FFCP PHASE1:Mm9::chr13:78339476..78339515,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13865|HGNC=|MCL_coexpression_id=670|UniProt=Q32NY6|association_with_transcript=-458bp_to_ENSMUST00000091458_5end|description=CAGE_peak_1_at_Nr2f1_5end|id=chr13:78339476..78339515,-|ontology_enrichment_celltype=CL:0000221!8.58e-26!44;CL:0000133!8.58e-26!44;CL:0002319!5.58e-25!43;CL:0000055!3.05e-21!50;CL:0000540!1.56e-18!33;CL:0000047!1.56e-18!33;CL:0000031!1.56e-18!33;CL:0000404!1.56e-18!33;CL:0000393!4.93e-16!39;CL:0000211!4.93e-16!39;CL:0000117!1.52e-13!23;CL:0000337!1.52e-13!23;CL:0002321!1.92e-08!70;CL:0000220!1.92e-08!70;CL:0000333!3.04e-07!10;CL:0000095!3.04e-07!10;CL:0000243!3.04e-07!10;CL:0000123!3.04e-07!10;CL:0000125!3.04e-07!10;CL:0000030!3.04e-07!10;CL:0000339!3.04e-07!10|ontology_enrichment_celltype_v019_2=CL:0000221,9.47e-32,44;CL:0000133,9.47e-32,44;CL:0002319,9.80e-31,43;CL:0000540,1.08e-22,33;CL:0000047,1.08e-22,33;CL:0000031,1.08e-22,33;CL:0000404,1.08e-22,33;CL:0000393,8.70e-18,39;CL:0000211,8.70e-18,39;CL:0000117,1.77e-16,23;CL:0000337,1.77e-16,23;CL:0002321,2.95e-13,70;CL:0000333,1.22e-08,10;CL:0000095,1.22e-08,10;CL:0000243,1.22e-08,10;CL:0000123,1.22e-08,10;CL:0000125,1.22e-08,10;CL:0000030,1.22e-08,10;CL:0000339,1.22e-08,10;CL:0002453,1.18e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.57e-34!75;UBERON:0001016!2.57e-34!75;UBERON:0001017!3.52e-33!73;UBERON:0005743!3.52e-33!73;UBERON:0004121!7.89e-32!102;UBERON:0000924!7.89e-32!102;UBERON:0006601!7.89e-32!102;UBERON:0002346!1.54e-23!71;UBERON:0003075!1.54e-23!71;UBERON:0007284!1.54e-23!71;UBERON:0000033!3.90e-23!63;UBERON:0001049!8.53e-21!52;UBERON:0005068!8.53e-21!52;UBERON:0006241!8.53e-21!52;UBERON:0007135!8.53e-21!52;UBERON:0000955!2.31e-19!50;UBERON:0006238!2.31e-19!50;UBERON:0002616!5.35e-19!49;UBERON:0003056!1.90e-18!49;UBERON:0002020!1.23e-17!34;UBERON:0003080!7.89e-16!40;UBERON:0002780!9.76e-16!39;UBERON:0001890!9.76e-16!39;UBERON:0006240!9.76e-16!39;UBERON:0002791!1.06e-14!29;UBERON:0003528!1.06e-14!29;UBERON:0001893!1.06e-14!29;UBERON:0000956!1.19e-11!21;UBERON:0001869!1.19e-11!21;UBERON:0000203!1.19e-11!21;UBERON:0007811!1.26e-10!86;UBERON:0000153!6.96e-10!94;UBERON:0002619!3.31e-09!17;UBERON:0004111!8.53e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.49e-43,75;UBERON:0001017,2.23e-41,73;UBERON:0004121,6.15e-39,95;UBERON:0000924,6.15e-39,95;UBERON:0006601,6.15e-39,95;UBERON:0002346,1.78e-30,64;UBERON:0003075,1.78e-30,64;UBERON:0007284,1.78e-30,64;UBERON:0000073,1.87e-27,54;UBERON:0010371,9.92e-27,73;UBERON:0001049,6.99e-26,52;UBERON:0005068,6.99e-26,52;UBERON:0006241,6.99e-26,52;UBERON:0007135,6.99e-26,52;UBERON:0003056,1.67e-22,49;UBERON:0000955,1.87e-22,47;UBERON:0006238,1.87e-22,47;UBERON:0002616,5.22e-22,46;UBERON:0002020,1.41e-21,34;UBERON:0010314,2.92e-20,92;UBERON:0003080,1.12e-19,40;UBERON:0002780,1.45e-19,39;UBERON:0001890,1.45e-19,39;UBERON:0006240,1.45e-19,39;UBERON:0003528,6.40e-18,29;UBERON:0002791,6.40e-18,29;UBERON:0001893,6.40e-18,29;UBERON:0000956,4.04e-14,21;UBERON:0001869,4.04e-14,21;UBERON:0000203,4.04e-14,21;UBERON:0002619,4.45e-11,17;UBERON:0000010,1.66e-07,11;UBERON:0001954,9.19e-07,7;UBERON:0003022,9.19e-07,7;UBERON:0002421,9.19e-07,7;UBERON:0000349,9.19e-07,7;UBERON:0002600,9.19e-07,7;UBERON:0003076,9.55e-07,12;UBERON:0003057,9.55e-07,12|phase1_expression=9.76907967339243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,1.46837401729345,11.7358701652206,8.28495594245