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FFCP PHASE1:Mm9::chr1:9738457..9738532,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=70675|HGNC=|UniProt=Q8CDG3,Q80T83|association_with_transcript=0bp_to_ENSMUST00000057438,NM_173443,uc007ags.1_5end|description=CAGE_peak_1_at_Vcpip1_5end|id=chr1:9738457..9738532,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.34e-10!63;UBERON:0000475!1.00e-09!200;UBERON:0001049!1.75e-09!52;UBERON:0005068!1.75e-09!52;UBERON:0006241!1.75e-09!52;UBERON:0007135!1.75e-09!52;UBERON:0000955!1.92e-09!50;UBERON:0006238!1.92e-09!50;UBERON:0002616!5.74e-09!49;UBERON:0004111!1.14e-08!122;UBERON:0002020!1.31e-08!34;UBERON:0007811!1.38e-08!86;UBERON:0000477!3.47e-08!154;UBERON:0000025!4.05e-08!114;UBERON:0002346!8.04e-08!71;UBERON:0003075!8.04e-08!71;UBERON:0007284!8.04e-08!71;UBERON:0000062!2.41e-07!269;UBERON:0003056!3.43e-07!49;UBERON:0002791!5.31e-07!29;UBERON:0003528!5.31e-07!29;UBERON:0001893!5.31e-07!29;UBERON:0000153!6.85e-07!94;UBERON:0003080!7.18e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.35e-10,54;UBERON:0001049,1.75e-09,52;UBERON:0005068,1.75e-09,52;UBERON:0006241,1.75e-09,52;UBERON:0007135,1.75e-09,52;UBERON:0004111,1.14e-08,122;UBERON:0002020,1.31e-08,34;UBERON:0002346,2.65e-08,64;UBERON:0003075,2.65e-08,64;UBERON:0007284,2.65e-08,64;UBERON:0000025,4.05e-08,114;UBERON:0010371,6.85e-08,73;UBERON:0000955,7.44e-08,47;UBERON:0006238,7.44e-08,47;UBERON:0010314,1.73e-07,92;UBERON:0002616,2.08e-07,46;UBERON:0003056,3.43e-07,49;UBERON:0003528,5.31e-07,29;UBERON:0002791,5.31e-07,29;UBERON:0001893,5.31e-07,29;UBERON:0003080,7.18e-07,40|phase1_expression=12.6517589212787,20.2405736430829,11.3749809847384,14.8207463540347,13.023288978605,9.9048770428015,3.03696432774183,9.68424925811822,9.714421828465,5.61754863172784,5.65019295144166,5.10541817570153,9.41604014621631,10.4904482902797,11.6588416635482,7.28910962603373,13.2916756844348,6.46697438984387,10.1464680868247,5.09267582157636,16.4133549991565,5.75887516965135,3.13439746966722,5.59973479776923,5.73523202667925,10.3361753540704,5.1691439539089,6.03319451520489,5.51067916423484,5.79669298447841,5.09980174507201,6.35030673459631,6.1506478758457,0,6.35473563452804,3.98963148860382,6.32925004413344,21.7636447983192,7.0320181007142,15.1821885752402,8.2352408324342,13.6609096991689,21.3624555333708,8.3091899863881,8.81979301609777,11.7469921383476,3.12956537739216,3.70642765846759,4.61340983742391,6.80504646759992,4.33957907038624,0,13.4226084846189,8.70434570413613,11.0910953717013,7.71778308107841,10.3152038377952,12.3761302146586,8.49729135610311,10.5798195854407,3.80298842103708,4.40497891689872,6.22506357277798,3.5995988691256,1.97773272513395,2.8419204597844,3.59520132622086,4.99483796918021,12.4427534770173,9.99043943654511,9.88527318351495,10.5690864229407,13.9147180799517,10.4117179332711,12.3640657613525,10.1114066527102,26.4278114398533,36.3908913542785,34.4078634493985,8.17694983927202,14.2720724019759,10.4182674111352,19.5428099300967,25.3243174514256,28.7260705820403,17.9723437138937,16.3727432918968,15.6575534493252,6.43672643332064,8.38844317185319,8.69593466105033,3.44169550792555,10.1995700056163,14.0322829825832,18.8435161059824,9.85659151614138,11.2355536105401,8.18065548374677,7.79358013808606,7.42013106471715,12.3942209403479,11.5493829672886,10.1922095882658,14.2213340630666,3.46385665617943,2.53359865475099,4.54972000513305,14.1588010851634,9.32176381129818,11.2816025689267,6.93941307064543,3.34912026143355,8.53277339847416,10.5505848386836,12.5819916635204,13.4463252722753,9.64060374164058,7.66376591675532,7.96149496754887,12.2942805960031,8.61281921995535,8.727754556434,1.86391761218122,23.1296829639122,19.8974371472782,7.40825460104915,1.91704199209472,1.79970819