FFCP PHASE1:Mm9::chr14:75531391..75531414,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18826|HGNC=|MCL_coexpression_id=8|UniProt=Q61233|association_with_transcript=30bp_to_ENSMUST00000124499_5end|description=CAGE_peak_8_at_Lcp1_5end|id=chr14:75531391..75531414,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.60e-13,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.86e-10!66;UBERON:0002365!8.10e-10!25;UBERON:0002330!8.10e-10!25;UBERON:0005177!2.64e-08!85;UBERON:0005172!3.80e-08!49;UBERON:0005173!3.80e-08!49;UBERON:0002417!3.80e-08!49;UBERON:0000916!3.80e-08!49;UBERON:0002107!9.43e-08!22;UBERON:0007499!9.43e-08!22;UBERON:0006925!9.43e-08!22;UBERON:0009497!9.43e-08!22;UBERON:0000015!9.43e-08!22;UBERON:0002423!9.43e-08!22;UBERON:0006235!9.43e-08!22;UBERON:0008835!9.43e-08!22;UBERON:0003894!9.43e-08!22;UBERON:0004161!9.43e-08!22;UBERON:0008836!9.43e-08!22;UBERON:0000466!1.80e-07!79;UBERON:0000077!3.17e-07!97;UBERON:0009854!3.76e-07!23;UBERON:0009856!3.76e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002365,4.72e-18,25;UBERON:0002330,4.72e-18,25;UBERON:0002107,3.85e-17,22;UBERON:0007499,3.85e-17,22;UBERON:0006925,3.85e-17,22;UBERON:0009497,3.85e-17,22;UBERON:0000015,3.85e-17,22;UBERON:0002423,3.85e-17,22;UBERON:0006235,3.85e-17,22;UBERON:0008835,3.85e-17,22;UBERON:0003894,3.85e-17,22;UBERON:0004161,3.85e-17,22;UBERON:0008836,3.85e-17,22;UBERON:0009854,2.53e-16,23;UBERON:0009856,2.53e-16,23;UBERON:0005172,1.19e-11,49;UBERON:0005173,1.19e-11,49;UBERON:0002417,1.19e-11,49;UBERON:0000916,1.19e-11,49;UBERON:0005256,5.61e-11,45;UBERON:0003914,2.03e-10,47;UBERON:0003104,6.83e-09,61;UBERON:0009142,6.83e-09,61;UBERON:0009569,4.87e-08,66|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0.315462165358238,0.685572168028694,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0,0,6.0229671388697,3.39985666853875,12.9528765993076,12.9955283489534,8.96053774194671,3.23022166303029,0,0,0,0,0,0,0,0,0,0,4.79572294820052,2.58937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,1.7416975885413,9.85618757891331,2.31486041475121,0,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0.292399974850665,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0,0,0,0,0.442830443938806,1.09899109488962,0.370191491765402,13.6368208460088,0,0,0,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0.549122826376163,4.31304619582064,0.744281895337007,0.624075346229121,6.81962970457202,7.71408878144222,9.16642690590398,0.554259570499814,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.714130922658041,0.195133647857799,0.788175720530955,0.44292937929755,0.318909537314974,0.491589944147214,0.863424909329478,0,0,1.08781136763742,0.983528546038072,0.827810238914197,1.76605648986571,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0,0.882113592219848,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,2.78137953015765,0,0.619160603889667,0,0.376736914009382,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0.539457385539283,0.578574190077352,2.35580347785627,0,4.97071450469541,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0.308132871494482,0.389762468933385,0,0,0.360586348559907,0,0,0,0.100826185136841,0.194915761479505,0.384847366561318,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.34461281373368,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.661774257358546,0|short_description=p8@Lcp1}} | ||
|EntrezGene=18826 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=Q61233 | |||
|association_with_transcript=30bp_to_ENSMUST00000124499_5end | |||
|description=CAGE_peak_8_at_Lcp1_5end | |||
