FFCP PHASE1:Mm9::chr7:16531372..16531383,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68077|HGNC=|MCL_coexpression_id=505|UniProt=Q3USL3|association_with_transcript=-225bp_to_uc009fgq.1_5end|description=CAGE_peak_4_at_Gltscr2_5end|id=chr7:16531372..16531383,-|ontology_enrichment_celltype=CL:0000791!7.44e-11!9;CL:0000789!7.44e-11!9;CL:0002420!7.44e-11!9;CL:0002419!7.44e-11!9;CL:0000790!7.44e-11!9;CL:0000838!5.92e-10!12;CL:0000624!2.61e-09!8;CL:0000542!5.07e-09!13;CL:0000051!5.07e-09!13;CL:0000084!1.49e-08!11;CL:0000827!1.49e-08!11;CL:0000893!6.96e-07!6;CL:0002489!6.96e-07!6;CL:0000898!6.96e-07!6;CL:0000809!6.96e-07!6;CL:0000810!6.96e-07!6;CL:0000895!6.96e-07!6;CL:0000808!6.96e-07!6;CL:0000894!6.96e-07!6;CL:0000806!6.96e-07!6;CL:0000807!6.96e-07!6;CL:0000805!6.96e-07!6;CL:0002425!6.96e-07!6;CL:0002436!6.96e-07!6;CL:0002427!6.96e-07!6;CL:0002428!6.96e-07!6;CL:0002429!6.96e-07!6;CL:0002433!6.96e-07!6;CL:0002431!6.96e-07!6;CL:0002432!6.96e-07!6|ontology_enrichment_celltype_v019_2=CL:0000838,7.34e-16,12;CL:0000542,1.21e-14,13;CL:0000051,1.21e-14,13;CL:0000791,6.55e-14,9;CL:0000789,6.55e-14,9;CL:0002420,6.55e-14,9;CL:0002419,6.55e-14,9;CL:0000790,6.55e-14,9;CL:0000084,1.96e-11,11;CL:0000827,1.96e-11,11;CL:0000738,3.33e-11,17;CL:0002087,3.33e-11,17;CL:0000215,2.21e-10,3;CL:0000624,2.98e-09,8;CL:0000625,7.41e-09,1;CL:0000945,1.05e-08,1;CL:0000236,1.05e-08,1;CL:0000826,1.05e-08,1;CL:0000213,2.06e-08,1;CL:0002078,2.06e-08,1;CL:0000115,2.06e-08,1;CL:0002262,2.06e-08,1;CL:1000398,2.06e-08,1;CL:0002031,1.32e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.06e-08,1;UBERON:0001281,2.06e-08,1;UBERON:0000353,2.06e-08,1;UBERON:0003497,2.06e-08,1;UBERON:0003909,2.06e-08,1;UBERON:0003928,2.06e-08,1;UBERON:0003835,2.06e-08,1;UBERON:0003513,2.06e-08,1;UBERON:0001280,2.06e-08,1;UBERON:0004647,2.06e-08,1;UBERON:0002294,2.06e-08,1;UBERON:0001173,2.06e-08,1;UBERON:0004912,2.06e-08,1;UBERON:0005171,2.06e-08,1|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.33575854382378,0.233612640595526,0.129123323441576,13.51571732656,30.6624529481811,0.513653904676515,0.558405112967355,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,5.03347818173209,23.211588544363,8.73843877770406,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0.284743361598206,0,1.06016670666458,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,4.00793775475027,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0.680879211507576,0,0.258717367565509,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,5.09935289981566,4.61839792668071,2.3493995546752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Gltscr2}} | ||
|EntrezGene=68077 | |||
|HGNC= | |||
|MCL_coexpression_id=505 | |||
|UniProt=Q3USL3 | |||
|association_with_transcript=-225bp_to_uc009fgq.1_5end | |||
|description=CAGE_peak_4_at_Gltscr2_5end | |||
|id=chr7:16531372..16531383,- | |||
|ontology_enrichment_celltype=CL:0000791!7.44e-11!9;CL:0000789!7.44e-11!9;CL:0002420!7.44e-11!9;CL:0002419!7.44e-11!9;CL:0000790!7.44e-11!9;CL:0000838!5.92e-10!12;CL:0000624!2.61e-09!8;CL:0000542!5.07e-09!13;CL:0000051!5.07e-09!13;CL:0000084!1.49e-08!11;CL:0000827!1.49e-08!11;CL:0000893!6.96e-07!6;CL:0002489!6.96e-07!6;CL:0000898!6.96e-07!6;CL:0000809!6.96e-07!6;CL:0000810!6.96e-07!6;CL:0000895!6.96e-07!6;CL:0000808!6.96e-07!6;CL:0000894!6.96e-07!6;CL:0000806!6.96e-07!6;CL:0000807!6.96e-07!6;CL:0000805!6.96e-07!6;CL:0002425!6.96e-07!6;CL:0002436!6.96e-07!6;CL:0002427!6.96e-07!6;CL:0002428!6.96e-07!6;CL:0002429!6.96e-07!6;CL:0002