FFCP PHASE1:Mm9::chr15:99650503..99650585,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=65970|HGNC=|MCL_coexpression_id=1508|UniProt=Q8CD09,Q9ERG0,Q8C3R7|association_with_transcript=0bp_to_ENSMUST00000109024,NM_023063,uc007xqh.2_5end|description=CAGE_peak_1_at_Lima1_5end|id=chr15:99650503..99650585,-|ontology_enrichment_celltype=CL:0000107!4.38e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,4.31e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!4.38e-07!9;UBERON:0000010!4.51e-07!11;UBERON:0003102!5.56e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.08e-07,22;UBERON:0002410,4.31e-07,9;UBERON:0000010,4.45e-07,11|phase1_expression=43.560486412504,0.348975407639361,1.36499771816861,0,0,0.33575854382378,0.233612640595526,0,0.140788722151667,0,0,0.0797721589953364,0,0.0874204024189974,6.66219523631325,3.44207954562704,0.699561878128147,1.57731082679119,1.7824876368746,0.84877930359606,11.6509307506966,0.893618560807968,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,4.60384793810598,4.6880120671428,4.18818995179039,26.4704169613956,22.5405010036287,15.5363312969969,153.468221112229,167.677444237077,202.819161138658,36.7723931843578,31.6136476751647,23.9457939180574,30.9143539528111,63.5538354179146,8.62515386189829,0.167782606057736,0.725362142011344,0.336093799142464,81.2939817873592,72.2064268645667,70.6470766420096,0.606949382578793,2.11596391708813,0,59.2977931120981,55.1362773588906,19.3478439215501,35.5991890524111,23.4458437932213,21.8708080678435,13.831858991576,5.08079100311541,7.69533848490637,6.73039876324422,3.42781181284564,9.49734726091938,9.67677313798137,12.555756703389,11.0306254393203,2.20231761998777,2.55374676170375,1.68967186581868,1.58263545276233,1.9212405156506,3.64639359389732,2.23346399201105,4.50210088025344,3.20876320331301,11.490514833473,8.39992916714707,3.91438836233131,26.731346246614,58.1145297221181,72.4661221754194,12.0459342777394,1.3599426674155,1.07940638327563,0.649776417447669,1.34408066129201,10.8142203501449,169.748601287746,126.255998236994,101.761797458978,23.5208511027056,118.060359221172,28.028576367731,21.3320010945999,72.3080076977455,74.7411603151541,67.2347511869662,7.4219521817389,27.4474156666002,27.4617957269926,30.1864468573076,30.4465478312141,23.0615497256059,22.759118723446,33.6303702408116,16.8393232381765,33.3713206441405,29.7874675255018,18.5768215909474,58.0742991311199,27.6051898075492,27.6378894287077,11.1835056730873,2.04946557908083,4.60782754989601,8.9409969323007,0.599075622529601,1.19980546198682,0.889491589511453,3.14560342750128,1.37250180845588,4.52355667606312,2.78118912307642,4.09144731728529,2.90903262383384,8.92326946872667,58.7613129416325,30.4797077994728,20.975988949995,11.995185785529,34.6120378280792,21.380895712313,32.4111833649629,30.8944876563216,25.6497601800506,24.9821754555457,19.021450085625,21.2136764005993,63.1614219293228,69.5910375017575,87.0958064611547,71.4578087713894,87.8629307552889,79.0532418005318,86.0169330185204,37.6174764286952,1.40442637462647,1.54408744268829,3.9782889915383,29.2047339275058,31.1919659774858,25.2086886045421,26.0419209143731,22.8246508826988,21.2888615784582,22.78832658554,28.9735273511589,17.5148013550754,22.8738191379738,29.221808606079,23.5099547682982,20.6141982269719,28.9806152184187,16.9100087638068,2.3131894342054,4.93942139420565,0.991256348951394,8.19796756656987,51.8290448800619,52.2532511685987,33.6344074050664,27.2272758241512,24.9063409106255,23.0173007596197,9.96511029243474,27.9988223030818,25.8875265064278,25.2674719492262,23.9805827156518,8.08937467788799,14.0489732418551,8.96135729644652,24.8464950248537,35.9882814720646,36.0664754153857,37.6754956513831,39.372354895028,36.540762162856,46.9215105461989,38.231028326717,30.6147519290681,15.