FFCP PHASE1:Mm9::chr3:7503423..7503503,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67306|HGNC=|MCL_coexpression_id=780|UniProt=Q8BJH1|association_with_transcript=0bp_to_ENSMUST00000051064,ENSMUST00000099249,NM_173181,uc008oog.1,uc012cnc.1_5end|description=CAGE_peak_1_at_Fam164a_5end|id=chr3:7503423..7503503,+|ontology_enrichment_celltype=CL:0000393!3.65e-12!39;CL:0000211!3.65e-12!39;CL:0000117!1.76e-10!23;CL:0000337!1.76e-10!23;CL:0000540!2.91e-09!33;CL:0000047!2.91e-09!33;CL:0000031!2.91e-09!33;CL:0000404!2.91e-09!33;CL:0000055!1.53e-08!50;CL:0000221!9.53e-07!44;CL:0000133!9.53e-07!44|ontology_enrichment_celltype_v019_2=CL:0000393,3.65e-12,39;CL:0000211,3.65e-12,39;CL:0000117,1.76e-10,23;CL:0000337,1.76e-10,23;CL:0000540,2.90e-09,33;CL:0000047,2.90e-09,33;CL:0000031,2.90e-09,33;CL:0000404,2.90e-09,33;CL:0000221,9.53e-07,44;CL:0000133,9.53e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!6.60e-21!63;UBERON:0001017!3.45e-20!73;UBERON:0005743!3.45e-20!73;UBERON:0001049!8.10e-20!52;UBERON:0005068!8.10e-20!52;UBERON:0006241!8.10e-20!52;UBERON:0007135!8.10e-20!52;UBERON:0000073!1.07e-19!75;UBERON:0001016!1.07e-19!75;UBERON:0000955!1.97e-19!50;UBERON:0006238!1.97e-19!50;UBERON:0002616!5.76e-19!49;UBERON:0002346!1.47e-18!71;UBERON:0003075!1.47e-18!71;UBERON:0007284!1.47e-18!71;UBERON:0004121!3.84e-18!102;UBERON:0000924!3.84e-18!102;UBERON:0006601!3.84e-18!102;UBERON:0003056!5.14e-17!49;UBERON:0002020!1.10e-16!34;UBERON:0003080!8.11e-16!40;UBERON:0002780!2.84e-15!39;UBERON:0001890!2.84e-15!39;UBERON:0006240!2.84e-15!39;UBERON:0002791!6.08e-15!29;UBERON:0003528!6.08e-15!29;UBERON:0001893!6.08e-15!29;UBERON:0004111!1.61e-13!122;UBERON:0000025!5.90e-13!114;UBERON:0000956!8.07e-11!21;UBERON:0001869!8.07e-11!21;UBERON:0000203!8.07e-11!21;UBERON:0000153!1.96e-09!94;UBERON:0002619!2.94e-09!17;UBERON:0007811!4.59e-09!86;UBERON:0002021!4.77e-08!10;UBERON:0000411!4.77e-08!10;UBERON:0001950!4.77e-08!10;UBERON:0000468!2.36e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.27e-21,64;UBERON:0003075,4.27e-21,64;UBERON:0007284,4.27e-21,64;UBERON:0000073,6.38e-21,54;UBERON:0001017,3.45e-20,73;UBERON:0004121,7.48e-20,95;UBERON:0000924,7.48e-20,95;UBERON:0006601,7.48e-20,95;UBERON:0001049,8.08e-20,52;UBERON:0005068,8.08e-20,52;UBERON:0006241,8.08e-20,52;UBERON:0007135,8.08e-20,52;UBERON:0001016,1.07e-19,75;UBERON:0010371,1.36e-19,73;UBERON:0010314,3.76e-18,92;UBERON:0000955,8.72e-18,47;UBERON:0006238,8.72e-18,47;UBERON:0002616,2.50e-17,46;UBERON:0003056,5.13e-17,49;UBERON:0002020,1.10e-16,34;UBERON:0003080,8.10e-16,40;UBERON:0002780,2.83e-15,39;UBERON:0001890,2.83e-15,39;UBERON:0006240,2.83e-15,39;UBERON:0003528,6.08e-15,29;UBERON:0002791,6.08e-15,29;UBERON:0001893,6.08e-15,29;UBERON:0004111,1.66e-13,122;UBERON:0000025,6.08e-13,114;UBERON:0000956,8.06e-11,21;UBERON:0001869,8.06e-11,21;UBERON:0000203,8.06e-11,21;UBERON:0002619,2.94e-09,17;UBERON:0002021,4.77e-08,10;UBERON:0000411,4.77e-08,10;UBERON:0001950,4.77e-08,10|