FFCP PHASE1:Mm9::chr1:165243136..165243137,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=52|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:165243136..165243137,-|id=chr1:165243136..165243137,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,3.45e-20,3;CL:0000192,8.33e-20,3;CL:0000359,8.33e-20,3;CL:0002539,8.33e-20,3;CL:0000514,8.33e-20,3;CL:0000708,2.26e-13,2;CL:0000680,3.32e-10,6;CL:0000187,3.32e-10,6;CL:0000056,3.32e-10,6;CL:0000151,3.19e-09,3;CL:0000499,3.19e-09,3;CL:0000327,3.19e-09,3;CL:0000222,8.01e-09,7;CL:0000355,5.69e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,8.33e-20,3;UBERON:0004237,8.33e-20,3;UBERON:0004695,8.33e-20,3;UBERON:0002111,8.33e-20,3;UBERON:0004178,8.33e-20,3;UBERON:0000947,5.12e-15,4;UBERON:0001637,5.12e-15,4;UBERON:0004573,5.12e-15,4;UBERON:0003509,5.12e-15,4;UBERON:0004571,5.12e-15,4;UBERON:0010191,5.12e-15,4;UBERON:0004572,5.12e-15,4;UBERON:0003210,2.26e-13,2;UBERON:0000055,3.91e-12,5;UBERON:0007500,3.91e-12,5;UBERON:0001981,3.91e-12,5;UBERON:0002049,3.91e-12,5;UBERON:0007798,3.91e-12,5;UBERON:0004537,3.91e-12,5;UBERON:0006965,3.91e-12,5;UBERON:0000993,2.37e-07,1;UBERON:0001134,5.69e-07,9;UBERON:0002036,5.69e-07,9;UBERON:0002385,5.69e-07,9;UBERON:0000486,5.69e-07,9;UBERON:0007503,5.69e-07,9;UBERON:0001015,5.69e-07,9;UBERON:0002329,5.69e-07,9;UBERON:0003082,5.69e-07,9;UBERON:0003059,5.69e-07,9;UBERON:0007282,5.69e-07,9;UBERON:0004290,5.69e-07,9;UBERON:0009618,5.69e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.4192770370732,1.46837401729345,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0,0,0,0,1.0165335962074,1.77858959222228,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0.852151612890289,0.519572009205738,0.35333957451034,0,1.28326477414318,2.54805239706646,7.11066703153331,0,0,0,0,0,0,0.867426633830679,0,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0,0.433798070759735,0,0.485300549842228,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,0.505445516867349,0,0.260240885925407,0.919608417733892,0,0.30140963567143,0.0680364991513279,0,0.281105173679186,0,0.431135985865684,0.378212160335639,1.75951124163949,2.19195732427575,0.834141747676794,0,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.233530684734339,0,0.656669856316381,0.162137619091711,0.146199987425332,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0,0,0,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0.551873492609465,0,0,1.3114795630134,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.534196811001766,0.488660878060728,1.15479086080775,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0.583353565032143,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.399024873401031,0.853668028770671,0.729320151204882,0.838452650511929,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,1.26348605881899,0,0.377252682772152,0.37456602987953,0.192075457214608,0.229741875822453,0,0.579421629724277,0.38581844092741,0,0.588795680537589,1.02860775715625,0.532427418478012,0.476872379894642,0.436039249896986,0.564656282491984,0.0846146078916765,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.578719832943424,0.749431733813838,0.935726433781634,0,0.191288332068843,0.441182838239031,0.927471342481686|short_description=p@chr1:165243136..165243137,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:165243136..165243137,- | |||
|id=chr1:165243136..165243137,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,3.45e-20,3;CL:0000192,8.33e-20,3;CL:0000359,8.33e-20,3;CL:0002539,8.33e-20,3;CL:0000514,8.33e-20,3;CL:0000708,2.26e-13,2;CL:0000680,3.32e-10,6;CL:0000187,3.32e-10,6;CL:0000056,3.32e-10,6;CL:0000151,3.19e-09,3;CL:0000499,3.19e-09,3;CL:0000327,3.19e-09,3;CL:0000222,8.01e-09,7;CL:0000355,5.69e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,8.33e-20,3;UBERON:0004237,8.33e-20,3;UBERON:0004695,8.33e-20,3;UBERON:0002111,8.33e-20,3;UBERON:0004178,8.33e-20,3;UBERON:0000947,5.12e-15,4;UBERON:0001637,5.12e-15,4;UBERON:0004573,5.12e-15,4;UBERON:0003509,5.12e-15,4;UBERON:0004571,5.12e-15,4;UBERON:0010191,5.12e-15,4;UBERON:0004572,5.12e-15,4;UBERON:0003210,2.26e-13,2;UBERON:0000055,3.91e-12,5;UBERON:0007500,3.91e-12,5;UBERON:0001981,3.91e-12,5;UBERON:0002049,3.91e-12,5;UBERON:0007798,3.91e-12,5;UBERON:0004537,3.91e-12,5;UBERON:0006965,3.91e-12,5;UBERON:0000993,2.37e-07,1;UBERON:0001134,5.69e-07,9;UBERON:0002036,5.69e-07,9;UBERON:0002385,5.69e-07,9;UBERON:0000486,5.69e-07,9;UBERON:0007503,5.69e-07,9;UBERON:0001015,5.69