0544539984597,5.33614728756868,9.67701613153345,5.30709286805648,6.2961391467759,6.08580364165509,5.30589751455317,7.89340140522401,7.48009957372108,6.97181475132652,9.60964946158285,17.2521847832825,13.3970741160661,14.6657706363843,12.6289438973556,6.81710171383266,10.1313139486307,35.1031061316549,34.4874369422282,33.2448551941733,36.8346836132158,37.5504397261603,47.0692583411502,47.6087281772027,35.904591205835,53.7535841402111,63.3389012395496,44.3284256867814,45.5540014909752,29.8745018627999,30.2316532435359,6.03165135757089,17.4049818821987,21.6376280128376,40.8386384531004,5.9403718295483,10.5490517932983,87.2133909403913,28.5292147740941,83.2941699258918,92.5339823983033,98.0176459684235,143.620247569484,118.974491959998,87.4706480137492,99.1786219103491,96.4444331107329,107.913563379401,9.96096080907602,40.3109841991483,56.6248619661872,46.097009497062,60.379065007948,7.96470830039777,25.977528068583,17.2324427469908,16.7858520982749,24.2147552162234,35.6624771614956,45.2249513044387,40.3522439720031,36.3627325952416,24.9669038769295,14.7586052004998,15.470331487228,5.44703369206061,29.7100805151662,20.3093133538925,24.2200849585699,26.7783752799833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| ||
|EntrezGene=65970 | |||
|HGNC= | |||
|MCL_coexpression_id=1508 | |||
|UniProt=Q8CD09,Q9ERG0,Q8C3R7 | |||
|association_with_transcript=0bp_to_ENSMUST00000109024,NM_023063,uc007xqh.2_5end | |||
|description=CAGE_peak_1_at_Lima1_5end | |||
|id=chr15:99650503..99650585,- | |||
|ontology_enrichment_celltype=CL:0000107!4.38e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.31e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!4.38e-07!9;UBERON:0000010!4.51e-07!11;UBERON:0003102!5.56e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.08e-07,22;UBERON:0002410,4.31e-07,9;UBERON:0000010,4.45e-07,11 | |||
|phase1_expression=43.560486412504,0.348975407639361,1.36499771816861,0,0,0.33575854382378,0.233612640595526,0,0.140788722151667,0,0,0.0797721589953364,0,0.0874204024189974,6.66219523631325,3.44207954562704,0.699561878128147,1.57731082679119,1.7824876368746,0.84877930359606,11.6509307506966,0.893618560807968,0.261199789138935,0.159992422793407,0.22940928106717,0.57423196411502,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,4.60384793810598,4.6880120671428,4.18818995179039,26.4704169613956,22.5405010036287,15.5363312969969,153.468221112229,167.677444237077,202.819161138658,36.7723931843578,31.6136476751647,23.9457939180574,30.9143539528111,63.5538354179146,8.62515386189829,0.167782606057736,0.725362142011344,0.336093799142464,81.2939817873592,72.2064268645667,70.6470766420096,0.606949382578793,2.11596391708813,0,59.2977931120981,55.1362773588906,19.3478439215501,35.5991890524111,23.4458437932213,21.8708080678435,13.831858991576,5.08079100311541,7.69533848490637,6.73039876324422,3.42781181284564,9.49734726091938,9.67677313798137,12.555756703389,11.0306254393203,2.20231761998777,2.55374676170375,1.68967186581868,1.58263545276233,1.9212405156506,3.64639359389732,2.23346399201105,4.50210088025344,3.20876320331301,11.490514833473,8.39992916714707,3.91438836233131,26.731346246614,58.1145297221181,72.4661221754194,12.0459342777394,1.3599426674155,1.07940638327563,0.649776417447669,1.34408066129201,10.8142203501449,169.748601287746,126.255998236994,101.761797458978,23.5208511027056,118.060359221172,28.028576367731,21.3320010945999,72.3080076977455,74.7411603151541,67.2347511869662,7.4219521817389,27.4474156666002,27.4617957269926,30.1864468573076,30.4465478312141,23.0615497256059,22.759118723446,33.6303702408116,16.8393232381765,33.3713206441405,29.7874675255018,18.5768215909474,58.0742991311199,27.6051898075492,27.6378894287077,11.1835056730873,2.04946557908083,4.60782754989601,8.9409969