298022,3.55796635804581,23.0677584683427,16.9275223042892,20.356005042284,24.509229147111,24.2929684463814,23.8956251243494,23.0382593556216,12.8317598451399,9.70374370758726,3.79084137650512,11.1534183619831,6.63614259109789,6.89706313300419,10.4436035287103,9.79581315932148,12.7228253412983,12.4270308676304,15.1796793786761,17.5918292102531,6.25147179505242,9.26619792822314,9.32540958068929,8.11024209982027,6.95118123063995,8.00979983000983,6.79081050146213,9.35461054046918,0.702213187313235,2.05878325691772,2.55747149456033,6.21377317606506,7.50483391939508,7.38254451990161,7.81257627431194,6.88674811115913,9.71882811190483,12.7893669612724,10.7309360559848,12.6106569756543,12.0128690436841,11.8200574136949,12.2413902414242,11.1111990443253,7.02560368931362,9.26024289446565,21.449574753541,17.0821656549612,11.2342386214491,7.66906643324278,9.59797127408553,8.12828351511535,8.76298736990235,9.07575860805041,6.89371935919098,10.2721838100782,9.01605216934572,11.0348299665087,10.8074139784116,13.5290400987983,8.77338392036041,12.5834717211591,8.21324589523838,9.16049856970089,4.36236172192088,9.13988100877831,10.1436962105772,7.94240178596726,9.89157684554891,11.6425461017929,12.2046516649817,11.2183712464498,12.71689695515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|EntrezGene=70675
|HGNC=
|UniProt=Q8CDG3,Q80T83
|association_with_transcript=0bp_to_ENSMUST00000057438,NM_173443,uc007ags.1_5end
|description=CAGE_peak_1_at_Vcpip1_5end
|id=chr1:9738457..9738532,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!2.34e-10!63;UBERON:0000475!1.00e-09!200;UBERON:0001049!1.75e-09!52;UBERON:0005068!1.75e-09!52;UBERON:0006241!1.75e-09!52;UBERON:0007135!1.75e-09!52;UBERON:0000955!1.92e-09!50;UBERON:0006238!1.92e-09!50;UBERON:0002616!5.74e-09!49;UBERON:0004111!1.14e-08!122;UBERON:0002020!1.31e-08!34;UBERON:0007811!1.38e-08!86;UBERON:0000477!3.47e-08!154;UBERON:0000025!4.05e-08!114;UBERON:0002346!8.04e-08!71;UBERON:0003075!8.04e-08!71;UBERON:0007284!8.04e-08!71;UBERON:0000062!2.41e-07!269;UBERON:0003056!3.43e-07!49;UBERON:0002791!5.31e-07!29;UBERON:0003528!5.31e-07!29;UBERON:0001893!5.31e-07!29;UBERON:0000153!6.85e-07!94;UBERON:0003080!7.18e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.35e-10,54;UBERON:0001049,1.75e-09,52;UBERON:0005068,1.75e-09,52;UBERON:0006241,1.75e-09,52;UBERON:0007135,1.75e-09,52;UBERON:0004111,1.14e-08,122;UBERON:0002020,1.31e-08,34;UBERON:0002346,2.65e-08,64;UBERON:0003075,2.65e-08,64;UBERON:0007284,2.65e-08,64;UBERON:0000025,4.05e-08,114;UBERON:0010371,6.85e-08,73;UBERON:0000955,7.44e-08,47;UBERON:0006238,7.44e-08,47;UBERON:0010314,1.73e-07,92;UBERON:0002616,2.08e-07,46;UBERON:0003056,3.43e-07,49;UBERON:0003528,5.31e-07,29;UBERON:0002791,5.31e-07,29;UBERON:0001893,5.31e-07,29;UBERON:0003080,7.18e-07,40
|phase1_expression=12.6517589212787,20.2405736430829,11.3749809847384,14.8207463540347,13.023288978605,9.9048770428015,3.03696432774183,9.68424925811822,9.714421828465,5.61754863172784,5.65019295144166,5.10541817570153,9.41604014621631,10.4904482902797,11.6588416635482,7.28910962603373,13.2916756844348,6.46697438984387,10.1464680868247,5.09267582157636,16.4133549991565,5.75887516965135,3.13439746966722,5.59973479776923,5.73523202667925,10.3361753540704,5.1691439539089,6.03319451520489,5.51067916423484,5.79669298447841,5.09980174507201,6.35030673459631,6.1506478758457,0,6.35473563452804,3.98963148860382,6.32925004413344,21.7636447983192,7.0320181007142,15.1821885752402,8.2352408324342,13.6609096991689,21.3624555333708,8.3091899863881,8.81979301609777,11.7469921383476,3.12956537739216,3.70642765846759,4.61340983742391,6.80504646759992,4.33957907038624,0,13.4226084846189,8.70434570413613,11.0910953717013,7.71778308107841,10.3152038377952,12.3761302146586,8.49729135