|id=chr14:75531391..75531414,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.60e-13,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.86e-10!66;UBERON:0002365!8.10e-10!25;UBERON:0002330!8.10e-10!25;UBERON:0005177!2.64e-08!85;UBERON:0005172!3.80e-08!49;UBERON:0005173!3.80e-08!49;UBERON:0002417!3.80e-08!49;UBERON:0000916!3.80e-08!49;UBERON:0002107!9.43e-08!22;UBERON:0007499!9.43e-08!22;UBERON:0006925!9.43e-08!22;UBERON:0009497!9.43e-08!22;UBERON:0000015!9.43e-08!22;UBERON:0002423!9.43e-08!22;UBERON:0006235!9.43e-08!22;UBERON:0008835!9.43e-08!22;UBERON:0003894!9.43e-08!22;UBERON:0004161!9.43e-08!22;UBERON:0008836!9.43e-08!22;UBERON:0000466!1.80e-07!79;UBERON:0000077!3.17e-07!97;UBERON:0009854!3.76e-07!23;UBERON:0009856!3.76e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,4.72e-18,25;UBERON:0002330,4.72e-18,25;UBERON:0002107,3.85e-17,22;UBERON:0007499,3.85e-17,22;UBERON:0006925,3.85e-17,22;UBERON:0009497,3.85e-17,22;UBERON:0000015,3.85e-17,22;UBERON:0002423,3.85e-17,22;UBERON:0006235,3.85e-17,22;UBERON:0008835,3.85e-17,22;UBERON:0003894,3.85e-17,22;UBERON:0004161,3.85e-17,22;UBERON:0008836,3.85e-17,22;UBERON:0009854,2.53e-16,23;UBERON:0009856,2.53e-16,23;UBERON:0005172,1.19e-11,49;UBERON:0005173,1.19e-11,49;UBERON:0002417,1.19e-11,49;UBERON:0000916,1.19e-11,49;UBERON:0005256,5.61e-11,45;UBERON:0003914,2.03e-10,47;UBERON:0003104,6.83e-09,61;UBERON:0009142,6.83e-09,61;UBERON:0009569,4.87e-08,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0.202475267389826,0.699561878128147,0.315462165358238,0.685572168028694,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0.075726193333184,0,0,6.0229671388697,3.39985666853875,12.9528765993076,12.9955283489534,8.96053774194671,3.23022166303029,0,0,0,0,0,0,0,0,0,0,4.79572294820052,2.58937883647172,0,0.173485326766136,0,0,0.150722640552623,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,1.7416975885413,9.85618757891331,2.31486041475121,0,0.229902104433473,0,0.150704817835715,0,0.12811372028485,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0.308534225774757,0,0.268273401399619,0,0,0,0,0.292399974850665,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.228497025219458,0,0,0,0,0,0.442830443938806,1.09899109488962,0.370191491765402,13.6368208460088,0,0,0,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0.549122826376163,4.31304619582064,0.744281895337007,0.624075346229121,6.81962970457202,7.71408878144222,9.16642690590398,0.554259570499814,0,0,0.339490171550376,0.234690248288502,0.167506257441816,0.714130922658041,0.195133647857799,0.788175720530955,0.44292937929755,0.318909537314974,0.491589944147214,0.863424909329478,0,0,1.08781136763742,0.983528546038072,0.827810238914197,1.76605648986571,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0,0.882113592219848,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,2.78137953015765,0,0.619160603889667,0,0.376736914009382,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0.539457385539283,0.578574190077352,2.35580347785627,0,4.97071450469541,0,0.448549638131936,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0.316011120628178,0,0.308132871494482,0.389762468933385,0,0,0.360586348559907,0,0,0,0.100826185136841,0.194915761479505,0.384847366561318,0,0.453460767230423,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.34461281373368,0,0,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.338458431566706,0.365855945745545,0,0,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0,0.233931608445408,0.214871054048298,0,0.661774257358546,0 | |||
|short_description=p8@Lcp1 | |||
}} |
Revision as of 03:05, 13 September 2013
Short description: | p8@Lcp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Lcp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 30bp_to_ENSMUST00000124499_5end |
EntrezGene: | Lcp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.60e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 4.72e-18 | 25 |
exocrine system | 4.72e-18 | 25 |
liver | 3.85e-17 | 22 |
epithelial sac | 3.85e-17 | 22 |
digestive gland | 3.85e-17 | 22 |
epithelium of foregut-midgut junction | 3.85e-17 | 22 |
anatomical boundary | 3.85e-17 | 22 |
hepatobiliary system | 3.85e-17 | 22 |
foregut-midgut junction | 3.85e-17 | 22 |
hepatic diverticulum | 3.85e-17 | 22 |
liver primordium | 3.85e-17 | 22 |
septum transversum | 3.85e-17 | 22 |
liver bud | 3.85e-17 | 22 |
digestive tract diverticulum | 2.53e-16 | 23 |
sac | 2.53e-16 | 23 |
abdomen element | 1.19e-11 | 49 |
abdominal segment element | 1.19e-11 | 49 |
abdominal segment of trunk | 1.19e-11 | 49 |
abdomen | 1.19e-11 | 49 |
trunk mesenchyme | 5.61e-11 | 45 |
epithelial tube | 2.03e-10 | 47 |
mesenchyme | 6.83e-09 | 61 |
entire embryonic mesenchyme | 6.83e-09 | 61 |
subdivision of trunk | 4.87e-08 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.