FFCP PHASE1:Mm9::chr10:79487040..79487063,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=115|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:79487040..79487063,-|id=chr10:79487040..79487063,-|ontology_enrichment_celltype=CL:0000988!2.12e-19!32;CL:0002032!2.12e-19!32;CL:0000037!2.12e-19!32;CL:0000566!2.12e-19!32;CL:0000837!2.12e-19!32;CL:0000791!2.34e-12!9;CL:0000789!2.34e-12!9;CL:0002420!2.34e-12!9;CL:0002419!2.34e-12!9;CL:0000790!2.34e-12!9;CL:0002320!7.93e-12!46;CL:0000134!7.93e-12!46;CL:0002031!3.02e-11!25;CL:0000738!3.16e-11!17;CL:0002087!3.16e-11!17;CL:0000838!5.32e-11!12;CL:0000624!7.21e-11!8;CL:0000049!1.54e-10!19;CL:0000219!2.53e-10!54;CL:0000542!5.23e-10!13;CL:0000051!5.23e-10!13;CL:0000084!8.09e-10!11;CL:0000827!8.09e-10!11;CL:0000893!1.39e-07!6;CL:0002489!1.39e-07!6;CL:0000898!1.39e-07!6;CL:0000809!1.39e-07!6;CL:0000810!1.39e-07!6;CL:0000895!1.39e-07!6;CL:0000808!1.39e-07!6;CL:0000894!1.39e-07!6;CL:0000806!1.39e-07!6;CL:0000807!1.39e-07!6;CL:0000805!1.39e-07!6;CL:0002425!1.39e-07!6;CL:0002436!1.39e-07!6;CL:0002427!1.39e-07!6;CL:0002428!1.39e-07!6;CL:0002429!1.39e-07!6;CL:0002433!1.39e-07!6;CL:0002431!1.39e-07!6;CL:0002432!1.39e-07!6;CL:0000557!2.64e-07!7|ontology_enrichment_celltype_v019_2=CL:0000049,1.83e-22,19;CL:0000557,5.02e-20,7;CL:0000988,2.91e-13,32;CL:0002032,2.91e-13,32;CL:0000037,2.91e-13,32;CL:0000837,2.91e-13,32;CL:0002320,3.87e-09,46;CL:0000134,3.87e-09,46;CL:0000763,5.62e-09,16;CL:0000219,9.85e-08,54;CL:0000034,6.95e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.28e-17!48;UBERON:0002390!1.41e-15!45;UBERON:0003061!1.41e-15!45;UBERON:0002384!7.93e-12!46;UBERON:0002370!4.21e-10!23;UBERON:0000974!4.21e-10!23;UBERON:0004807!4.21e-10!23;UBERON:0005058!4.21e-10!23;UBERON:0003351!4.21e-10!23;UBERON:0009113!4.21e-10!23;UBERON:0003295!4.21e-10!23;UBERON:0009722!4.21e-10!23;UBERON:0005562!4.21e-10!23;UBERON:0007690!4.21e-10!23;UBERON:0004177!4.34e-10!29;UBERON:0002405!4.92e-10!70;UBERON:0006562!1.48e-09!24;UBERON:0003408!1.48e-09!24;UBERON:0001557!1.48e-09!24;UBERON:0001042!1.48e-09!24;UBERON:0008814!1.48e-09!24;UBERON:0009145!1.48e-09!24;UBERON:0000065!3.44e-08!41;UBERON:0000072!3.66e-08!27;UBERON:0001004!6.70e-08!42|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.03e-09,1;UBERON:0001097,1.03e-09,1;UBERON:0003968,1.03e-09,1;UBERON:0001467,1.03e-09,1;UBERON:0002384,3.87e-09,46;UBERON:0002371,5.62e-09,16|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.422366166455,0.234064526321993,0.171217968225505,0,0.856003649656029,0.699363219351979,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0,0.639969691173627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59445373517761,2.99951365496704,2.79554499560742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.28673953557358,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,1.50791283939272,0.54390568381871,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0.376736914009382,0.136694227721025,0,2.20971958992012,1.81936888020755,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.360586348559907,0,0.201932899896295,0,0.201652370273681,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:79487040..79487063,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:79487040..79487063,- | |||
|id=chr10:79487040..79487063,- | |||
