Personal tools

FFCP PHASE1:Mm9::chr19:23215554..23215567,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=16601|HGNC=|MCL_coexpression_id=1|UniProt=Q8CEC4|association_with_transcript=-148bp_to_ENSMUST00000036884,NM_010638,uc008gzz.1_5end|description=CAGE_peak_5_at_Klf9_5end|id=chr19:23215554..23215567,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.17e-10!51;UBERON:0000033!6.76e-09!63;UBERON:0000955!5.89e-08!50;UBERON:0006238!5.89e-08!50;UBERON:0002616!1.64e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.92e-12,51;UBERON:0000955,4.75e-11,47;UBERON:0006238,4.75e-11,47;UBERON:0000073,8.59e-11,54;UBERON:0002616,2.66e-10,46;UBERON:0001017,2.66e-09,73;UBERON:0001049,2.83e-09,52;UBERON:0005068,2.83e-09,52;UBERON:0006241,2.83e-09,52;UBERON:0007135,2.83e-09,52;UBERON:0004121,6.74e-09,95;UBERON:0000924,6.74e-09,95;UBERON:0006601,6.74e-09,95;UBERON:0001016,8.53e-09,75;UBERON:0002021,1.41e-08,10;UBERON:0000411,1.41e-08,10;UBERON:0001950,1.41e-08,10;UBERON:0010314,1.86e-08,92;UBERON:0004111,2.49e-08,122;UBERON:0003080,6.75e-08,40;UBERON:0002346,8.77e-08,64;UBERON:0003075,8.77e-08,64;UBERON:0007284,8.77e-08,64;UBERON:0010371,1.26e-07,73;UBERON:0002780,3.91e-07,39;UBERON:0001890,3.91e-07,39;UBERON:0006240,3.91e-07,39;UBERON:0003056,4.08e-07,49;UBERON:0000025,9.65e-07,114|phase1_expression=1.12104192973356,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0,0.422366166455,0.936258105287974,0,0,0,0.262261207256992,0.333109761815663,0.404950534779652,0,0.315462165358238,0.137114433605739,0.42438965179803,1.44573593256819,0.297872853602656,0.522399578277871,0.639969691173627,0.22940928106717,0,0,0,0.760093677825496,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0,0,0.523523743973798,0.588231488031014,0,0,0.503587271902309,0.405507724878058,0.734187008646726,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0.419959264876088,0,0,0,0,0.257259436035947,1.14613375975503,2.06268836910977,0,0,0,0,0,0,0,0,1.19840044207362,0,0,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,6.60695285996332,3.31987079021488,3.84016333140609,0,0,0,2.51264699101243,2.25105044012672,2.59757021220577,0.294628585473668,0.569486723196412,0,0.227178579999552,0.604572480854284,1.15945795480671,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,2.52351636410202,0.346970653532272,0,0,0.452167921657868,0.587943535678524,2.13633205260448,0.247194967734374,3.90418263683761,1.76922110389975,1.61766849947409,0.883366073841574,0.969750506270444,3.72783522436244,4.68449275218475,5.02672096352292,0.510914110417183,0.359445373517761,0.599902730993408,0.381210681219194,5.54225365797844,7.32000964509802,0.502617408451458,1.73824320192276,2.81287003063364,4.98691306942944,4.54275536589721,0.916554274652847,1.99051152976149,1.76905930903572,2.94618598241064,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.612328492361951,0.640568601424249,0.187403449119458,6.98499100995342,0,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0,0.199034266818493,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.697601834251224,0.268273401399619,0.583826711835847,0.987359099480883,0.985004784474571,2.26992666728396,2.77779976108131,1.09775057645525,3.08674763148855,2.10289948564127,0.205809224758569,0.330418782983798,0.528901133327089,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0.397912944082302,0.58489226135736,0,0.216138049874694,0.398282546508734,0.379335801906163,0.114248512609729,1.1270773567308,0.203651327845314,1.16371492300575,0.701358198903186,0.505892296994058,0.885660887877613,1.255989822731,1.97435462274881,0.889357881261447,0,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,0,0,0.624075346229121,0.252578877947112,0,0.482443521363367,1.84753190166605,0,0.162964976442026,0,0.469380496577004,0.167506257441816,1.6663054862021,1.56106918286239,0.315270288212382,0.664394068946325,0.318909537314974,2.45794972073607,1.20879487306127,0.723245292907558,0,0,0.491764273019036,2.20749397043786,4.49541651965817,4.21962071731931,0.163934945376675,2.52470927204373,0.315508219416257,0,0,0.716906393857656,0.222798674082394,0,0.404810701674894,0,1.97643888973262,2.89189184779626,1.41940085208269,0,0.977321756121456,2.3095817216155,1.32745138339963,0,0,0,0,0.614870295887855,0.258428293168221,1.09060118843252,0,1.58018378967908,3.16255825724996,1.03135543248187,3.40439605753788,0,0,0.643011105094777,0.709360934569094,1.60531935841864,1.15184314421485,0.608929898229199,0,0.63549621259146,2.20528398054962,0.8244312647074,1.29171541356724,0.361877549568935,0.596861720015682,0.656563598