323007,0.599075622529601,1.19980546198682,0.889491589511453,3.14560342750128,1.37250180845588,4.52355667606312,2.78118912307642,4.09144731728529,2.90903262383384,8.92326946872667,58.7613129416325,30.4797077994728,20.975988949995,11.995185785529,34.6120378280792,21.380895712313,32.4111833649629,30.8944876563216,25.6497601800506,24.9821754555457,19.021450085625,21.2136764005993,63.1614219293228,69.5910375017575,87.0958064611547,71.4578087713894,87.8629307552889,79.0532418005318,86.0169330185204,37.6174764286952,1.40442637462647,1.54408744268829,3.9782889915383,29.2047339275058,31.1919659774858,25.2086886045421,26.0419209143731,22.8246508826988,21.2888615784582,22.78832658554,28.9735273511589,17.5148013550754,22.8738191379738,29.221808606079,23.5099547682982,20.6141982269719,28.9806152184187,16.9100087638068,2.3131894342054,4.93942139420565,0.991256348951394,8.19796756656987,51.8290448800619,52.2532511685987,33.6344074050664,27.2272758241512,24.9063409106255,23.0173007596197,9.96511029243474,27.9988223030818,25.8875265064278,25.2674719492262,23.9805827156518,8.08937467788799,14.0489732418551,8.96135729644652,24.8464950248537,35.9882814720646,36.0664754153857,37.6754956513831,39.372354895028,36.540762162856,46.9215105461989,38.231028326717,30.6147519290681,15.0544539984597,5.33614728756868,9.67701613153345,5.30709286805648,6.2961391467759,6.08580364165509,5.30589751455317,7.89340140522401,7.48009957372108,6.97181475132652,9.60964946158285,17.2521847832825,13.3970741160661,14.6657706363843,12.6289438973556,6.81710171383266,10.1313139486307,35.1031061316549,34.4874369422282,33.2448551941733,36.8346836132158,37.5504397261603,47.0692583411502,47.6087281772027,35.904591205835,53.7535841402111,63.3389012395496,44.3284256867814,45.5540014909752,29.8745018627999,30.2316532435359,6.03165135757089,17.4049818821987,21.6376280128376,40.8386384531004,5.9403718295483,10.5490517932983,87.2133909403913,28.5292147740941,83.2941699258918,92.5339823983033,98.0176459684235,143.620247569484,118.974491959998,87.4706480137492,99.1786219103491,96.4444331107329,107.913563379401,9.96096080907602,40.3109841991483,56.6248619661872,46.097009497062,60.379065007948,7.96470830039777,25.977528068583,17.2324427469908,16.7858520982749,24.2147552162234,35.6624771614956,45.2249513044387,40.3522439720031,36.3627325952416,24.9669038769295,14.7586052004998,15.470331487228,5.44703369206061,29.7100805151662,20.3093133538925,24.2200849585699,26.7783752799833,24.9716344642899,22.7077648430927,21.9214763362511,89.8792641884011,64.820613684329,21.3912546113313,50.2903071471514,65.2316283851458,60.4938637029403,61.9542465376278,69.2674596924159,13.9910801582328,5.37733375830478,24.4345359540929,31.7835776663363,27.593984578087,20.5321618135113,22.1444648908061,26.5382680919566,0.679913719975421,0.279902904647316,0,11.4560474161814,31.3172633645324,35.7842262143254,41.3660455347499,57.7083696999934,50.2233896616208,62.0375993370175,46.8645093962655,30.1019333281634,12.3134224627203,13.0481255748254,2.81846469342095,30.2023423008837,27.9624848872495,32.473348453456,33.710713927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| |||
|short_description=p1@Lima1 | |||
}} | |||
Revision as of 11:54, 13 September 2013
| Short description: | p1@Lima1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Lima1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1508 |
| Association with transcript: | 0bp_to_ENSMUST00000109024, NM_023063, uc007xqh.2_5end |
| EntrezGene: | Lima1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 4.31e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| surface structure | 4.08e-07 | 22 |
| autonomic nervous system | 4.31e-07 | 9 |
| peripheral nervous system | 4.45e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
