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FFCP PHASE1:Mm9::chr9:44581034..44581047,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=76568|HGNC=|MCL_coexpression_id=0|UniProt=D3YYR2|association_with_transcript=0bp_to_ENSMUST00000128150_5end|description=CAGE_peak_4_at_Ift46_5end|id=chr9:44581034..44581047,+|ontology_enrichment_celltype=CL:0000221!2.17e-15!44;CL:0000133!2.17e-15!44;CL:0002319!4.97e-15!43;CL:0000117!1.24e-14!23;CL:0000337!1.24e-14!23;CL:0000055!1.02e-12!50;CL:0000540!4.45e-12!33;CL:0000047!4.45e-12!33;CL:0000031!4.45e-12!33;CL:0000404!4.45e-12!33;CL:0000393!1.02e-10!39;CL:0000211!1.02e-10!39;CL:0002321!8.67e-10!70;CL:0000220!8.67e-10!70|ontology_enrichment_celltype_v019_2=CL:0000221,2.50e-16,44;CL:0000133,2.50e-16,44;CL:0002319,6.08e-16,43;CL:0000117,1.64e-15,23;CL:0000337,1.64e-15,23;CL:0000540,8.62e-13,33;CL:0000047,8.62e-13,33;CL:0000031,8.62e-13,33;CL:0000404,8.62e-13,33;CL:0000393,3.00e-11,39;CL:0000211,3.00e-11,39;CL:0002321,4.75e-11,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.37e-14!75;UBERON:0001016!1.37e-14!75;UBERON:0001017!5.24e-14!73;UBERON:0005743!5.24e-14!73;UBERON:0004121!9.14e-11!102;UBERON:0000924!9.14e-11!102;UBERON:0006601!9.14e-11!102;UBERON:0001049!2.68e-10!52;UBERON:0005068!2.68e-10!52;UBERON:0006241!2.68e-10!52;UBERON:0007135!2.68e-10!52;UBERON:0000033!7.39e-10!63;UBERON:0002616!2.13e-09!49;UBERON:0000955!4.21e-09!50;UBERON:0006238!4.21e-09!50;UBERON:0002346!6.18e-09!71;UBERON:0003075!6.18e-09!71;UBERON:0007284!6.18e-09!71;UBERON:0002020!3.85e-08!34|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.98e-15,75;UBERON:0001017,3.68e-14,73;UBERON:0000073,5.09e-12,54;UBERON:0004121,5.38e-12,95;UBERON:0000924,5.38e-12,95;UBERON:0006601,5.38e-12,95;UBERON:0002346,5.54e-11,64;UBERON:0003075,5.54e-11,64;UBERON:0007284,5.54e-11,64;UBERON:0001049,1.72e-10,52;UBERON:0005068,1.72e-10,52;UBERON:0006241,1.72e-10,52;UBERON:0007135,1.72e-10,52;UBERON:0010371,1.20e-08,73;UBERON:0002020,2.08e-08,34;UBERON:0002616,5.22e-08,46;UBERON:0000955,1.67e-07,47;UBERON:0006238,1.67e-07,47|phase1_expression=1.60148847104794,3.48975407639361,5.45999087267443,6.0492842261366,2.00358291978539,1.6787927191189,1.63528848416868,0.903863264091034,0,0,0,0.0797721589953364,1.36960583944965,0.874204024189974,0,0,0,0.157731082679119,0.411343300817216,0,7.82398269389842,0.0992909512008853,0.522399578277871,3.83981814704176,2.52350209173887,3.44539178469012,5.59990595006797,2.37018355954478,4.18051522804023,2.77233142735924,1.77384408524244,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0.418531630736908,1.5626706890476,2.61761871986899,2.35292595212406,2.73218193983378,5.82612423637384,0.755380907853464,1.01376931219515,2.0190142737785,5.47673941043627,4.36050312760893,1.09843091367236,3.11087838518853,3.21968769738334,4.31257693094915,0.671130424230945,0.725362142011344,0,0.514518872071894,3.15186783932632,1.54701627683233,8.09265843438391,5.28990979272033,8.87363964908651,2.37191172448392,3.55717918444456,1.3498495759221,0.988866362566974,1.4209602298922,1.79760066311043,2.30530983192933,3.94020526772215,3.91517221161903,6.73039876324422,7.42692559449889,4.19650227808066,2.9397791811589,6.80502844229478,3.67687514644008,6.60695285996332,6.76742891851495,6.45147439676223,6.85808696197008,9.42322729104819,6.77187381723788,7.2587579740359,4.50210088025344,7.02871939773326,7.07108605136802,5.55249555116501,2.42319279572891,1.96888102666279,2.79614772395106,0.289864488701678,0,1.3599426674155,1.61910957491345,0.649776417447669,0.448026887097336,1.26399978118577,1.1930122580464,2.07828803682295,1.41335829804136,2.53518155598025,2.56652954828636,0,0,1.29894624606728,1.26679932737549,0.505524445014783,2.51204535381932,0.517875767294343,0.742210695324124,1.04091196059682,0.913396434936424,1.15307748628029,0.753613202763113,0.587943535678524,1.25666591329675,0.741584