697,13.4008571468028,12.0546537426056,5.87942970826523,10.062679505548,0,0,0,0.514518872071894,0.286533439938757,0,7.48570905180512,10.0508286061686,6.97214543856797,4.06613438482959,4.4464739805557,0,0.988866362566974,0,9.58720353658895,7.68436610643109,12.4427534770173,14.5806413398226,9.04397333810943,7.42692559449889,6.84692476950002,6.73699395682247,11.9806838772795,11.9498442259303,5.50579404996943,3.95830748064082,2.61131106535614,15.6944682398931,15.2784364816024,11.4600941522487,2.23346399201105,2.25105044012672,2.44477196442896,8.2496003932627,6.26435395516053,7.26957838718672,3.86203585999239,5.2144376473682,0,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,1.06001872353102,17.0420537929783,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,1.21439728736295,0.608930956624282,1.38369298353635,0.753613202763113,0.823120949949934,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,1.46390398505774,2.30391377494801,0.255457055208591,0,0,0,1.64769703345305,1.83000241127451,2.51308704225729,4.69325664519146,2.81287003063364,3.53239675751252,2.75810147215188,3.1570202793598,0.622034853050465,0.252722758433675,0.420883711772948,11.840960309606,3.44853156650209,5.22180176435513,4.52114453507145,2.51735046859913,3.20284300712124,2.34254311399322,1.03481348295606,0.431135985865684,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,1.79130840136644,0,0,0,1.6570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| ||
|EntrezGene=13865 | |||
|HGNC= | |||
|MCL_coexpression_id=670 | |||
|UniProt=Q32NY6 | |||
|association_with_transcript=-458bp_to_ENSMUST00000091458_5end | |||
|description=CAGE_peak_1_at_Nr2f1_5end | |||
|id=chr13:78339476..78339515,- | |||
|ontology_enrichment_celltype=CL:0000221!8.58e-26!44;CL:0000133!8.58e-26!44;CL:0002319!5.58e-25!43;CL:0000055!3.05e-21!50;CL:0000540!1.56e-18!33;CL:0000047!1.56e-18!33;CL:0000031!1.56e-18!33;CL:0000404!1.56e-18!33;CL:0000393!4.93e-16!39;CL:0000211!4.93e-16!39;CL:0000117!1.52e-13!23;CL:0000337!1.52e-13!23;CL:0002321!1.92e-08!70;CL:0000220!1.92e-08!70;CL:0000333!3.04e-07!10;CL:0000095!3.04e-07!10;CL:0000243!3.04e-07!10;CL:0000123!3.04e-07!10;CL:0000125!3.04e-07!10;CL:0000030!3.04e-07!10;CL:0000339!3.04e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,9.47e-32,44;CL:0000133,9.47e-32,44;CL:0002319,9.80e-31,43;CL:0000540,1.08e-22,33;CL:0000047,1.08e-22,33;CL:0000031,1.08e-22,33;CL:0000404,1.08e-22,33;CL:0000393,8.70e-18,39;CL:0000211,8.70e-18,39;CL:0000117,1.77e-16,23;CL:0000337,1.77e-16,23;CL:0002321,2.95e-13,70;CL:0000333,1.22e-08,10;CL:0000095,1.22e-08,10;CL:0000243,1.22e-08,10;CL:0000123,1.22e-08,10;CL:0000125,1.22e-08,10;CL:0000030,1.22e-08,10;CL:0000339,1.22e-08,10;CL:0002453,1.18e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.57e-34!75;UBERON:0001016!2.57e-34!75;UBERON:0001017!3.52e-33!73;UBERON:0005743!3.52e-33!73;UBERON:0004121!7.89e-32!102;UBERON:0000924!7.89e-32!102;UBERON:0006601!7.89e-32!102;UBERON:0002346!1.54e-23!71;UBERON:0003075!1.54e-23!71;UBERON:0007284!1.54e-23!71;UBERON:0000033!3.90e-23!63;UBERON:0001049!8.53e-21!52;UBERON:0005068!8.53e-21!52;UBERON:0006241!8.53e-21!52;UBERON:0007135!8.53e-21!52;UBERON:0000955!2.31e-19!50;UBERON:0006238!2.31e-19!50;UBERON:0002616!5.35e-19!49;UBERON:0003056!1.90e-18!49;UBERON:0002020!1.23e-17!34;UBERON:0003080!7.89e-16!40;UBERON:0002780!9.76e-16!39;UBERON:0001890!9.76e-16!39;UBERON:0006240!9.76e-16!39;UBERON:0002791!1.06e-14!29;UBERON:0003528!1.06e-14!29;UBERON:0001893!1.06e-14!29;UBERON:0000956!1.19e-11!21;UBERON:0001869!1.19e-11!21;UBERON:0000203!1.19e-11!21;UBERON:0007811!1.26e-10!86;UBERON:0000153!6.96e-10!94;UBERON:0002619!3.31e-09!17;UBERON:0004111!8.53e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.49e-43,75;UBERON:0001017,2.23e-41,73;UBERON:0004121,6.15e-39,95;UBERON:0000924,6.15e-39,95;UBERON:0006601,6.15e-39,95;UBERON:0002346,1.78e-30,64;UBERON:0003075,1.78e-30,64;UBERON:0007284,1.78e-30,64;UBERON:0000073,1.87e-27,54;UBERON:0010371,9.92e-27,73;UBERON:0001049,6.99e-26,52;UBERON:0005068,6.99e-26,52;UBERON:0006241,6.99e-26,52;UBERON:0007135,6.99e-26,52;UBERON:0003056,1.67e-22,49;UBERON:0000955,1.87e-22,47;UBERON:0006238,1.87e-22,47;UBERON:0002616,5.22e-22,46;UBERON:0002020,1.41e-21,34;UBERON:0010314,2.92e-20,92;UBERON:0003080,1.12e-19,40;UBERON:0002780,1.45e-19,39;UBERON:0001890,1.45e-19,39;UBERON:0006240,1.45e-19,39;UBERON:0003528,6.40e-18,29;UBERON:0002791,6.40e-18,29;UBERON:0001893,6.40e-18,29;UBERON:0000956,4.04e-14,21;UBERON:0001869,4.04e-14,21;UBERON:0000203,4.04e-14,21;UBERON:0002619,4.45e-11,17;UBERON:0000010,1.66e-07,11;UBERON:0001954,9.19e-07,7;UBERON:0003022,9.19e-07,7;UBERON:0002421,9.19e-07,7;UBERON:0000349,9.19e-07,7;UBERON:0002600,9.19e-07,7;UBERON:0003076,9.55e-07,12;UBERON:0003057,9.55e-07,12 | |||
|phase1_expression=9.76907967339243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.709638518536602,1.46837401729345,11.7358701652206,8.28495594245697,13.4008571468028,12.0546537426056,5.87942970826523,10.062679505548,0,0,0,0.514518872071894,0.286533439938757,0,7.48570905180512,10.0508286061686,6.97214543856797,4.06613438482959,4.4464739805557,0,0.988866362566974,0,9.58720353658895,7.68436610643109,12.4427534770173,14.5806413398226,9.04397333810943,7.42692559449889,6.84692476950002,6.73699395682247,11.9806838772795,11.9498442259303,5.50579404996943,3.95830748064082,2.61131106535614,15.6944682398931,15.2784364816024,11.4600941522487,2.23346399201105,2.25105044012672,2.44477196442896,8.2496003932627,6.26435395516053,7.26957838718672,3.86203585999239,5.2144376473682,0,0,0,0,0,0,0.421333260395256,0.511290967734173,0.519572009205738,1.06001872353102,17.0420537929783,0,0,0,0,0,0,0,1.03575153458869,0.148442139064825,1.21439728736295,0.608930956624282,1.38369298353635,0.753613202763113,0.823120949949934,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0,0,1.46390398505774,2.30391377494801,0.255457055208591,0,0,0,1.64769703345305,1.83000241127451,2.51308704225729,4.69325664519146,2.81287003063364,3.53239675751252,2.75810147215188,3.1570202793598,0.622034853050465,0.252722758433675,0.420883711772948,11.840960309606,3.44853156650209,5.22180176435513,4.52114453507145,2.51735046859913,3.20284300712124,2.34254311399322,1.03481348295606,0.431135985865684,0.756424320671277,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,1.79130840136644,0,0,0,1.65700618028402,1.87620847984877,1.80062061461015,1.89395788468168,0.787056926989615,0.771335564436891,0,0,0.583826711835847,0.493679549740441,0.32833492815819,0.162137619091711,0,0,0.536825675041487,3.78521907415429,10.8049842998249,0,0,3.41261200856374,1.39342003116263,0.902072229254653,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0,0,0,0,0.199141273254367,5.12103332573321,2.51346727741403,6.76246414038483,2.03651327845314,2.32742984601151,1.40271639780637,0.505892296994058,0,0,0.123397163921801,0,0.500535317148282,0.393117990226406,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