980245,1.1659233465194,4.26478194624172,0.341741761595705,0.412773735926445,0.185194527369712,0,0.136694227721025,0.228778173206523,1.35982743995084,1.39951452323658,1.38199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.436725127492355,0,0.578574190077352,0.26175594198403,0.777689839750757,3.72803587852155,2.81846469342095,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.943734099831398,1.93267296660805,1.15212002503146,0.316011120628178,0,0,0,0.358053391334963,0,0,0,0,0.15241361331,0,0.682205165178267,0,0.467507608726276,1.81384306892169,0.221985953374065,0.0897138566094757,0.335769232728157,1.54551675225752,0.563047426353546,0.183151624267265,0,0.501572104035363,2.25900737046827,2.30162618253588,1.71868654031819,0.515559547031063,2.05524755931193,3.7769694869485,5.40018000185445,2.70192721934532,3.17199686288943,2.07104124700728,0,0,0.341467211508268,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.187283014939765,0.448176066834085,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0.887379030796687,0.476872379894642,0.726732083161643,0.188218760830661,0.25384382367503,0.548783918618318,0.789209134313529,0,0.561142271657738,0.593175090620871,0.29551344712669,0.409231043169689,0,0.192906610981141,0,1.40358965067245,0.859484216193193,1.53030665655075,1.32354851471709,1.62307484934295|short_description=p5@Klf9}}
|EntrezGene=16601
|HGNC=
|MCL_coexpression_id=1
|UniProt=Q8CEC4
|association_with_transcript=-148bp_to_ENSMUST00000036884,NM_010638,uc008gzz.1_5end
|description=CAGE_peak_5_at_Klf9_5end
|id=chr19:23215554..23215567,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!3.17e-10!51;UBERON:0000033!6.76e-09!63;UBERON:0000955!5.89e-08!50;UBERON:0006238!5.89e-08!50;UBERON:0002616!1.64e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.92e-12,51;UBERON:0000955,4.75e-11,47;UBERON:0006238,4.75e-11,47;UBERON:0000073,8.59e-11,54;UBERON:0002616,2.66e-10,46;UBERON:0001017,2.66e-09,73;UBERON:0001049,2.83e-09,52;UBERON:0005068,2.83e-09,52;UBERON:0006241,2.83e-09,52;UBERON:0007135,2.83e-09,52;UBERON:0004121,6.74e-09,95;UBERON:0000924,6.74e-09,95;UBERON:0006601,6.74e-09,95;UBERON:0001016,8.53e-09,75;UBERON:0002021,1.41e-08,10;UBERON:0000411,1.41e-08,10;UBERON:0001950,1.41e-08,10;UBERON:0010314,1.86e-08,92;UBERON:0004111,2.49e-08,122;UBERON:0003080,6.75e-08,40;UBERON:0002346,8.77e-08,64;UBERON:0003075,8.77e-08,64;UBERON:0007284,8.77e-08,64;UBERON:0010371,1.26e-07,73;UBERON:0002780,3.91e-07,39;UBERON:0001890,3.91e-07,39;UBERON:0006240,3.91e-07,39;UBERON:0003056,4.08e-07,49;UBERON:0000025,9.65e-07,114
|phase1_expression=1.12104192973356,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0,0.422366166455,0.936258105287974,0,0,0,0.262261207256992,0.333109761815663,0.404950534779652,0,0.315462165358238,0.137114433605739,0.42438965179803,1.44573593256819,0.297872853602656,0.522399578277871,0.639969691173627,0.22940928106717,0,0,0,0.760093677825496,0,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0,0,0.523523743973798,0.588231488031014,0,0,0.503587271902309,0.405507724878058,0.734187008646726,0.782391344348039,0.436050312760893,0.219686182734472,0.58328969722285,0.419959264876088,0,0,0,0,0.257259436035947,1.14613375975503,2.06268836910977,0,0,0,0,0,0,0,0,1.19840044207362,0,0,0,0,0.285650984403804,0.441737081903227,0,0.0958454710182364,0,6.60695285996332,3.31987079021488,3.84016333140609,0,0,0,2.51264699101243,2.25105044012672,2.59757021220577,0.294628585473668,0.569486723196412,0,0.227178579999552,0.604572480854284,1.15945795480671,0,0,0,0,0,1.40444420131752,0.170430322578058,0,0.35333957451034,0.281686839553361,0,0,0,0,0,0,1.1418387971906,0,2.52351636410202,0.346970653532272,0,0,0.452167921657868,0.587943535678524,2.13633205260448,0.247194967734374,3.90418263683761,1.76922110389975,1.61766849947409,0.883366073841574,0.969750506270444,3.72783522436244,4.68449275218475,5.02672096352292,0.510914110417183,0.359445373517761,0.599902730993408,0.381210681219194,5.54225365797844,7.32000964509802,0.502617408451458,1.73824320192276,2.81287003063364,4.98691306942944,4.54275536589721,0.916554274652847,1.99051152976149,1.76905930903572,2.94618598241064,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.612328492361951,0.640568601424249,0.187403449119458,6.98499100995342,0,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0,0.199034266818493,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0.180062061461015,0.473489471170421,0.196764231747404,0.154267112887378,0.697601834251224,0.268273401399619,0.583826711835847,0.987359099480883,0.985004784474