610311,10.5798195854407,3.80298842103708,4.40497891689872,6.22506357277798,3.5995988691256,1.97773272513395,2.8419204597844,3.59520132622086,4.99483796918021,12.4427534770173,9.99043943654511,9.88527318351495,10.5690864229407,13.9147180799517,10.4117179332711,12.3640657613525,10.1114066527102,26.4278114398533,36.3908913542785,34.4078634493985,8.17694983927202,14.2720724019759,10.4182674111352,19.5428099300967,25.3243174514256,28.7260705820403,17.9723437138937,16.3727432918968,15.6575534493252,6.43672643332064,8.38844317185319,8.69593466105033,3.44169550792555,10.1995700056163,14.0322829825832,18.8435161059824,9.85659151614138,11.2355536105401,8.18065548374677,7.79358013808606,7.42013106471715,12.3942209403479,11.5493829672886,10.1922095882658,14.2213340630666,3.46385665617943,2.53359865475099,4.54972000513305,14.1588010851634,9.32176381129818,11.2816025689267,6.93941307064543,3.34912026143355,8.53277339847416,10.5505848386836,12.5819916635204,13.4463252722753,9.64060374164058,7.66376591675532,7.96149496754887,12.2942805960031,8.61281921995535,8.727754556434,1.86391761218122,23.1296829639122,19.8974371472782,7.40825460104915,1.91704199209472,1.79970819298022,3.55796635804581,23.0677584683427,16.9275223042892,20.356005042284,24.509229147111,24.2929684463814,23.8956251243494,23.0382593556216,12.8317598451399,9.70374370758726,3.79084137650512,11.1534183619831,6.63614259109789,6.89706313300419,10.4436035287103,9.79581315932148,12.7228253412983,12.4270308676304,15.1796793786761,17.5918292102531,6.25147179505242,9.26619792822314,9.32540958068929,8.11024209982027,6.95118123063995,8.00979983000983,6.79081050146213,9.35461054046918,0.702213187313235,2.05878325691772,2.55747149456033,6.21377317606506,7.50483391939508,7.38254451990161,7.81257627431194,6.88674811115913,9.71882811190483,12.7893669612724,10.7309360559848,12.6106569756543,12.0128690436841,11.8200574136949,12.2413902414242,11.1111990443253,7.02560368931362,9.26024289446565,21.449574753541,17.0821656549612,11.2342386214491,7.66906643324278,9.59797127408553,8.12828351511535,8.76298736990235,9.07575860805041,6.89371935919098,10.2721838100782,9.01605216934572,11.0348299665087,10.8074139784116,13.5290400987983,8.77338392036041,12.5834717211591,8.21324589523838,9.16049856970089,4.36236172192088,9.13988100877831,10.1436962105772,7.94240178596726,9.89157684554891,11.6425461017929,12.2046516649817,11.2183712464498,12.7168969551514,9.50158162197864,12.1545577105731,5.83957870006329,7.86235980452812,10.1187950573184,7.70868461276311,8.92355491083942,9.16653066413111,10.9324532231308,18.159145398804,8.51140380883053,18.6898668485561,11.9085103253921,12.1694692514679,10.1031551178845,15.4281775628844,15.4381926836277,12.1937105509959,6.253216588426,7.82231886921724,6.45031325945715,11.9692026627136,7.20276906999808,6.42717830392237,10.1469496886055,9.93101407869003,10.6303051031412,12.756381492599,16.877921415721,13.8147985492716,13.018415272336,6.03165135757089,4.35124547054968,10.3270497333998,7.45029215022778,27.1330497079368,26.7242645430223,9.67216177722385,9.08895337935743,5.04813151066011,6.63745865304285,6.89354872744957,6.4521575447189,6.90675889655422,7.64306633129848,8.09621403349789,9.05993159525067,7.11518000303742,20.8858855674175,8.65834519770439,6.58842733568844,12.8680697889325,12.2077890999676,10.619611067197,4.61283208694465,8.76738315197778,9.6188590675508,9.15435867930396,7.37844355065426,13.6966995379157,10.1789444253702,11.4079161083111,12.3254335594968,16.8669773719998,8.25084345985495,13.6175842301515,9.36317688962813,3.49268446213437,8.14480733120051,7.98031051390231,11.2372355089304,11.3538824215463,7.30715877875038,9.38686832254841,12.2862601101016,10.1443063105282,8.244312647074,7.42736362801165,11.0975781867807,8.23669