903203122,0.578397427679647,0,1.13236794963186,0.662524555381181,0,0,1.46390398505774,2.51336048176146,2.04365644166873,0,0.599902730993408,0.254140454146129,3.2953940669061,0.457500602818626,3.5183218591602,2.60736480288415,2.04572365864264,2.49345653471472,1.46017136760982,1.12023300235348,0.746441823660558,0.758168275301024,0.841767423545896,2.08192708740326,2.5289231487682,2.52086981727489,1.9591626318643,1.2246569847239,1.5373646434182,2.62364828767241,1.03481348295606,2.37124792226126,1.51284864134255,2.99116911078713,3.28793598641362,2.78047249225598,2.089512999133,1.4404749548556,2.18937693500343,0,1.02939162845886,0.284163499395593,1.24275463521301,0.703578179943289,1.80062061461015,1.42046841351126,1.18058539048442,1.07986979021165,2.09280550275367,1.3413670069981,0.700592054203017,0.987359099480883,1.31333971263276,1.21603214318784,0.730999937126662,1.09775057645525,0.805238512562231,1.47202963994889,1.3377599609307,2.97376904685418,2.11560453330835,1.49301775374664,1.85789337488351,0.902072229254653,0.605050573870028,0.889512175379481,1.71203063501303,1.89811624617805,0.658795818896044,1.75934646160189,0.994782360205754,1.55971269695296,0.898819408654221,2.37751854862164,1.9914127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|EntrezGene=76568
|HGNC=
|MCL_coexpression_id=0
|UniProt=D3YYR2
|association_with_transcript=0bp_to_ENSMUST00000128150_5end
|description=CAGE_peak_4_at_Ift46_5end
|id=chr9:44581034..44581047,+
|ontology_enrichment_celltype=CL:0000221!2.17e-15!44;CL:0000133!2.17e-15!44;CL:0002319!4.97e-15!43;CL:0000117!1.24e-14!23;CL:0000337!1.24e-14!23;CL:0000055!1.02e-12!50;CL:0000540!4.45e-12!33;CL:0000047!4.45e-12!33;CL:0000031!4.45e-12!33;CL:0000404!4.45e-12!33;CL:0000393!1.02e-10!39;CL:0000211!1.02e-10!39;CL:0002321!8.67e-10!70;CL:0000220!8.67e-10!70
|ontology_enrichment_celltype_v019_2=CL:0000221,2.50e-16,44;CL:0000133,2.50e-16,44;CL:0002319,6.08e-16,43;CL:0000117,1.64e-15,23;CL:0000337,1.64e-15,23;CL:0000540,8.62e-13,33;CL:0000047,8.62e-13,33;CL:0000031,8.62e-13,33;CL:0000404,8.62e-13,33;CL:0000393,3.00e-11,39;CL:0000211,3.00e-11,39;CL:0002321,4.75e-11,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.37e-14!75;UBERON:0001016!1.37e-14!75;UBERON:0001017!5.24e-14!73;UBERON:0005743!5.24e-14!73;UBERON:0004121!9.14e-11!102;UBERON:0000924!9.14e-11!102;UBERON:0006601!9.14e-11!102;UBERON:0001049!2.68e-10!52;UBERON:0005068!2.68e-10!52;UBERON:0006241!2.68e-10!52;UBERON:0007135!2.68e-10!52;UBERON:0000033!7.39e-10!63;UBERON:0002616!2.13e-09!49;UBERON:0000955!4.21e-09!50;UBERON:0006238!4.21e-09!50;UBERON:0002346!6.18e-09!71;UBERON:0003075!6.18e-09!71;UBERON:0007284!6.18e-09!71;UBERON:0002020!3.85e-08!34
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.98e-15,75;UBERON:0001017,3.68e-14,73;UBERON:0000073,5.09e-12,54;UBERON:0004121,5.38e-12,95;UBERON:0000924,5.38e-12,95;UBERON:0006601,5.38e-12,95;UBERON:0002346,5.54e-11,64;UBERON:0003075,5.54e-11,64;UBERON:0007284,5.54e-11,64;UBERON:0001049,1.72e-10,52;UBERON:0005068,1.72e-10,52;UBERON:0006241,1.72e-10,52;UBERON:0007135,1.72e-10,52;UBERON:0010371,1.20e-08,73;UBERON:0002020,2.08e-08,34;UBERON:0002616,5.22e-08,46;UBERON:0000955,1.67e-07,47;UBERON:0006238,1.67e-07,47
|phase1_expression=1.60148847104794,3.48975407639361,5.45999087267443,6.0492842261366,2.00358291978539,1.6787927191189,1.63528848416868,0.903863264091034,0,0,0,0.0797721589953364,1.36960583944965,0.874204024189974,0,0,0,0.157731082679119,0.411343300817216,0,7.82398269389842,0.0992909512008853,0.522399578277871,3.83981814704176,2.52350209173887,3.44539178469012,5.59990595006797,2.37018355954478,4.18051522804023,2.77233142735924,1.77384408524244,0,0,0,0.288851619751275,0.664938581433969,0.612508068787107,0.418531630736908,1.5626706890476,2.61761871986899,2.35292595212406,2.73218193983378,5.82612423637384,0.755380907853464,1.01376931219515,2.0190142737785,5