FFCP PHASE1:Mm9::chr3:95912444..95912454,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2388|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:95912444..95912454,+|id=chr3:95912444..95912454,+|ontology_enrichment_celltype=CL:0002610!2.11e-10!3;CL:0000630!3.46e-10!3;CL:0000325!6.89e-08!2;CL:0000217!6.89e-08!2;CL:0000328!6.89e-08!2;CL:0002573!6.89e-08!2;CL:0002376!6.89e-08!2;CL:0000218!6.89e-08!2;CL:0000692!6.89e-08!2;CL:0002377!6.89e-08!2;CL:0002375!6.89e-08!2|ontology_enrichment_celltype_v019_2=CL:0000217,1.84e-23,2;CL:0000328,1.84e-23,2;CL:0002573,1.84e-23,2;CL:0002376,1.84e-23,2;CL:0000218,1.84e-23,2;CL:0000692,1.84e-23,2;CL:0002377,1.84e-23,2;CL:0002375,1.84e-23,2;CL:0000215,5.28e-16,3;CL:0002610,3.97e-15,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!3.52e-13!6;UBERON:0002616!4.00e-13!49;UBERON:0000073!8.27e-13!75;UBERON:0001016!8.27e-13!75;UBERON:0000955!8.58e-13!50;UBERON:0006238!8.58e-13!50;UBERON:0000033!3.20e-12!63;UBERON:0004121!1.38e-11!102;UBERON:0000924!1.38e-11!102;UBERON:0006601!1.38e-11!102;UBERON:0004684!2.11e-10!3;UBERON:0002275!2.11e-10!3;UBERON:0001049!2.14e-10!52;UBERON:0005068!2.14e-10!52;UBERON:0006241!2.14e-10!52;UBERON:0007135!2.14e-10!52;UBERON:0001017!3.46e-10!73;UBERON:0005743!3.46e-10!73;UBERON:0007811!5.59e-09!86;UBERON:0003076!9.97e-09!12;UBERON:0003057!9.97e-09!12;UBERON:0004733!2.15e-08!6;UBERON:0004732!2.15e-08!6;UBERON:0002028!2.15e-08!6;UBERON:0007277!2.15e-08!6;UBERON:0000153!7.06e-08!94;UBERON:0002950!1.14e-07!4;UBERON:0001891!1.14e-07!4;UBERON:0009616!1.14e-07!4;UBERON:0001896!2.06e-07!2;UBERON:0005290!2.06e-07!2;UBERON:0010096!2.06e-07!2;UBERON:0002346!8.72e-07!71;UBERON:0003075!8.72e-07!71;UBERON:0007284!8.72e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.97e-15,3;UBERON:0002275,3.97e-15,3;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,1.0214987046815,0.921639199537461,0,0,0,0,1.12552522006336,0.45839474333043,0,0,0,4.24066682665831,2.87171928405785,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.898743836428936,0.915001205637253,0,0,0,1.24672826735736,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr3:95912444..95912454,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2388 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:95912444..95912454,+ | |||
|id=chr3:95912444..95912454,+ | |||
|ontology_enrichment_celltype=CL:0002610!2.11e-10!3;CL:0000630!3.46e-10!3;CL:0000325!6.89e-08!2;CL:0000217!6.89e-08!2;CL:0000328!6.89e-08!2;CL:0002573!6.89e-08!2;CL:0002376!6.89e-08!2;CL:0000218!6.89e-08!2;CL:0000692!6.89e-08!2;CL:0002377!6.89e-08!2;CL:0002375!6.89e-08!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,1.84e-23,2;CL:0000328,1.84e-23,2;CL:0002573,1.84e-23,2;CL:0002376,1.84e-23,2;CL:0000218,1.84e-23,2;CL:0000692,1.84e-23,2;CL:0002377,1.84e-23,2;CL:0002375,1.84e-23,2;CL:0000215,5.28e-16,3;CL:0002610,3.97e-15,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!3.52e-13!6;UBERON:0002616!4.00e-13!49;UBERON:0000073!8.27e-13!75;UBERON:0001016!8.27e-13!75;UBERON:0000955!8.58e-13!50;UBERON:0006238!8.58e-13!50;UBERON:0000033!3.20e-12!63;UBERON:0004121!1.38e-11!102;UBERON:0000924!1.38e-11!102;UBERON:0006601!1.38e-11!102;UBERON:0004684!2.11e-10!3;UBERON:0002275!2.11e-10!3;UBERON:0001049!2.14e-10!52;UBERON:0005068!2.14e-10!52;UBERON:0006241!2.14e-10!52;UBERON:0007135!2.14e-10!52;UBERON:0001017!3.46e-10!73;UBERON:0005743!3.46e-10!73;UBERON:0007811!5.59e-09!86;UBERON:0003076!9.97e-09!12;UBERON:0003057!9.97e-09!12;UBERON:0004733!2.15e-08!6;UBERON:0004732!2.15e-08!6;UBERON:0002028!2.15e-08!6;UBERON:0007277!2.15e-08!6;UBERON:0000153!7.06e-08!94;UBERON:0002950!1.14e-07!4;UBERON:0001891!1.14e-07!4;UBERON:0009616!1.14e-07!4;UBERON:0001896!2.06e-07!2;UBERON:0005290!2.06e-07!2;UBERON:0010096!2.06e-07!2;UBERON:0002346!8.72e-07!71;UBERON:0003075!8.72e-07!71;UBERON:0007284!8.72e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,3.97e-15,3;UBERON:0002275,3.97e-15,3;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,1.0214987046815,0.921639199537461,0,0,0,0,1.12552522006336,0.45839474333043,0,0,0,4.24066682665831,2.87171928405785,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0.898743836428936,0.915001205637253,0,0,0,1.24672826735736,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,0.703270119553219,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr3:95912444..95912454,+ | |||
}} |
Revision as of 03:07, 14 September 2013
Short description: | p@chr3:95912444..95912454, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95912444..95912454, + |
Coexpression cluster: | MCL_coexpression_mm9:2388 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 1.84e-23 | 2 |
myelin accumulating cell | 1.84e-23 | 2 |
Schwann cell | 1.84e-23 | 2 |
non-myelinating Schwann cell | 1.84e-23 | 2 |
myelinating Schwann cell;;Schwann cell | 1.84e-23 | 2 |
terminal Schwann cell | 1.84e-23 | 2 |
immature Schwann cell | 1.84e-23 | 2 |
Schwann cell precursor | 1.84e-23 | 2 |
barrier cell | 5.28e-16 | 3 |
raphe nuclei neuron | 3.97e-15 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 3.97e-15 | 3 |
reticular formation | 3.97e-15 | 3 |
nervous system | 2.65e-09 | 75 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.