FFCP PHASE1:Mm9::chr18:45719084..45719136,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=140492|HGNC=|MCL_coexpression_id=1717|UniProt=Q540U9|association_with_transcript=79bp_to_uc008evg.1,uc012bco.1_5end|description=CAGE_peak_1_at_Kcnn2_5end|id=chr18:45719084..45719136,+|ontology_enrichment_celltype=CL:0000221!5.32e-15!44;CL:0000133!5.32e-15!44;CL:0002319!6.49e-15!43;CL:0000540!8.46e-14!33;CL:0000047!8.46e-14!33;CL:0000031!8.46e-14!33;CL:0000404!8.46e-14!33;CL:0000117!1.74e-11!23;CL:0000337!1.74e-11!23;CL:0000055!1.88e-10!50;CL:0000393!1.21e-08!39;CL:0000211!1.21e-08!39|ontology_enrichment_celltype_v019_2=CL:0000221,6.72e-17,44;CL:0000133,6.72e-17,44;CL:0002319,8.58e-17,43;CL:0000540,4.35e-16,33;CL:0000047,4.35e-16,33;CL:0000031,4.35e-16,33;CL:0000404,4.35e-16,33;CL:0000117,2.42e-13,23;CL:0000337,2.42e-13,23;CL:0000393,1.78e-11,39;CL:0000211,1.78e-11,39;CL:0002321,1.33e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.13e-32!73;UBERON:0005743!1.13e-32!73;UBERON:0000073!3.97e-31!75;UBERON:0001016!3.97e-31!75;UBERON:0004121!1.06e-30!102;UBERON:0000924!1.06e-30!102;UBERON:0006601!1.06e-30!102;UBERON:0002346!3.92e-28!71;UBERON:0003075!3.92e-28!71;UBERON:0007284!3.92e-28!71;UBERON:0001049!3.82e-24!52;UBERON:0005068!3.82e-24!52;UBERON:0006241!3.82e-24!52;UBERON:0007135!3.82e-24!52;UBERON:0000955!5.79e-24!50;UBERON:0006238!5.79e-24!50;UBERON:0002616!2.50e-23!49;UBERON:0000033!1.07e-22!63;UBERON:0002020!2.83e-19!34;UBERON:0003080!7.20e-19!40;UBERON:0002780!2.86e-18!39;UBERON:0001890!2.86e-18!39;UBERON:0006240!2.86e-18!39;UBERON:0003056!3.27e-18!49;UBERON:0002791!2.55e-17!29;UBERON:0003528!2.55e-17!29;UBERON:0001893!2.55e-17!29;UBERON:0000956!7.06e-14!21;UBERON:0001869!7.06e-14!21;UBERON:0000203!7.06e-14!21;UBERON:0002619!3.02e-11!17;UBERON:0004111!2.57e-10!122;UBERON:0000025!8.57e-10!114;UBERON:0007811!1.04e-08!86;UBERON:0000153!2.24e-08!94;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0000475!1.84e-07!200;UBERON:0000468!6.16e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.28e-36,73;UBERON:0001016,9.28e-35,75;UBERON:0000073,3.59e-28,54;UBERON:0004121,2.89e-27,95;UBERON:0000924,2.89e-27,95;UBERON:0006601,2.89e-27,95;UBERON:0001049,1.58e-26,52;UBERON:0005068,1.58e-26,52;UBERON:0006241,1.58e-26,52;UBERON:0007135,1.58e-26,52;UBERON:0002346,1.45e-25,64;UBERON:0003075,1.45e-25,64;UBERON:0007284,1.45e-25,64;UBERON:0000955,5.21e-24,47;UBERON:0006238,5.21e-24,47;UBERON:0002616,2.80e-23,46;UBERON:0002020,1.36e-22,34;UBERON:0010371,4.31e-21,73;UBERON:0003080,6.39e-21,40;UBERON:0003528,2.86e-20,29;UBERON:0002791,2.86e-20,29;UBERON:0001893,2.86e-20,29;UBERON:0002780,3.23e-20,39;UBERON:0001890,3.23e-20,39;UBERON:0006240,3.23e-20,39;UBERON:0003056,3.59e-19,49;UBERON:0010314,6.79e-19,92;UBERON:0000956,3.50e-16,21;UBERON:0001869,3.50e-16,21;UBERON:0000203,3.50e-16,21;UBERON:0002619,4.67e-13,17;UBERON:0002021,3.06e-09,10;UBERON:0000411,3.06e-09,10;UBERON:0001950,3.06e-09,10;UBERON:0004111,3.13e-09,122;UBERON:0000025,5.19e-09,114|phase1_expression=4.64431656603902,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,20.2763395433815,10.5449367712546,11.4713640453827,8.25919887589639,35.9381410912429,0,0,0,0,0,0,6.06949382578793,4.7609188134483,5.70448263155561,1.35537812827653,2.66788438833342,0,0,0,1.49800055259202,2.68952813725088,33.2843655510213,30.7813539396255,35.3345935070322,9.42648248532552,8.39300