e-07,9;UBERON:0002329,5.69e-07,9;UBERON:0003082,5.69e-07,9;UBERON:0003059,5.69e-07,9;UBERON:0007282,5.69e-07,9;UBERON:0004290,5.69e-07,9;UBERON:0009618,5.69e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.4192770370732,1.46837401729345,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0,0,0,0,1.0165335962074,1.77858959222228,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0.852151612890289,0.519572009205738,0.35333957451034,0,1.28326477414318,2.54805239706646,7.11066703153331,0,0,0,0,0,0,0.867426633830679,0,0.230615497256059,0.301445281105245,0.117588707135705,0.376999773989026,0,0.433798070759735,0,0.485300549842228,0,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,0.505445516867349,0,0.260240885925407,0.919608417733892,0,0.30140963567143,0.0680364991513279,0,0.281105173679186,0,0.431135985865684,0.378212160335639,1.75951124163949,2.19195732427575,0.834141747676794,0,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.233530684734339,0,0.656669856316381,0.162137619091711,0.146199987425332,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0.0701358198903186,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0,0,0,0,0,0.159454768657487,0,0.345369963731791,0,0,0,0,0.551873492609465,0,0,1.3114795630134,0.504941854408746,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.534196811001766,0.488660878060728,1.15479086080775,0,0.242780636154981,0,0,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0,0,0.170870880797853,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0.165458490457098,0.583353565032143,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.308132871494482,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.563047426353546,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.726511433089237,0.399024873401031,0.853668028770671,0.729320151204882,0.838452650511929,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,1.26348605881899,0,0.377252682772152,0.37456602987953,0.192075457214608,0.229741875822453,0,0.579421629724277,0.38581844092741,0,0.588795680537589,1.02860775715625,0.532427418478012,0.476872379894642,0.436039249896986,0.564656282491984,0.0846146078916765,0.73171189149109,0.526139422875686,0.679020569229309,0.561142271657738,0.237270036248348,0.394017929502254,0.818462086339379,0.309873682371932,0.578719832943424,0.749431733813838,0.935726433781634,0,0.191288332068843,0.441182838239031,0.927471342481686 | |||
|short_description=p@chr1:165243136..165243137,- | |||
}} |
Revision as of 19:28, 13 September 2013
Short description: | p@chr1:165243136..165243137, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:165243136..165243137, - |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 3.45e-20 | 3 |
smooth muscle cell | 8.33e-20 | 3 |
vascular associated smooth muscle cell | 8.33e-20 | 3 |
aortic smooth muscle cell | 8.33e-20 | 3 |
smooth muscle myoblast | 8.33e-20 | 3 |
leptomeningeal cell | 2.26e-13 | 2 |
muscle precursor cell | 3.32e-10 | 6 |
muscle cell | 3.32e-10 | 6 |
myoblast | 3.32e-10 | 6 |
secretory cell | 3.19e-09 | 3 |
stromal cell | 3.19e-09 | 3 |
extracellular matrix secreting cell | 3.19e-09 | 3 |
mesodermal cell | 8.01e-09 | 7 |
multi-potent skeletal muscle stem cell | 5.69e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 8.33e-20 | 3 |
blood vessel smooth muscle | 8.33e-20 | 3 |
arterial system smooth muscle | 8.33e-20 | 3 |
artery smooth muscle tissue | 8.33e-20 | 3 |
aorta smooth muscle tissue | 8.33e-20 | 3 |
aorta | 5.12e-15 | 4 |
artery | 5.12e-15 | 4 |
systemic artery | 5.12e-15 | 4 |
arterial blood vessel | 5.12e-15 | 4 |
systemic arterial system | 5.12e-15 | 4 |
aortic system | 5.12e-15 | 4 |
arterial system | 5.12e-15 | 4 |
blood-cerebrospinal fluid barrier | 2.26e-13 | 2 |
vessel | 3.91e-12 | 5 |
epithelial tube open at both ends | 3.91e-12 | 5 |
blood vessel | 3.91e-12 | 5 |
vasculature | 3.91e-12 | 5 |
vascular system | 3.91e-12 | 5 |
blood vasculature | 3.91e-12 | 5 |
vascular cord | 3.91e-12 | 5 |
oviduct | 2.37e-07 | 1 |
skeletal muscle tissue | 5.69e-07 | 9 |
striated muscle tissue | 5.69e-07 | 9 |
muscle tissue | 5.69e-07 | 9 |
multilaminar epithelium | 5.69e-07 | 9 |
epithelial vesicle | 5.69e-07 | 9 |
musculature | 5.69e-07 | 9 |
somite | 5.69e-07 | 9 |
myotome | 5.69e-07 | 9 |
presomitic mesoderm | 5.69e-07 | 9 |
presumptive segmental plate | 5.69e-07 | 9 |
dermomyotome | 5.69e-07 | 9 |
trunk paraxial mesoderm | 5.69e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.