phase1_expression=30.7485786441204,3.14077866875425,1.81999695755814,1.20985684522732,1.00179145989269,4.36486106970913,3.27057696833736,0.258246646883153,0,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,1.99865857089398,2.42970320867791,0.699561878128147,2.20823515750766,2.19383093769182,1.27316895539409,29.5950649725723,3.67376519443276,1.56719873483361,4.47978783821539,4.12936705920906,2.29692785646008,1.29228598847722,3.44753972297422,4.94060890586572,3.52842181663903,5.09980174507201,0.635030673459631,0,0,3.75507105676657,2.99222361645286,4.69589519403449,0.418531630736908,4.6880120671428,2.09409497589519,1.76469446409304,2.04913645487534,1.94204141212461,64.9627580753979,67.5170361921967,57.4501334266063,21.9069576417451,16.5699118849139,17.5748946187577,27.6090456685482,16.9383570166689,8.62515386189829,1.17447824240415,1.45072428402269,0,39.3606937134999,46.4184172700786,50.5358650431893,51.3883810583378,40.7323054039465,37.3960528068646,24.0579617769084,20.4537803105562,8.09909745553259,4.94433181283487,7.104801149461,12.2836045312546,13.0634223809329,46.3492567018895,33.8864905212544,37.437843120546,28.2794474559766,29.3755159465646,46.7914853001124,37.7631155811851,39.5264078242309,51.7544640697127,55.5439920670567,51.3045821075853,45.1051104037263,56.3563884590843,56.7795573906868,40.7607178542016,50.6486349028512,51.493009500785,51.5600024578918,57.2334156812394,64.8670071472046,17.3412982732991,23.2760405128899,36.8127900651131,6.88339101585109,2.719885334831,0.539703191637817,1.29955283489534,2.24013443548668,11.2355536105401,58.1167399991177,45.462550805502,49.820880005958,30.844708931093,47.4807966432976,63.7013099266614,14.2213340630666,24.0305055522448,22.5490280272838,26.2872711407687,10.1623652949963,14.7594593678888,20.1881309128162,18.5629299639765,18.5723941770406,15.2206228188999,18.6896074285252,23.0473865985981,10.6816602630224,16.3148678704687,34.1254482330991,4.42305275974937,15.8531512948461,7.72945314611377,7.75800405016355,14.9113408974498,57.9705978082863,52.99001682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| ||
|EntrezGene=67306 | |||
|HGNC= | |||
|MCL_coexpression_id=780 | |||
|UniProt=Q8BJH1 | |||
|association_with_transcript=0bp_to_ENSMUST00000051064,ENSMUST00000099249,NM_173181,uc008oog.1,uc012cnc.1_5end | |||
|description=CAGE_peak_1_at_Fam164a_5end | |||
|id=chr3:7503423..7503503,+ | |||
|ontology_enrichment_celltype=CL:0000393!3.65e-12!39;CL:0000211!3.65e-12!39;CL:0000117!1.76e-10!23;CL:0000337!1.76e-10!23;CL:0000540!2.91e-09!33;CL:0000047!2.91e-09!33;CL:0000031!2.91e-09!33;CL:0000404!2.91e-09!33;CL:0000055!1.53e-08!50;CL:0000221!9.53e-07!44;CL:0000133!9.53e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.65e-12,39;CL:0000211,3.65e-12,39;CL:0000117,1.76e-10,23;CL:0000337,1.76e-10,23;CL:0000540,2.90e-09,33;CL:0000047,2.90e-09,33;CL:0000031,2.90e-09,33;CL:0000404,2.90e-09,33;CL:0000221,9.53e-07,44;CL:0000133,9.53e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.60e-21!63;UBERON:0001017!3.45e-20!73;UBERON:0005743!3.45e-20!73;UBERON:0001049!8.10e-20!52;UBERON:0005068!8.10e-20!52;UBERON:0006241!8.10e-20!52;UBERON:0007135!8.10e-20!52;UBERON:0000073!1.07e-19!75;UBERON:0001016!1.07e-19!75;UBERON:0000955!1.97e-19!50;UBERON:0006238!1.97e-19!50;UBERON:0002616!5.76e-19!49;UBERON:0002346!1.47e-18!71;UBERON:0003075!1.47e-18!71;UBERON:0007284!1.47e-18!71;UBERON:0004121!3.84e-18!102;UBERON:0000924!3.84e-18!102;UBERON:0006601!3.84e-18!102;UBERON:0003056!5.14e-17!49;UBERON:0002020!1.10e-16!34;UBERON:0003080!8.11e-16!40;UBERON:0002780!2.84e-15!39;UBERON:0001890!2.84e-15!39;UBERON:0006240!2.84e-15!39;UBERON:0002791!6.08e-15!29;UBERON:0003528!6.08e-15!29;UBERON:0001893!6.08e-15!29;UBERON:0004111!1.61e-13!122;UBERON:0000025!5.90e-13!114;UBERON:0000956!8.07e-11!21;UBERON:0001869!8.07e-11!21;UBERON:0000203!8.07e-11!21;UBERON:0000153!1.96e-09!94;UBERON:0002619!2.94e-09!17;UBERON:0007811!4.59e-09!86;UBERON:0002021!4.77e-08!10;UBERON:0000411!4.77e-08!10;UBERON:0001950!4.77e-08!10;UBERON:0000468!2.36e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.27e-21,64;UBERON:0003075,4.27e-21,64;UBERON:0007284,4.27e-21,64;UBERON:0000073,6.38e-21,54;UBERON:0001017,3.45e-20,73;UBERON:0004121,7.48e-20,95;UBERON:0000924,7.48e-20,95;UBERON:0006601,7.48e-20,95;UBERON:0001049,8.08e-20,52;UBERON:0005068,8.08e-20,52;UBERON:0006241,8.08e-20,52;UBERON:0007135,8.08e-20,52;UBERON:0001016,1.07e-19,75;UBERON:0010371,1.36e-19,73;UBERON:0010314,3.76e-18,92;UBERON:0000955,8.72e-18,47;UBERON:0006238,8.72e-18,47;UBERON:0002616,2.50e-17,46;UBERON:0003056,5.13e-17,49;UBERON:0002020,1.10e-16,34;UBERON:0003080,8.10e-16,40;UBERON:0002780,2.83e-15,39;UBERON:0001890,2.83e-15,39;UBERON:0006240,2.83e-15,39;UBERON:0003528,6.08e-15,29;UBERON:0002791,6.08e-15,29;UBERON:0001893,6.08e-15,29;UBERON:0004111,1.66e-13,122;UBERON:0000025,6.08e-13,114;UBERON:0000956,8.06e-11,21;UBERON:0001869,8.06e-11,21;UBERON:0000203,8.06e-11,21;UBERON:0002619,2.94e-09,17;UBERON:0002021,4.77e-08,10;UBERON:0000411,4.77e-08,10;UBERON:0001950,4.77e-08,10 | |||
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| |||
|short_description=p1@Fam164a | |||
}} |
Revision as of 02:32, 14 September 2013
Short description: | p1@Fam164a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam164a_5end |
Coexpression cluster: | MCL_coexpression_mm9:780 |
Association with transcript: | 0bp_to_ENSMUST00000051064, ENSMUST00000099249, NM_173181, uc008oog.1, uc012cnc.1_5end |
EntrezGene: | Fam164a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.65e-12 | 39 |
electrically active cell | 3.65e-12 | 39 |
CNS neuron (sensu Vertebrata) | 1.76e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-10 | 23 |
neuron | 2.90e-09 | 33 |
neuronal stem cell | 2.90e-09 | 33 |
neuroblast | 2.90e-09 | 33 |
electrically signaling cell | 2.90e-09 | 33 |
ectodermal cell | 9.53e-07 | 44 |
neurectodermal cell | 9.53e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.