173621642,10.833299383174,15.7399651780119,26.8866687915239,7.34744787430767,10.5257302661243,10.7412825874433,12.4323181623096,17.4968611482912,13.0403558727718,9.34881364966204,6.57771825921193,6.21899882119907,1.90934123603023,6.01038387804157,10.3692928234693,7.56037385752609,8.15444354456428,7.20596460362386,6.87808166562586,9.09188012978695,9.16145796944104,9.59150802359267,10.5627683224777,21.4203316699992,14.6526215123099,10.9202603701684,16.3338998209,15.1116993468945,13.3475339137715,17.3688713195716,23.8274024264429,21.1815875739936,23.6752438409486,18.4339204005034,9.16432249821717,6.68993210457542,6.88163413004343,7.9251702016455,6.80301443536429,10.1327490938445,9.49544051207754,10.1905773750458,13.3275713931555,12.1930890648,9.88096614341037,10.7203668813728,14.8166236126107,15.5446279901487,10.6563280299149,9.10142408833665,11.3039459327939,8.89788466729616,10.2390484837061,7.69498149349846,9.34073283763052,8.1459984050045,10.0314420807073,14.1187960654267,11.0478056761722,13.7494923225455,11.6860163993708,18.4972280338073,14.3524840504043,17.550585006027,13.0593148935024,15.406841905463,18.1216109113137,9.54843597774425,3.99024873401031,6.65861062441123,9.96737539980005,9.22297915563122,9.37601893095072,6.66740183404846,6.38708677440572,5.13470735346904,8.84440241173291,7.09742039692671,7.9223063382152,9.92599979180754,12.22880410933,12.3486258254569,8.09699275181225,11.5884325944855,12.1532808892134,11.5384052224926,9.42073088860143,8.57173130963539,6.56660482789549,8.10683045820891,7.26732083161643,9.59915680236372,9.13837765230106,8.41468675214754,8.68130047744881,13.3088031568945,7.2948495315506,8.77899134118889,11.9190423674432,6.95692773388472,8.83139994760006,9.45242393807593,7.24450676020043,6.55008503647143,9.66919743217342,6.12122662620299,7.72069966918304,7.41977073985349
|short_description=p1@Vcpip1
}}

Revision as of 21:22, 13 September 2013

Short description:p1@Vcpip1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vcpip1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000057438, NM_173443, uc007ags.1_5end
EntrezGene:Vcpip1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vcpip1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I520.24
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.82
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.41
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I26.03
Ileum epithelium, pool1.CNhs13199.10252-104B95.51
Ileum epithelium, pool2.CNhs13232.10253-104C15.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H421.36
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.31
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.81
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.99
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.36
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D734.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E419.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E525.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I628.73
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.66
Mouse Schwann, donor1.CNhs12507.11728-123D96.44
Mouse Schwann, donor2.CNhs12573.11746-123F98.39
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.03
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.42
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.16
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D711.28
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F510.55
adrenal gland, neonate N00.CNhs11191.1311-23C112.58
adrenal gland, neonate N25.CNhs11223.1377-27I313.45
amnion, adult pregnant day17.5.CNhs10488.583-22A89.64
aorta, adult.CNhs10498.46-23H17.66
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F512.29
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B223.13
