FFCP PHASE1:Mm9::chr1:140055650..140055662,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:140055650..140055662,-|id=chr1:140055650..140055662,-|ontology_enrichment_celltype=CL:0000988!9.28e-22!32;CL:0002032!9.28e-22!32;CL:0000037!9.28e-22!32;CL:0000566!9.28e-22!32;CL:0000837!9.28e-22!32;CL:0000838!1.58e-21!12;CL:0000791!5.22e-20!9;CL:0000789!5.22e-20!9;CL:0002420!5.22e-20!9;CL:0002419!5.22e-20!9;CL:0000790!5.22e-20!9;CL:0000542!1.12e-19!13;CL:0000051!1.12e-19!13;CL:0000084!1.28e-19!11;CL:0000827!1.28e-19!11;CL:0000624!7.22e-18!8;CL:0000738!1.88e-14!17;CL:0002087!1.88e-14!17;CL:0000893!4.06e-14!6;CL:0002489!4.06e-14!6;CL:0000898!4.06e-14!6;CL:0000809!4.06e-14!6;CL:0000810!4.06e-14!6;CL:0000895!4.06e-14!6;CL:0000808!4.06e-14!6;CL:0000894!4.06e-14!6;CL:0000806!4.06e-14!6;CL:0000807!4.06e-14!6;CL:0000805!4.06e-14!6;CL:0002425!4.06e-14!6;CL:0002436!4.06e-14!6;CL:0002427!4.06e-14!6;CL:0002428!4.06e-14!6;CL:0002429!4.06e-14!6;CL:0002433!4.06e-14!6;CL:0002431!4.06e-14!6;CL:0002432!4.06e-14!6;CL:0002320!1.13e-13!46;CL:0000134!1.13e-13!46;CL:0002031!8.49e-13!25;CL:0000219!5.93e-11!54;CL:0000063!3.91e-08!66;CL:0000723!3.31e-07!91;CL:0000048!3.31e-07!91|ontology_enrichment_celltype_v019_2=CL:0000791,1.65e-17,9;CL:0000789,1.65e-17,9;CL:0002420,1.65e-17,9;CL:0002419,1.65e-17,9;CL:0000790,1.65e-17,9;CL:0000893,3.37e-17,6;CL:0002489,3.37e-17,6;CL:0000898,3.37e-17,6;CL:0000809,3.37e-17,6;CL:0000810,3.37e-17,6;CL:0000895,3.37e-17,6;CL:0000808,3.37e-17,6;CL:0000894,3.37e-17,6;CL:0000806,3.37e-17,6;CL:0000807,3.37e-17,6;CL:0000805,3.37e-17,6;CL:0002425,3.37e-17,6;CL:0002436,3.37e-17,6;CL:0002427,3.37e-17,6;CL:0002428,3.37e-17,6;CL:0002429,3.37e-17,6;CL:0002433,3.37e-17,6;CL:0002431,3.37e-17,6;CL:0002432,3.37e-17,6;CL:0000084,2.49e-14,11;CL:0000827,2.49e-14,11;CL:0000838,3.90e-13,12;CL:0000624,5.65e-13,8;CL:0000542,4.01e-12,13;CL:0000051,4.01e-12,13;CL:0000988,1.15e-11,32;CL:0002032,1.15e-11,32;CL:0000037,1.15e-11,32;CL:0000837,1.15e-11,32;CL:0000738,2.93e-09,17;CL:0002087,2.93e-09,17;CL:0000557,2.51e-08,7;CL:0002320,7.03e-08,46;CL:0000134,7.03e-08,46;CL:0000625,1.78e-07,1;CL:0000723,4.33e-07,91;CL:0000048,4.33e-07,91;CL:0000355,5.18e-07,9|ontology_enrichment_disease=DOID:0060100!2.81e-08!3;DOID:4045!2.81e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,6.21e-20,3;DOID:4045,6.21e-20,3;DOID:0050686,2.88e-10,6|ontology_enrichment_uberon=UBERON:0002193!1.89e-18!48;UBERON:0002390!3.94e-18!45;UBERON:0003061!3.94e-18!45;UBERON:0004177!2.95e-17!29;UBERON:0002384!1.13e-13!46;UBERON:0002370!3.03e-13!23;UBERON:0000974!3.03e-13!23;UBERON:0004807!3.03e-13!23;UBERON:0005058!3.03e-13!23;UBERON:0003351!3.03e-13!23;UBERON:0009113!3.03e-13!23;UBERON:0003295!3.03e-13!23;UBERON:0009722!3.03e-13!23;UBERON:0005562!3.03e-13!23;UBERON:0007690!3.03e-13!23;UBERON:0006562!1.43e-12!24;UBERON:0003408!1.43e-12!24;UBERON:0001557!1.43e-12!24;UBERON:0001042!1.43e-12!24;UBERON:0008814!1.43e-12!24;UBERON:0009145!1.43e-12!24;UBERON:0002405!6.