455616131,9.55428233876641,11.1180746381154,10.1114066527102,26.4278114398533,17.8762273319263,27.8027825193801,5.27545150920775,4.20843160571084,6.25096044668112,14.7966989470732,15.1945904708554,20.1693687065389,8.54422897873636,7.40332740155335,4.84638559145781,0.075726193333184,0.151143120213571,0.289864488701678,5.16254326188832,1.3599426674155,25.9057531986152,29.2399387851451,20.6092368064774,4.91555470461132,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,5.48082622651488,0,60.4159505993837,3.29622120855658,11.5696881758614,11.0695438682908,9.19408107370998,11.9940481278419,33.301646702364,0,0.144599356919912,0,0.161766849947409,0,0,0,23.4224637609238,12.3573557019938,0.255457055208591,0,0,0,22.3188052713186,24.2475319493872,5.90575454930463,37.5460531615317,24.2929684463814,16.4152555202052,18.8199865158599,1.42575109390443,0.248813941220186,1.0108910337347,2.31486041475121,1.56144531555244,0.919608417733892,1.0803727788321,0.60281927134286,1.90502197623718,1.40925092313335,1.59292931751539,1.29351685369508,0.215567992932842,0.756424320671277,1.23165786914764,2.19195732427575,1.39023624612799,1.0447564995665,1.02891068203972,0.59710280045548,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.350296027101508,0.493679549740441,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.671032093801859,45.6329188384156,16.5676425930648,0,0,0,0.464473343720877,0.644337306610467,0.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| ||
|EntrezGene=140492 | |||
|HGNC= | |||
|MCL_coexpression_id=1717 | |||
|UniProt=Q540U9 | |||
|association_with_transcript=79bp_to_uc008evg.1,uc012bco.1_5end | |||
|description=CAGE_peak_1_at_Kcnn2_5end | |||
|id=chr18:45719084..45719136,+ | |||
|ontology_enrichment_celltype=CL:0000221!5.32e-15!44;CL:0000133!5.32e-15!44;CL:0002319!6.49e-15!43;CL:0000540!8.46e-14!33;CL:0000047!8.46e-14!33;CL:0000031!8.46e-14!33;CL:0000404!8.46e-14!33;CL:0000117!1.74e-11!23;CL:0000337!1.74e-11!23;CL:0000055!1.88e-10!50;CL:0000393!1.21e-08!39;CL:0000211!1.21e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.72e-17,44;CL:0000133,6.72e-17,44;CL:0002319,8.58e-17,43;CL:0000540,4.35e-16,33;CL:0000047,4.35e-16,33;CL:0000031,4.35e-16,33;CL:0000404,4.35e-16,33;CL:0000117,2.42e-13,23;CL:0000337,2.42e-13,23;CL:0000393,1.78e-11,39;CL:0000211,1.78e-11,39;CL:0002321,1.33e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.13e-32!73;UBERON:0005743!1.13e-32!73;UBERON:0000073!3.97e-31!75;UBERON:0001016!3.97e-31!75;UBERON:0004121!1.06e-30!102;UBERON:0000924!1.06e-30!102;UBERON:0006601!1.06e-30!102;UBERON:0002346!3.92e-28!71;UBERON:0003075!3.92e-28!71;UBERON:0007284!3.92e-28!71;UBERON:0001049!3.82e-24!52;UBERON:0005068!3.82e-24!52;UBERON:0006241!3.82e-24!52;UBERON:0007135!3.82e-24!52;UBERON:0000955!5.79e-24!50;UBERON:0006238!5.79e-24!50;UBERON:0002616!2.50e-23!49;UBERON:0000033!1.07e-22!63;UBERON:0002020!2.83e-19!34;UBERON:0003080!7.20e-19!40;UBERON:0002780!2.86e-18!39;UBERON:0001890!2.86e-18!39;UBERON:0006240!2.86e-18!39;UBERON:0003056!3.27e-18!49;UBERON:0002791!2.55e-17!29;UBERON:0003528!2.55e-17!29;UBERON:0001893!2.55e-17!29;UBERON:0000956!7.06e-14!21;UBERON:0001869!7.06e-14!21;UBERON:0000203!7.06e-14!21;UBERON:0002619!3.02e-11!17;UBERON:0004111!2.57e-10!122;UBERON:0000025!8.57e-10!114;UBERON:0007811!1.04e-08!86;UBERON:0000153!2.24e-08!94;UBERON:0002021!4.99e-08!10;UBERON:0000411!4.99e-08!10;UBERON:0001950!4.99e-08!10;UBERON:0000475!1.84e-07!200;UBERON:0000468!6.16e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.28e-36,73;UBERON:0001016,9.28e-35,75;UBERON:0000073,3.59e-28,54;UBERON:0004121,2.89e-27,95;UBERON:0000924,2.89e-27,95;UBERON:0006601,2.89e-27,95;UBERON:0001049,1.58e-26,52;UBERON:0005068,1.58e-26,52;UBERON:0006241,1.58e-26,52;UBERON:0007135,1.58e-26,52;UBERON:0002346,1.45e-25,64;UBERON:0003075,1.45e-25,64;UBERON:0007284,1.45e-25,64;UBERON:0000955,5.21e-24,47;UBERON:0006238,5.21e-24,47;UBERON:0002616,2.80e-23,46;UBERON:0002020,1.36e-22,34;UBERON:0010371,4.31e-21,73;UBERON:0003080,6.39e-21,40;UBERON:0003528,2.86e-20,29;UBERON:0002791,2.86e-20,29;UBERON:0001893,2.86e-20,29;UBERON:0002780,3.23e-20,39;UBERON:0001890,3.23e-20,39;UBERON:0006240,3.23e-20,39;UBERON:0003056,3.59e-19,49;UBERON:0010314,6.79e-19,92;UBERON:0000956,3.50e-16,21;UBERON:0001869,3.50e-16,21;UBERON:0000203,3.50e-16,21;UBERON:0002619,4.67e-13,17;UBERON:0002021,3.06e-09,10;UBERON:0000411,3.06e-09,10;UBERON:0001950,3.06e-09,10;UBERON:0004111,3.13e-09,122;UBERON:0000025,5.19e-09,114 | |||
|phase1_expression=4.64431656603902,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,20.2763395433815,10.5449367712546,11.4713640453827,8.25919887589639,35.9381410912429,0,0,0,0,0,0,6.06949382578793,4.7609188134483,5.70448263155561,1.35537812827653,2.66788438833342,0,0,0,1.49800055259202,2.68952813725088,33.2843655510213,30.7813539396255,35.3345935070322,9.42648248532552,8.39300455616131,9.55428233876641,11.1180746381154,10.1114066527102,26.4278114398533,17.8762273319263,27.8027825193801,5.27545150920775,4.20843160571084,6.25096044668112,14.7966989470732,15.1945904708554,20.1693687065389,8.54422897873636,7.40332740155335,4.84638559145781,0.075726193333184,0.151143120213571,0.289864488701678,5.16254326188832,1.3599426674155,25.9057531986152,29.2399387851451,20.6092368064774,4.91555470461132,0,0,0,1.97180787687353,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,5.48082622651488,0,60.4159505993837,3.29622120855658,11.5696881758614,11.0695438682908,9.19408107370998,11.9940481278419,33.301646702364,0,0.144599356919912,0,0.161766849947409,0,0,0,23.4224637609238,12.3573557019938,0.255457055208591,0,0,0,22.3188052713186,24.2475319493872,5.90575454930463,37.5460531615317,24.2929684463814,16.4152555202052,18.8199865158599,1.42575109390443,0.248813941220186,1.0108910337347,2.31486041475121,1.56144531555244,0.919608417733892,1.0803727788321,0.60281927134286,1.90502197623718,1.40925092313335,1.59292931751539,1.29351685369508,0.215567992932842,0.756424320671277,1.23165786914764,2.19195732427575,1.39023624612799,1.0447564995665,1.02891068203972,0.59710280045548,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0,0.350296027101508,0.493679549740441,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.671032093801859,45.6329188384156,16.5676425930648,0,0,0,0.464473343720877,0.644337306610467,0.403367049246685,0.444756087689741,0.380451252225118,0,0,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0,0.379335801906163,0.799739588268102,1.1270773567308,0.610953983535943,0.581857461502877,0.561086559122548,0.442655759869801,1.77132177575523,2.66897837330337,0.987177311374404,13.933273473096,0,0.196558995113203,0,0.202860121388503,0,0,0.863088412352432,1.29708181420028,1.37280706594041,1.43768206527355,2.23284568601102,3.43241440426017,13.