cerebellum, neonate N30.CNhs11135.1395-42I219.90
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A423.07
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F120.36
cortex, adult.CNhs10473.12-14D524.51
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F223.90
diencephalon, neonate N30.CNhs11201.1388-42B223.04
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.70
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G411.15
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E26.90
eyeball, embryo E15.CNhs10593.426-16C910.44
eyeball, embryo E17.CNhs11023.1261-18D49.80
eyeball, neonate N00.CNhs11207.633-15C612.72
eyeball, neonate N01.CNhs11140.1532-43E712.43
eyeball, neonate N02.CNhs11205.1551-44G815.18
eyeball, neonate N16.CNhs11188.777-19A217.59
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E76.95
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B56.79
gonad, embryo E13.CNhs11044.1564-45I69.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I97.38
heart, embryo E14.CNhs10597.403-26D47.81
heart, embryo E15.CNhs11017.431-16C86.89
heart, embryo E16.CNhs11021.457-17C69.72
heart, embryo E17.CNhs11025.479-18E512.79
heart, embryo E18.CNhs11030.1283-20G310.73
heart, neonate N00.CNhs11213.639-21E312.61
heart, neonate N03.CNhs11221.1349-25I212.01
heart, neonate N10.CNhs11118.749-24G111.82
heart, neonate N16.CNhs11209.782-15G112.24
heart, neonate N20.CNhs11127.821-26I611.11
heart, neonate N25.CNhs11196.1351-25D37.03
heart, neonate N30.CNhs11202.1390-42D29.26
hippocampus, adult.CNhs10478.13-16E821.45
hippocampus, neonate N00.CNhs11228.627-43G117.08
intestinal mucosa, adult.CNhs10506.860-29I311.23
intestine, adult.CNhs10496.178-9A37.67
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D88.76
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F710.27
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E911.03
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F213.53
intestine, neonate N10.CNhs11098.755-23A58.77
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E38.21
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F89.14
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C79.89
kidney, neonate N00.CNhs11214.646-21G711.64
kidney, neonate N10.CNhs11206.758-6D512.20
kidney, neonate N20.CNhs11113.832-19I111.22
kidney, neonate N25.CNhs11122.1353-25F312.72
kidney, neonate N30.CNhs11203.1385-42H19.50
liver, adult pregnant day01.CNhs10466.508-5B212.15
liver, embryo E12.CNhs10601.355-15F85.84
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E110.12
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A39.17
liver, embryo E18.CNhs10579.499-43G410.93
liver, neonate N00.CNhs11117.641-24F418.16
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B912.17
liver, neonate N20.CNhs11220.823-25A310.10
liver, neonate N25.CNhs11198.1368-26H115.43
liver, neonate N30.CNhs11106.1382-42D115.44
lung, adult.CNhs10474.28-22B112.19
lung, embryo E12.CNhs10522.354-16G26.25
lung, embryo E14.CNhs10604.404-26F87.82
lung, embryo E15.CNhs11020.432-17C56.45
lung, embryo E16.CNhs10998.458-17B611.97
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C610.15
lung, neonate N06.CNhs11212.683-20E59.93
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E612.76
lung, neonate N20.CNhs11109.822-18A416.88
lung, neonate N25.CNhs11119.1359-25C713.81
lung, neonate N30.CNhs11133.1394-42H213.02
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B610.33
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C227.13
medulla oblongata, neonate N30.CNhs11200.1396-42A326.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.09
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.89
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.64
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.10
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I920.89
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I412.87
oviduct, adult pregnant day01.CNhs10500.988-6G612.21
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F44.61
pancreas, embryo E15.CNhs11042.1556-45F28.77
pancreas, embryo E16.CNhs11003.460-26E59.62
pancreas, embryo E17.CNhs10599.1558-45G39.15
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G913.70
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D811.41
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E69.36
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A58.14
pituitary gland, embryo E15.CNhs10592.427-16B97.98
pituitary gland, embryo E16.CNhs11036.449-43F611.24
pituitary gland, embryo E17.CNhs11039.1265-44F511.35
pituitary gland, neonate N00.CNhs11190.1308-22E97.31
placenta, adult pregnant day10.CNhs10472.539-13I79.39
placenta, adult pregnant day17.CNhs10464.577-18G312.29
prostate, adult.CNhs10470.859-1F810.14
skin, adult.CNhs10492.30-1C38.24
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H311.10
skin, neonate N06.CNhs11097.693-20I58.24
skin, neonate N10.CNhs11108.762-6C410.83
small intestine, neonate N16.CNhs11114.790-21I115.74
spinal cord, adult.CNhs10505.24-13C926.89
spleen, adult.CNhs10465.25-2G27.35
spleen, embryo E16.CNhs11035.461-43C110.53
spleen, embryo E18.CNhs11011.1271-21F210.74
spleen, neonate N10.CNhs11116.752-24D112.43
spleen, neonate N20.CNhs11112.824-19H117.50
spleen, neonate N25.CNhs11099.1354-25G313.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.22
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G810.37
stomach, embryo E16.CNhs11022.459-17D47.56
stomach, embryo E17.CNhs11006.1035-18D58.15
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B86.88
stomach, neonate N07.CNhs11210.718-18A99.09
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I19.59
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G521.42
testis, embryo E13.CNhs11031.389-23F514.65
testis, embryo E15.CNhs11034.443-27C510.92
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I515.11
testis, embryo E18.CNhs11027.503-18G513.35
testis, neonate N00.CNhs11189.1300-22B717.37
testis, neonate N07.CNhs11222.726-26I423.83
testis, neonate N10.CNhs11204.763-44D921.18
testis, neonate N20.CNhs11110.839-18H323.68
testis, neonate N30.CNhs11130.1391-42E218.43
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I26.88
thymus, embryo E16.CNhs11002.456-26C57.93
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F89.50
thymus, neonate N03.CNhs11137.2104-43C710.19
thymus, neonate N06.CNhs11197.681-26C413.33
thymus, neonate N07.CNhs11211.713-19D312.19
thymus, neonate N10.CNhs11194.748-24E49.88
thymus, neonate N20.CNhs11186.820-7A210.72
thymus, neonate N25.CNhs11125.1362-25G714.82
thymus, neonate N30.CNhs11132.1393-42G215.54
tongue, adult.CNhs10499.32-1B410.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.30
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.90
urinary bladder, adult.CNhs10481.879-12E410.24
uterus, adult pregnant day19.CNhs10497.590-15F57.69
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D58.15
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I89.55
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D29.97
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F29.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.15
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.14
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.41
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F99.45
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C29.67
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B47.42





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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