|ontology_enrichment_celltype=CL:0000988!2.12e-19!32;CL:0002032!2.12e-19!32;CL:0000037!2.12e-19!32;CL:0000566!2.12e-19!32;CL:0000837!2.12e-19!32;CL:0000791!2.34e-12!9;CL:0000789!2.34e-12!9;CL:0002420!2.34e-12!9;CL:0002419!2.34e-12!9;CL:0000790!2.34e-12!9;CL:0002320!7.93e-12!46;CL:0000134!7.93e-12!46;CL:0002031!3.02e-11!25;CL:0000738!3.16e-11!17;CL:0002087!3.16e-11!17;CL:0000838!5.32e-11!12;CL:0000624!7.21e-11!8;CL:0000049!1.54e-10!19;CL:0000219!2.53e-10!54;CL:0000542!5.23e-10!13;CL:0000051!5.23e-10!13;CL:0000084!8.09e-10!11;CL:0000827!8.09e-10!11;CL:0000893!1.39e-07!6;CL:0002489!1.39e-07!6;CL:0000898!1.39e-07!6;CL:0000809!1.39e-07!6;CL:0000810!1.39e-07!6;CL:0000895!1.39e-07!6;CL:0000808!1.39e-07!6;CL:0000894!1.39e-07!6;CL:0000806!1.39e-07!6;CL:0000807!1.39e-07!6;CL:0000805!1.39e-07!6;CL:0002425!1.39e-07!6;CL:0002436!1.39e-07!6;CL:0002427!1.39e-07!6;CL:0002428!1.39e-07!6;CL:0002429!1.39e-07!6;CL:0002433!1.39e-07!6;CL:0002431!1.39e-07!6;CL:0002432!1.39e-07!6;CL:0000557!2.64e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.83e-22,19;CL:0000557,5.02e-20,7;CL:0000988,2.91e-13,32;CL:0002032,2.91e-13,32;CL:0000037,2.91e-13,32;CL:0000837,2.91e-13,32;CL:0002320,3.87e-09,46;CL:0000134,3.87e-09,46;CL:0000763,5.62e-09,16;CL:0000219,9.85e-08,54;CL:0000034,6.95e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.28e-17!48;UBERON:0002390!1.41e-15!45;UBERON:0003061!1.41e-15!45;UBERON:0002384!7.93e-12!46;UBERON:0002370!4.21e-10!23;UBERON:0000974!4.21e-10!23;UBERON:0004807!4.21e-10!23;UBERON:0005058!4.21e-10!23;UBERON:0003351!4.21e-10!23;UBERON:0009113!4.21e-10!23;UBERON:0003295!4.21e-10!23;UBERON:0009722!4.21e-10!23;UBERON:0005562!4.21e-10!23;UBERON:0007690!4.21e-10!23;UBERON:0004177!4.34e-10!29;UBERON:0002405!4.92e-10!70;UBERON:0006562!1.48e-09!24;UBERON:0003408!1.48e-09!24;UBERON:0001557!1.48e-09!24;UBERON:0001042!1.48e-09!24;UBERON:0008814!1.48e-09!24;UBERON:0009145!1.48e-09!24;UBERON:0000065!3.44e-08!41;UBERON:0000072!3.66e-08!27;UBERON:0001004!6.70e-08!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.03e-09,1;UBERON:0001097,1.03e-09,1;UBERON:0003968,1.03e-09,1;UBERON:0001467,1.03e-09,1;UBERON:0002384,3.87e-09,46;UBERON:0002371,5.62e-09,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.422366166455,0.234064526321993,0.171217968225505,0,0.856003649656029,0.699363219351979,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0,0.0850432901510698,0,0,0.639969691173627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0.167782606057736,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59445373517761,2.99951365496704,2.79554499560742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.28673953557358,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.289298117163023,1.50791283939272,0.54390568381871,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0,0,0,0,0,0,0,0,0.376736914009382,0.136694227721025,0,2.20971958992012,1.81936888020755,0.690999869022119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.360586348559907,0,0.201932899896295,0,0.201652370273681,0.38983152295901,0.192423683280659,0.467507608726276,0,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:79487040..79487063,- | |||
}} |
Revision as of 17:33, 12 September 2013
Short description: | p@chr10:79487040..79487063, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:79487040..79487063, - |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.83e-22 | 19 |
granulocyte monocyte progenitor cell | 5.02e-20 | 7 |
hematopoietic cell | 2.91e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.91e-13 | 32 |
hematopoietic stem cell | 2.91e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.91e-13 | 32 |
connective tissue cell | 3.87e-09 | 46 |
mesenchymal cell | 3.87e-09 | 46 |
myeloid cell | 5.62e-09 | 16 |
motile cell | 9.85e-08 | 54 |
stem cell | 6.95e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.03e-09 | 1 |
axillary lymph node | 1.03e-09 | 1 |
peripheral lymph node | 1.03e-09 | 1 |
shoulder | 1.03e-09 | 1 |
connective tissue | 3.87e-09 | 46 |
bone marrow | 5.62e-09 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.