571,2.26992666728396,2.77779976108131,1.09775057645525,3.08674763148855,2.10289948564127,0.205809224758569,0.330418782983798,0.528901133327089,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0,0,0.397912944082302,0.58489226135736,0,0.216138049874694,0.398282546508734,0.379335801906163,0.114248512609729,1.1270773567308,0.203651327845314,1.16371492300575,0.701358198903186,0.505892296994058,0.885660887877613,1.255989822731,1.97435462274881,0.889357881261447,0,0.196558995113203,0.224862112384854,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,0,0,0.624075346229121,0.252578877947112,0,0.482443521363367,1.84753190166605,0,0.162964976442026,0,0.469380496577004,0.167506257441816,1.6663054862021,1.56106918286239,0.315270288212382,0.664394068946325,0.318909537314974,2.45794972073607,1.20879487306127,0.723245292907558,0,0,0.491764273019036,2.20749397043786,4.49541651965817,4.21962071731931,0.163934945376675,2.52470927204373,0.315508219416257,0,0,0.716906393857656,0.222798674082394,0,0.404810701674894,0,1.97643888973262,2.89189184779626,1.41940085208269,0,0.977321756121456,2.3095817216155,1.32745138339963,0,0,0,0,0.614870295887855,0.258428293168221,1.09060118843252,0,1.58018378967908,3.16255825724996,1.03135543248187,3.40439605753788,0,0,0.643011105094777,0.709360934569094,1.60531935841864,1.15184314421485,0.608929898229199,0,0.63549621259146,2.20528398054962,0.8244312647074,1.29171541356724,0.361877549568935,0.596861720015682,0.656563598980245,1.1659233465194,4.26478194624172,0.341741761595705,0.412773735926445,0.185194527369712,0,0.136694227721025,0.228778173206523,1.35982743995084,1.39951452323658,1.38199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.436725127492355,0,0.578574190077352,0.26175594198403,0.777689839750757,3.72803587852155,2.81846469342095,0,0,0.388902376688095,0.129159823477731,0.168956125490778,0.234714477291508,0.39061315453185,0.943734099831398,1.93267296660805,1.15212002503146,0.316011120628178,0,0,0,0.358053391334963,0,0,0,0,0.15241361331,0,0.682205165178267,0,0.467507608726276,1.81384306892169,0.221985953374065,0.0897138566094757,0.335769232728157,1.54551675225752,0.563047426353546,0.183151624267265,0,0.501572104035363,2.25900737046827,2.30162618253588,1.71868654031819,0.515559547031063,2.05524755931193,3.7769694869485,5.40018000185445,2.70192721934532,3.17199686288943,2.07104124700728,0,0,0.341467211508268,0.243106717068294,0,0,0.44449345560323,0.412070114477788,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.187283014939765,0.448176066834085,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0,0.887379030796687,0.476872379894642,0.726732083161643,0.188218760830661,0.25384382367503,0.548783918618318,0.789209134313529,0,0.561142271657738,0.593175090620871,0.29551344712669,0.409231043169689,0,0.192906610981141,0,1.40358965067245,0.859484216193193,1.53030665655075,1.32354851471709,1.62307484934295
|short_description=p5@Klf9
}}

Revision as of 17:13, 13 September 2013

Short description:p5@Klf9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Klf9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -148bp_to_ENSMUST00000036884, NM_010638, uc008gzz.1_5end
EntrezGene:Klf9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Klf9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H13.90
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I25.03
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A45.54
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F10.50
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C24.50
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.52
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism2.92e-1251
brain4.75e-1147
future brain4.75e-1147
regional part of nervous system8.59e-1154
regional part of brain2.66e-1046
central nervous system2.66e-0973
neural tube2.83e-0952
neural rod2.83e-0952
future spinal cord2.83e-0952
neural keel2.83e-0952
ectoderm-derived structure6.74e-0995
ectoderm6.74e-0995
presumptive ectoderm6.74e-0995
nervous system8.53e-0975
occipital lobe1.41e-0810
visual cortex1.41e-0810
neocortex1.41e-0810
structure with developmental contribution from neural crest1.86e-0892
anatomical conduit2.49e-08122
anterior neural tube6.75e-0840
neurectoderm8.77e-0864
neural plate8.77e-0864
presumptive neural plate8.77e-0864
ecto-epithelium1.26e-0773
regional part of forebrain3.91e-0739
forebrain3.91e-0739
future forebrain3.91e-0739
pre-chordal neural plate4.08e-0749
tube9.65e-07114







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:23215554..23215567,%2B&oldid=2956196"