244819,0.661774257358546,1.15933917810211
|short_description=p16@Ablim1
}}

Revision as of 18:11, 13 September 2013

Short description:p16@Ablim1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_16_at_Ablim1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 95bp_to_ENSMUST00000111524_5end
EntrezGene:Ablim1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p16@Ablim1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I23.13
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G14.70
heart, neonate N20.CNhs11127.821-26I64.82
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.00e-0923
neuroblast (sensu Vertebrata)2.00e-0923

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.24e-2054
brain9.96e-1947
future brain9.96e-1947
neural tube1.15e-1852
neural rod1.15e-1852
future spinal cord1.15e-1852
neural keel1.15e-1852
brain grey matter2.44e-1829
regional part of telencephalon2.44e-1829
telencephalon2.44e-1829
regional part of brain6.52e-1846
central nervous system1.04e-1773
gray matter1.62e-1734
nervous system6.49e-1775
anterior neural tube4.61e-1540
regional part of forebrain3.95e-1439
forebrain3.95e-1439
future forebrain3.95e-1439
structure with developmental contribution from neural crest5.26e-1492
neurectoderm2.95e-1364
neural plate2.95e-1364
presumptive neural plate2.95e-1364
cerebral cortex4.02e-1321
cerebral hemisphere4.02e-1321
pallium4.02e-1321
occipital lobe1.81e-1210
visual cortex1.81e-1210
neocortex1.81e-1210
ectoderm-derived structure7.55e-1295
ectoderm7.55e-1295
presumptive ectoderm7.55e-1295
tube7.75e-12114
regional part of cerebral cortex4.32e-1117
anatomical conduit4.49e-11122
pre-chordal neural plate7.44e-1149
ecto-epithelium1.98e-1073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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