.47673941043627,4.36050312760893,1.09843091367236,3.11087838518853,3.21968769738334,4.31257693094915,0.671130424230945,0.725362142011344,0,0.514518872071894,3.15186783932632,1.54701627683233,8.09265843438391,5.28990979272033,8.87363964908651,2.37191172448392,3.55717918444456,1.3498495759221,0.988866362566974,1.4209602298922,1.79760066311043,2.30530983192933,3.94020526772215,3.91517221161903,6.73039876324422,7.42692559449889,4.19650227808066,2.9397791811589,6.80502844229478,3.67687514644008,6.60695285996332,6.76742891851495,6.45147439676223,6.85808696197008,9.42322729104819,6.77187381723788,7.2587579740359,4.50210088025344,7.02871939773326,7.07108605136802,5.55249555116501,2.42319279572891,1.96888102666279,2.79614772395106,0.289864488701678,0,1.3599426674155,1.61910957491345,0.649776417447669,0.448026887097336,1.26399978118577,1.1930122580464,2.07828803682295,1.41335829804136,2.53518155598025,2.56652954828636,0,0,1.29894624606728,1.26679932737549,0.505524445014783,2.51204535381932,0.517875767294343,0.742210695324124,1.04091196059682,0.913396434936424,1.15307748628029,0.753613202763113,0.587943535678524,1.25666591329675,0.741584903203122,0.578397427679647,0,1.13236794963186,0.662524555381181,0,0,1.46390398505774,2.51336048176146,2.04365644166873,0,0.599902730993408,0.254140454146129,3.2953940669061,0.457500602818626,3.5183218591602,2.60736480288415,2.04572365864264,2.49345653471472,1.46017136760982,1.12023300235348,0.746441823660558,0.758168275301024,0.841767423545896,2.08192708740326,2.5289231487682,2.52086981727489,1.9591626318643,1.2246569847239,1.5373646434182,2.62364828767241,1.03481348295606,2.37124792226126,1.51284864134255,2.99116911078713,3.28793598641362,2.78047249225598,2.089512999133,1.4404749548556,2.18937693500343,0,1.02939162845886,0.284163499395593,1.24275463521301,0.703578179943289,1.80062061461015,1.42046841351126,1.18058539048442,1.07986979021165,2.09280550275367,1.3413670069981,0.700592054203017,0.987359099480883,1.31333971263276,1.21603214318784,0.730999937126662,1.09775057645525,0.805238512562231,1.47202963994889,1.3377599609307,2.97376904685418,2.11560453330835,1.49301775374664,1.85789337488351,0.902072229254653,0.605050573870028,0.889512175379481,1.71203063501303,1.89811624617805,0.658795818896044,1.75934646160189,0.994782360205754,1.55971269695296,0.898819408654221,2.37751854862164,1.99141273254367,0.948339504765408,0.799739588268102,0,1.83286195060783,1.74557238450863,0.771494018793504,1.01178459398812,1.47610147979602,1.56998727841375,0.370191491765402,0.592905254174298,0.83422552858047,0.196558995113203,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,0.575392274901621,0.972811360650212,2.19649130550465,0,0.372140947668503,1.87222603868736,1.26289438973556,1.61457672169721,0.482443521363367,1.29327233116623,1.32643988239339,1.14075483509418,1.18821560042632,0.938760993154008,1.00503754465089,0.476087281772027,0.585400943573396,0.945810864637146,0.44292937929755,0.637819074629948,0.491589944147214,1.20879487306127,0.433947175744535,4.52373851817817,2.17562273527484,0.983528546038072,1.10374698521893,2.88991061978026,2.81308047821288,0.655739781506702,0.252470927204373,1.89304931649754,1.56175497718655,1.29254038639679,1.67278158566786,0.222798674082394,0.849229592366497,2.42886421004937,1.46127928955656,2.37172666767914,0.963963949265421,0.851640511249612,0.890328018336276,0.977321756121456,0.659880491890142,2.65490276679926,1.45668381692989,0.906970670894253,1.32023555829129,1.18120757152309,1.53717573971964,1.55056975900933,2.18120237686503,2.49548164869305,1.8962205476149,0,3.09406629744561,1.02131881726136,0.900305470156551,4.01011919726539,2.35770738534752,1.59606210278046,1.07021290561242,2.30368628842969,0.608929898229199,0.469343416127421,1.0591603543191,0.661585194164886,0.32977250588296,0.484393280087717,1.14594557363496,0.716234064018819,0.656563598