41e-11!70;UBERON:0000072!7.54e-11!27;UBERON:0000065!1.26e-09!41;UBERON:0001004!2.60e-09!42;UBERON:0000063!4.63e-09!35;UBERON:0005057!4.03e-08!51;UBERON:0003081!1.32e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.03e-08,46;UBERON:0001134,5.18e-07,9;UBERON:0002036,5.18e-07,9;UBERON:0002385,5.18e-07,9;UBERON:0000486,5.18e-07,9;UBERON:0007503,5.18e-07,9;UBERON:0001015,5.18e-07,9;UBERON:0002329,5.18e-07,9;UBERON:0003082,5.18e-07,9;UBERON:0003059,5.18e-07,9;UBERON:0007282,5.18e-07,9;UBERON:0004290,5.18e-07,9;UBERON:0009618,5.18e-07,9|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,13.093351160105,5.38348410540585,3.08192342805909,1.67521533890206,0.684802919724823,0.262261207256992,0.333109761815663,0,0,0.315462165358238,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,7.0320181007142,4.71171369576418,145.881409031692,10.2456822743767,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0.201932899896295,0,0.302478555410522,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:140055650..140055662,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:140055650..140055662,- | |||
|id=chr1:140055650..140055662,- | |||
|ontology_enrichment_celltype=CL:0000988!9.28e-22!32;CL:0002032!9.28e-22!32;CL:0000037!9.28e-22!32;CL:0000566!9.28e-22!32;CL:0000837!9.28e-22!32;CL:0000838!1.58e-21!12;CL:0000791!5.22e-20!9;CL:0000789!5.22e-20!9;CL:0002420!5.22e-20!9;CL:0002419!5.22e-20!9;CL:0000790!5.22e-20!9;CL:0000542!1.12e-19!13;CL:0000051!1.12e-19!13;CL:0000084!1.28e-19!11;CL:0000827!1.28e-19!11;CL:0000624!7.22e-18!8;CL:0000738!1.88e-14!17;CL:0002087!1.88e-14!17;CL:0000893!4.06e-14!6;CL:0002489!4.06e-14!6;CL:0000898!4.06e-14!6;CL:0000809!4.06e-14!6;CL:0000810!4.06e-14!6;CL:0000895!4.06e-14!6;CL:0000808!4.06e-14!6;CL:0000894!4.06e-14!6;CL:0000806!4.06e-14!6;CL:0000807!4.06e-14!6;CL:0000805!4.06e-14!6;CL:0002425!4.06e-14!6;CL:0002436!4.06e-14!6;CL:0002427!4.06e-14!6;CL:0002428!4.06e-14!6;CL:0002429!4.06e-14!6;CL:0002433!4.06e-14!6;CL:0002431!4.06e-14!6;CL:0002432!4.06e-14!6;CL:0002320!1.13e-13!46;CL:0000134!1.13e-13!46;CL:0002031!8.49e-13!25;CL:0000219!5.93e-11!54;CL:0000063!3.91e-08!66;CL:0000723!3.31e-07!91;CL:0000048!3.31e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.65e-17,9;CL:0000789,1.65e-17,9;CL:0002420,1.65e-17,9;CL:0002419,1.65e-17,9;CL:0000790,1.65e-17,9;CL:0000893,3.37e-17,6;CL:0002489,3.37e-17,6;CL:0000898,3.37e-17,6;CL:0000809,3.37e-17,6;CL:0000810,3.37e-17,6;CL:0000895,3.37e-17,6;CL:0000808,3.37e-17,6;CL:0000894,3.37e-17,6;CL:0000806,3.37e-17,6;CL:0000807,3.37e-17,6;CL:0000805,3.37e-17,6;CL:0002425,3.37e-17,6;CL:0002436,3.37e-17,6;CL:0002427,3.37e-17,6;CL:0002428,3.37e-17,6;CL:0002429,3.37e-17,6;CL:0002433,3.37e-17,6;CL:0002431,3.37e-17,6;CL:0002432,3.37e-17,6;CL:0000084,2.49e-14,11;CL:0000827,2.49e-14,11;CL:0000838,3.90e-13,12;CL:0000624,5.65e-13,8;CL:0000542,4.01e-12,13;CL:0000051,4.01e-12,13;CL:0000988,1.15e-11,32;CL:0002032,1.15e-11,32;CL:0000037,1.15e-11,32;CL:0000837,1.15e-11,32