433!6.96e-07!6;CL:0002431!6.96e-07!6;CL:0002432!6.96e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.34e-16,12;CL:0000542,1.21e-14,13;CL:0000051,1.21e-14,13;CL:0000791,6.55e-14,9;CL:0000789,6.55e-14,9;CL:0002420,6.55e-14,9;CL:0002419,6.55e-14,9;CL:0000790,6.55e-14,9;CL:0000084,1.96e-11,11;CL:0000827,1.96e-11,11;CL:0000738,3.33e-11,17;CL:0002087,3.33e-11,17;CL:0000215,2.21e-10,3;CL:0000624,2.98e-09,8;CL:0000625,7.41e-09,1;CL:0000945,1.05e-08,1;CL:0000236,1.05e-08,1;CL:0000826,1.05e-08,1;CL:0000213,2.06e-08,1;CL:0002078,2.06e-08,1;CL:0000115,2.06e-08,1;CL:0002262,2.06e-08,1;CL:1000398,2.06e-08,1;CL:0002031,1.32e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.06e-08,1;UBERON:0001281,2.06e-08,1;UBERON:0000353,2.06e-08,1;UBERON:0003497,2.06e-08,1;UBERON:0003909,2.06e-08,1;UBERON:0003928,2.06e-08,1;UBERON:0003835,2.06e-08,1;UBERON:0003513,2.06e-08,1;UBERON:0001280,2.06e-08,1;UBERON:0004647,2.06e-08,1;UBERON:0002294,2.06e-08,1;UBERON:0001173,2.06e-08,1;UBERON:0004912,2.06e-08,1;UBERON:0005171,2.06e-08,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.33575854382378,0.233612640595526,0.129123323441576,13.51571732656,30.6624529481811,0.513653904676515,0.558405112967355,0,0.0874204024189974,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,0,0,5.03347818173209,23.211588544363,8.73843877770406,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0.284743361598206,0,1.06016670666458,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,4.00793775475027,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0.680879211507576,0,0.258717367565509,0,0,0,0,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,5.09935289981566,4.61839792668071,2.3493995546752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Gltscr2 | |||
}} |
Revision as of 12:32, 14 September 2013
Short description: | p4@Gltscr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gltscr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:505 |
Association with transcript: | -225bp_to_uc009fgq.1_5end |
EntrezGene: | Gltscr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.34e-16 | 12 |
lymphocyte | 1.21e-14 | 13 |
common lymphoid progenitor | 1.21e-14 | 13 |
mature alpha-beta T cell | 6.55e-14 | 9 |
alpha-beta T cell | 6.55e-14 | 9 |
immature T cell | 6.55e-14 | 9 |
mature T cell | 6.55e-14 | 9 |
immature alpha-beta T cell | 6.55e-14 | 9 |
T cell | 1.96e-11 | 11 |
pro-T cell | 1.96e-11 | 11 |
leukocyte | 3.33e-11 | 17 |
nongranular leukocyte | 3.33e-11 | 17 |
barrier cell | 2.21e-10 | 3 |
CD4-positive, alpha-beta T cell | 2.98e-09 | 8 |
CD8-positive, alpha-beta T cell | 7.41e-09 | 1 |
lymphocyte of B lineage | 1.05e-08 | 1 |
B cell | 1.05e-08 | 1 |
pro-B cell | 1.05e-08 | 1 |
lining cell | 2.06e-08 | 1 |
meso-epithelial cell | 2.06e-08 | 1 |
endothelial cell | 2.06e-08 | 1 |
endothelial cell of sinusoid | 2.06e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.06e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 1.32e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.06e-08 | 1 |
hepatic sinusoid | 2.06e-08 | 1 |
parenchyma | 2.06e-08 | 1 |
abdomen blood vessel | 2.06e-08 | 1 |
sinusoid | 2.06e-08 | 1 |
digestive system duct | 2.06e-08 | 1 |
abdominal segment blood vessel | 2.06e-08 | 1 |
trunk blood vessel | 2.06e-08 | 1 |
liver parenchyma | 2.06e-08 | 1 |
liver lobule | 2.06e-08 | 1 |
biliary system | 2.06e-08 | 1 |
biliary tree | 2.06e-08 | 1 |
biliary bud | 2.06e-08 | 1 |
hepatic duct | 2.06e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.