0,0,0,0.184753190166605,1.89491411770485,0.977789858652155,2.03694102930226,1.17345124144251,0.167506257441816,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0,0,0,0,0,0,1.76605648986571,1.75817529888305,3.77050374366353,0,2.2085575359138,4.68526493155966,3.23135096599198,7.64700153448166,7.79795359288379,6.22768367735431,4.85772842009873,5.55286130031493,7.90575555893047,2.89189184779626,0.709700426041343,2.31485284767432,2.11753047159649,0.494910368917606,0,1.21390318077491,0.302323556964751,0.188605079755898,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,1.98067203434441,2.19909762430683,1.50035924522115,1.95074257006501,2.14042581122485,2.79733335023606,3.04464949114599,0,0,1.10264199027481,0,0.322928853391811,0.180938774784468,0.119372344003136,0.328281799490123,0,1.48340241608408,0,1.44470807574256,0.740778109478847,0.188368457004691,0,0,0,0,0,0.954670618015114,6.32671987162271,3.25311147402958,3.45617090629764,3.13632444021703,1.9652630737156,2.02296519577231,1.57041565878138,0.785267825952089,0,0.621339313086926,0,1.19613236835183,0.496375471371293,0.388902376688095,0.516639293910924,0.675824501963113,0.58678619322877,0.2604087696879,0,0,0,0,0.810900861160657,0.513554785824136,1.03936658382236,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.579568782096571,0.375364950902364,0,0.214368379079066,0.501572104035363,5.64751842617067,5.06357760157895,5.72895513439397,4.64003592327956,2.05524755931193,2.2661816921691,2.70009000092722,4.05289082901798,4.07828168085784,3.62432218226274,8.40677515431831,4.78829848081237,2.73173769206615,3.64660075602441,2.72497111416377,0.919217542250071,1.11123363900808,2.47242068686673,2.24643446714271,1.76888048234658,0.50695859978048,0.754505365544305,1.21733959710847,1.40855335290712,1.09127391015665,2.38146845641537,1.27472758539341,1.35036454324594,0,0.294397840268795,2.05721551431249,1.06485483695602,0.715308569841963,2.0348498328526,1.88218760830661,1.01537529470012,1.64635175585495,0.789209134313529,0.679020569229309,0.561142271657738,1.66089025373844,1.18205378850676,0.818462086339379,1.23949472948773,0.964533054905707,5.24602213669686,1.16965804222704,1.07435527024149,0.382576664137687,0.661774257358546,0.463735671240843 | |||
|short_description=p1@Nr2f1 | |||
}} |
Revision as of 01:09, 13 September 2013
Short description: | p1@Nr2f1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nr2f1_5end |
Coexpression cluster: | MCL_coexpression_mm9:670 |
Association with transcript: | -458bp_to_ENSMUST00000091458_5end |
EntrezGene: | Nr2f1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 9.47e-32 | 44 |
neurectodermal cell | 9.47e-32 | 44 |
neural cell | 9.80e-31 | 43 |
neuron | 1.08e-22 | 33 |
neuronal stem cell | 1.08e-22 | 33 |
neuroblast | 1.08e-22 | 33 |
electrically signaling cell | 1.08e-22 | 33 |
electrically responsive cell | 8.70e-18 | 39 |
electrically active cell | 8.70e-18 | 39 |
CNS neuron (sensu Vertebrata) | 1.77e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.77e-16 | 23 |
embryonic cell | 2.95e-13 | 70 |
migratory neural crest cell | 1.22e-08 | 10 |
neuron associated cell | 1.22e-08 | 10 |
glial cell (sensu Vertebrata) | 1.22e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.22e-08 | 10 |
glial cell | 1.22e-08 | 10 |
glioblast | 1.22e-08 | 10 |
glioblast (sensu Vertebrata) | 1.22e-08 | 10 |
oligodendrocyte precursor cell | 1.18e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.