;CL:0000738,2.93e-09,17;CL:0002087,2.93e-09,17;CL:0000557,2.51e-08,7;CL:0002320,7.03e-08,46;CL:0000134,7.03e-08,46;CL:0000625,1.78e-07,1;CL:0000723,4.33e-07,91;CL:0000048,4.33e-07,91;CL:0000355,5.18e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.81e-08!3;DOID:4045!2.81e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.21e-20,3;DOID:4045,6.21e-20,3;DOID:0050686,2.88e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.89e-18!48;UBERON:0002390!3.94e-18!45;UBERON:0003061!3.94e-18!45;UBERON:0004177!2.95e-17!29;UBERON:0002384!1.13e-13!46;UBERON:0002370!3.03e-13!23;UBERON:0000974!3.03e-13!23;UBERON:0004807!3.03e-13!23;UBERON:0005058!3.03e-13!23;UBERON:0003351!3.03e-13!23;UBERON:0009113!3.03e-13!23;UBERON:0003295!3.03e-13!23;UBERON:0009722!3.03e-13!23;UBERON:0005562!3.03e-13!23;UBERON:0007690!3.03e-13!23;UBERON:0006562!1.43e-12!24;UBERON:0003408!1.43e-12!24;UBERON:0001557!1.43e-12!24;UBERON:0001042!1.43e-12!24;UBERON:0008814!1.43e-12!24;UBERON:0009145!1.43e-12!24;UBERON:0002405!6.41e-11!70;UBERON:0000072!7.54e-11!27;UBERON:0000065!1.26e-09!41;UBERON:0001004!2.60e-09!42;UBERON:0000063!4.63e-09!35;UBERON:0005057!4.03e-08!51;UBERON:0003081!1.32e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.03e-08,46;UBERON:0001134,5.18e-07,9;UBERON:0002036,5.18e-07,9;UBERON:0002385,5.18e-07,9;UBERON:0000486,5.18e-07,9;UBERON:0007503,5.18e-07,9;UBERON:0001015,5.18e-07,9;UBERON:0002329,5.18e-07,9;UBERON:0003082,5.18e-07,9;UBERON:0003059,5.18e-07,9;UBERON:0007282,5.18e-07,9;UBERON:0004290,5.18e-07,9;UBERON:0009618,5.18e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,13.093351160105,5.38348410540585,3.08192342805909,1.67521533890206,0.684802919724823,0.262261207256992,0.333109761815663,0,0,0.315462165358238,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.78916424547506,7.0320181007142,4.71171369576418,145.881409031692,10.2456822743767,5.34061388334269,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,2.68875039313971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0.201932899896295,0,0.302478555410522,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:140055650..140055662,- | |||
}} |
Revision as of 19:07, 13 September 2013
Short description: | p@chr1:140055650..140055662, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:140055650..140055662, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.03e-08 | 46 |
skeletal muscle tissue | 5.18e-07 | 9 |
striated muscle tissue | 5.18e-07 | 9 |
muscle tissue | 5.18e-07 | 9 |
multilaminar epithelium | 5.18e-07 | 9 |
epithelial vesicle | 5.18e-07 | 9 |
musculature | 5.18e-07 | 9 |
somite | 5.18e-07 | 9 |
myotome | 5.18e-07 | 9 |
presomitic mesoderm | 5.18e-07 | 9 |
presumptive segmental plate | 5.18e-07 | 9 |
dermomyotome | 5.18e-07 | 9 |
trunk paraxial mesoderm | 5.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.21e-20 | 3 |
muscle cancer | 6.21e-20 | 3 |
organ system cancer | 2.88e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.