8918382870911,12.5578189465339,9.64887042726734,0.739012760666419,0.568474235311454,0.325929952884052,0,0,0,0.238043640886014,0,0.788175720530955,0.8858587585951,0.478364305972461,0.655453258862952,0.518054945597687,0.723245292907558,0,0,0,0.827810238914197,17.0183625387059,14.417037450841,0,0.252470927204373,2.52406575533005,1.56175497718655,3.66219776145758,3.34556317133573,2.67358408898873,4.24614796183249,4.85772842009873,3.79932615284705,7.11518000303742,22.8138134659483,1.27746076687442,0.178065603667255,1.14020871547503,1.97964147567043,2.65490276679926,1.21390318077491,0.302323556964751,0.754420319023592,1.47650946440386,0.922305443831782,0.516856586336442,0.363533729477506,1.78248689192361,0.948110273807448,1.05418608574999,3.09406629744561,7.48967132658334,0.900305470156551,0.517434735131018,1.28602221018955,3.3694644392032,2.14042581122485,2.46823530903181,2.13125464380219,0,0.21183207086382,0.661585194164886,0.32977250588296,0.484393280087717,0.180938774784468,0.716234064018819,0.656563598980245,0.291480836629851,15.0194494628513,0,1.44470807574256,0.740778109478847,0,0,0,0,0,0,0,0.474503990371703,1.01659733563424,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.826534557253359,0,0,0,0,0.299033092087958,0.496375471371293,1.16670713006429,0.645799117388655,0.337912250981556,1.05621514781179,1.17183946359555,0.209718688851422,0.241584120826006,0.288030006257865,0,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0.147689527174577,0,0,0,0.194915761479505,0,0,1.13365191807606,0.887943813496259,2.6017018416748,0.335769232728157,4.44336066274038,0.187682475451182,0.73260649706906,0.857473516316263,2.50786052017682,28.8023439734704,41.8895965221531,42.9671635079547,33.3395173746754,39.0497036269266,24.9279986138601,24.9758325085768,42.7805143063009,45.7673833074047,46.5984280576638,0.31136204275253,2.39414924040619,1.19513524027894,4.132814190161,1.04806581313991,2.02227859295016,3.77819437262746,2.67845574410562,2.56735367673452,2.02157769411038,2.5347929989024,3.2066478035633,2.90288673156635,2.30490548657529,2.64203157195821,4.28664322154766,2.66533949673168,2.12200142510076,0.824171801606613,1.61918812147837,2.74295401908332,1.4198064492747,1.90748951957857,2.47088908274958,2.25862512996793,2.03075058940024,1.64635175585495,1.8414879800649,2.71608227691724,3.92799590160417,2.72860541685601,1.87158516513571,4.09231043169689,1.85924209423159,3.2794123866794,5.74564329257276,0.935726433781634,1.28922632428979,1.3390183244819,0.441182838239031,0.92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| |||
|short_description=p1@Kcnn2 | |||
}} |
Revision as of 16:15, 13 September 2013
Short description: | p1@Kcnn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1717 |
Association with transcript: | 79bp_to_uc008evg.1, uc012bco.1_5end |
EntrezGene: | Kcnn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.72e-17 | 44 |
neurectodermal cell | 6.72e-17 | 44 |
neural cell | 8.58e-17 | 43 |
neuron | 4.35e-16 | 33 |
neuronal stem cell | 4.35e-16 | 33 |
neuroblast | 4.35e-16 | 33 |
electrically signaling cell | 4.35e-16 | 33 |
CNS neuron (sensu Vertebrata) | 2.42e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.42e-13 | 23 |
electrically responsive cell | 1.78e-11 | 39 |
electrically active cell | 1.78e-11 | 39 |
embryonic cell | 1.33e-07 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.