980245,0.874442509889552,1.8542530201051,0.341741761595705,1.23832120777933,0.555583582109135,0.188368457004691,0,0.228778173206523,0.679913719975421,0.279902904647316,0,0.954670618015114,0.790839983952838,1.62655573701479,0.86404272657441,0.418176592028937,1.31017538247707,0.944050424693745,0.743881101528023,1.30877970992015,1.94422459937689,1.86401793926078,21.4203316699992,1.64468200648377,1.32366792365678,2.13896307178452,2.32487682259916,1.68956125490778,0.469428954583016,0.651021924219751,0.943734099831398,14.2534631287344,15.5536203379247,0.948033361884535,2.02725215290164,1.64337531463724,1.16928740680016,1.25318686967237,0.993406773906324,0.841368146639782,1.18151621739662,0.807731599585181,0.381034033274999,0.403304740547362,0.682205165178267,1.44317762460494,0.350630706544707,0.906921534460845,3.32978930061097,1.34570784914214,0.671538465456314,1.73870634628971,0.375364950902364,0.549454872801795,0.857473516316263,2.00628841614145,2.82375921308533,1.38097570952153,0.572895513439397,2.749650917499,0.685082519770642,0.755393897389701,0.675022500231806,2.2516060161211,1.81256963593682,2.07104124700728,2.07574695168353,4.38927360741134,2.39027048055788,0.972426868273176,1.25767897576789,1.65459157605013,0.888986911206461,1.03017528619447,0.64183841918363,1.26348605881899,1.77435509923168,1.69763707247469,2.34103768674706,2.11283002936069,2.06767688240208,2.85776214769844,1.85414921511769,2.31491064556446,2.47251540481984,0.883193520806384,0,1.77475806159337,1.90748951957857,1.30811774969096,1.78807822789128,1.01537529470012,1.46342378298218,0.789209134313529,1.90125759384206,0.561142271657738,0.830445126869219,1.67457620038458,1.63692417267876,3.40861050609125,1.73615949883027,1.74867404556562,1.63752125911786,0.214871054048298,1.14772999241306,0.661774257358546,0.463735671240843
|short_description=p4@Ift46
}}

Revision as of 17:57, 14 September 2013

Short description:p4@Ift46
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Ift46_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 0bp_to_ENSMUST00000128150_5end
EntrezGene:Ift46
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p4@Ift46

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.83
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.92
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.03
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F13.52
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D41.96
eyeball, neonate N00.CNhs11207.633-15C61.22
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.34
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A32.12
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C74.01
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.15
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G521.42
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H314.25
testis, neonate N30.CNhs11130.1391-42E215.55
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.50e-1644
neurectodermal cell2.50e-1644
neural cell6.08e-1643
CNS neuron (sensu Vertebrata)1.64e-1523
neuroblast (sensu Vertebrata)1.64e-1523
neuron8.62e-1333
neuronal stem cell8.62e-1333
neuroblast8.62e-1333
electrically signaling cell8.62e-1333
electrically responsive cell3.00e-1139
electrically active cell3.00e-1139
embryonic cell4.75e-1170

Uber anatomy
Ontology termp-valuen
nervous system8.98e-1575
central nervous system3.68e-1473
regional part of nervous system5.09e-1254
ectoderm-derived structure5.38e-1295
ectoderm5.38e-1295
presumptive ectoderm5.38e-1295
neurectoderm5.54e-1164
neural plate5.54e-1164
presumptive neural plate5.54e-1164
neural tube1.72e-1052
neural rod1.72e-1052
future spinal cord1.72e-1052
neural keel1.72e-1052
ecto-epithelium1.20e-0873
gray matter2.08e-0834
regional part of brain5.22e-0846
brain1.67e-0747
future brain1.67e-0747







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