FFCP PHASE1:Mm9::chr18:16849044..16849057,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2232|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:16849044..16849057,-|id=chr18:16849044..16849057,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!4.16e-14!114;UBERON:0004111!5.36e-12!122;UBERON:0007100!8.00e-12!18;UBERON:0000948!8.00e-12!18;UBERON:0005498!8.00e-12!18;UBERON:0004140!8.00e-12!18;UBERON:0009881!8.00e-12!18;UBERON:0004141!8.00e-12!18;UBERON:0003084!8.00e-12!18;UBERON:0007005!8.00e-12!18;UBERON:0004139!8.00e-12!18;UBERON:0004291!8.00e-12!18;UBERON:0004535!5.80e-10!23;UBERON:0001009!5.80e-10!23;UBERON:0002346!1.72e-09!71;UBERON:0003075!1.72e-09!71;UBERON:0007284!1.72e-09!71;UBERON:0003914!1.47e-08!47;UBERON:0003056!1.32e-07!49;UBERON:0000468!3.43e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.02e-21,18;UBERON:0000948,4.02e-21,18;UBERON:0005498,4.02e-21,18;UBERON:0004140,4.02e-21,18;UBERON:0009881,4.02e-21,18;UBERON:0004141,4.02e-21,18;UBERON:0003084,4.02e-21,18;UBERON:0007005,4.02e-21,18;UBERON:0004139,4.02e-21,18;UBERON:0004291,4.02e-21,18;UBERON:0010314,5.04e-16,92;UBERON:0004535,9.44e-16,23;UBERON:0001009,9.44e-16,23;UBERON:0003914,7.65e-11,47;UBERON:0004872,6.29e-10,33;UBERON:0000025,7.26e-09,114;UBERON:0003103,6.80e-08,43;UBERON:0004111,7.83e-08,122;UBERON:0002021,2.87e-07,10;UBERON:0000411,2.87e-07,10;UBERON:0001950,2.87e-07,10;UBERON:0000483,5.50e-07,174;UBERON:0000119,8.16e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.734187008646726,0,0,0.219686182734472,0,0,0,0,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0,0,0.441737081903227,0,0.383381884072945,0,1.10115880999389,0.510749352340751,0.307213066512487,0.263772575460388,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.45839474333043,1.17851434189467,0.854230084794618,0.559198337475902,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,1.94932925234301,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,1.04091196059682,0.608930956624282,0,0.150722640552623,0.705532242814229,0,0,0.144599356919912,0,0.647067399789637,0.883366073841574,2.42437626567611,0,0.292780797011547,0.83778682725382,0,0,0,0,1.64769703345305,0.915001205637253,0.879580464790051,0.521472960576829,0.511430914660661,0.62336413367868,0.324482526135515,0.101839363850316,0.248813941220186,0,0.210441855886474,0.390361328888111,0,0.720248519221397,1.50704817835715,2.31324097114515,3.07472928683639,1.3118241438362,0.517406741478031,0,0,0.879755620819744,0,0.834141747676794,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,1.86413195281952,1.40715635988658,1.80062061461015,1.89395788468168,3.93528463494808,4.16521204795921,3.95307706075693,2.14618721119695,4.43708300995244,4.11399624783701,2.79084688934462,0.56748166682099,1.31579988682799,2.63460138349261,0.671032093801859,1.05144974282064,0.617427674275707,0,0,0.426576501070468,0.464473343720877,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0.898819408654221,0,0,0,0.456994050438915,0,0.407302655690628,0.581857461502877,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0,0,0,0.25462585178142,0.575392274901621,0.972811360650212,0,10.0637744569148,0.372140947668503,1.24815069245824,0.505157755894224,0.896987067609561,2.41221760681684,0,0.189491411770485,0.325929952884052,0.339490171550376,0.704070744865506,0.502518772325447,0.238043640886014,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0.345369963731791,0,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0,0,0.94652465824877,1.56175497718655,1.29254038639679,0.716906393857656,0.445597348164788,0.283076530788832,0.809621403349789,1.75353514746787,1.58115111178609,0,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,1.44048875225048,0,0.428674070063185,0.354680467284547,0.178368817602071,1.31639216481697,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.58678619322877,0.651021924219751,0.734015410979976,0.724752362478018,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,2.25900737046827,0.920650473014354,1.71868654031819,2.57779773515531,0.685082519770642,0,2.02506750069542,1.80128481289688,1.81256963593682,0.51776031175182,0.415149390336707,0,1.19513524027894,0.486213434136588,0,0.183843508450014,0.4444934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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2232 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:16849044..16849057,- | |||
|id=chr18:16849044..16849057,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!4.16e-14!114;UBERON:0004111!5.36e-12!122;UBERON:0007100!8.00e-12!18;UBERON:0000948!8.00e-12!18;UBERON:0005498!8.00e-12!18;UBERON:0004140!8.00e-12!18;UBERON:0009881!8.00e-12!18;UBERON:0004141!8.00e-12!18;UBERON:0003084!8.00e-12!18;UBERON:0007005!8.00e-12!18;UBERON:0004139!8.00e-12!18;UBERON:0004291!8.00e-12!18;UBERON:0004535!5.80e-10!23;UBERON:0001009!5.80e-10!23;UBERON:0002346!1.72e-09!71;UBERON:0003075!1.72e-09!71;UBERON:0007284!1.72e-09!71;UBERON:0003914!1.47e-08!47;UBERON:0003056!1.32e-07!49;UBERON:0000468!3.43e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,4.02e-21,18;UBERON:0000948,4.02e-21,18;UBERON:0005498,4.02e-21,18;UBERON:0004140,4.02e-21,18;UBERON:0009881,4.02e-21,18;UBERON:0004141,4.02e-21,18;UBERON:0003084,4.02e-21,18;UBERON:0007005,4.02e-21,18;UBERON:0004139,4.02e-21,18;UBERON:0004291,4.02e-21,18;UBERON:0010314,5.04e-16,92;UBERON:0004535,9.44e-16,23;UBERON:0001009,9.44e-16,23;UBERON:0003914,7.65e-11,47;UBERON:0004872,6.29e-10,33;UBERON:0000025,7.26e-09,114;UBERON:0003103,6.80e-08,43;UBERON:0004111,7.83e-08,122;UBERON:0002021,2.87e-07,10;UBERON:0000411,2.87e-07,10;UBERON:0001950,2.87e-07,10;UBERON:0000483,5.50e-07,174;UBERON:0000119,8.16e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.734187008646726,0,0,0.219686182734472,0,0,0,0,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0.622137673850866,0.405017814995072,0,0,0.441737081903227,0,0.383381884072945,0,1.10115880999389,0.510749352340751,0.307213066512487,0.263772575460388,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.45839474333043,1.17851434189467,0.854230084794618,0.559198337475902,0.075726193333184,0.151143120213571,0,0,0,0.539703191637817,1.94932925234301,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,1.04091196059682,0.608930956624282,0,0.150722640552623,0.705532242814229,0,0,0.144599356919912,0,0.647067399789637,0.883366073841574,2.42437626567611,0,0.292780797011547,0.83778682725382,0,0,0,0,1.64769703345305,0.915001205637253,0.879580464790051,0.521472960576829,0.511430914660661,0.62336413367868,0.324482526135515,0.101839363850316,0.248813941220186,0,0.210441855886474,0.390361328888111,0,0.720248519221397,1.50704817835715,2.31324097114515,3.07472928683639,1.3118241438362,0.517406741478031,0,0,0.879755620819744,0,0.834141747676794,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,1.86413195281952,1.40715635988658,1.80062061461015,1.89395788468168,3.93528463494808,4.16521204795921,3.95307706075693,2.14618721119695,4.43708300995244,4.11399624783701,2.79084688934462,0.56748166682099,1.31579988682799,2.63460138349261,0.671032093801859,1.05144974282064,0.617427674275707,0,0,0.426576501070468,0.464473343720877,0.38660238396628,0.201683524623343,0,0.190225626112559,0,0.329397909448022,0,0,0.19496408711912,0.898819408654221,0,0,0,0.456994050438915,0,0.407302655690628,0.581857461502877,0.210407459670956,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0,0,0,0.25462585178142,0.575392274901621,0.972811360650212,0,10.0637744569148,0.372140947668503,1.24815069245824,0.505157755894224,0.896987067609561,2.41221760681684,0,0.189491411770485,0.325929952884052,0.339490171550376,0.704070744865506,0.502518772325447,0.238043640886014,0,0.315270288212382,0.44292937929755,0.159454768657487,0,0.345369963731791,0,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0,0,0.94652465824877,1.56175497718655,1.29254038639679,0.716906393857656,0.445597348164788,0.283076530788832,0.809621403349789,1.75353514746787,1.58115111178609,0,0.283880170416537,0,0,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,1.44048875225048,0,0.428674070063185,0.354680467284547,0.178368817602071,1.31639216481697,0,0.23467170806371,0,0,0,0,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.540026704109006,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.58678619322877,0.651021924219751,0.734015410979976,0.724752362478018,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,2.25900737046827,0.920650473014354,1.71868654031819,2.57779773515531,0.685082519770642,0,2.02506750069542,1.80128481289688,1.81256963593682,0.51776031175182,0.415149390336707,0,1.19513524027894,0.486213434136588,0,0.183843508450014,0.44449345560323,0.412070114477788,0,0.758091635291392,1.2673964994512,0.565879024158229,0.280924522409647,0.320125762024346,0.402048282689293,0,0.347652977834566,0.578727661391115,0.412085900803307,0.294397840268795,1.37147700954166,0.70990322463735,0.715308569841963,0.581385666529314,0.282328141245992,0.676916863133412,0.548783918618318,1.57841826862706,0.543216455383447,0,0.593175090620871,0.29551344712669,0.409231043169689,0.309873682371932,0.771626443924566,1.24905288968973,0.935726433781634,0.644613162144895,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr18:16849044..16849057,- | |||
}} |
Revision as of 15:45, 13 September 2013
Short description: | p@chr18:16849044..16849057, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:16849044..16849057, - |
Coexpression cluster: | MCL_coexpression_mm9:2232 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 4.02e-21 | 18 |
heart | 4.02e-21 | 18 |
primitive heart tube | 4.02e-21 | 18 |
primary heart field | 4.02e-21 | 18 |
anterior lateral plate mesoderm | 4.02e-21 | 18 |
heart tube | 4.02e-21 | 18 |
heart primordium | 4.02e-21 | 18 |
cardiac mesoderm | 4.02e-21 | 18 |
cardiogenic plate | 4.02e-21 | 18 |
heart rudiment | 4.02e-21 | 18 |
structure with developmental contribution from neural crest | 5.04e-16 | 92 |
cardiovascular system | 9.44e-16 | 23 |
circulatory system | 9.44e-16 | 23 |
epithelial tube | 7.65e-11 | 47 |
splanchnic layer of lateral plate mesoderm | 6.29e-10 | 33 |
tube | 7.26e-09 | 114 |
compound organ | 6.80e-08 | 43 |
anatomical conduit | 7.83e-08 | 122 |
occipital lobe | 2.87e-07 | 10 |
visual cortex | 2.87e-07 | 10 |
neocortex | 2.87e-07 | 10 |
epithelium | 5.50e-07 | 174 |
cell layer | 8.16e-07 | 176 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.