FFCP PHASE1:Mm9::chrX:133372057..133372068,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=212|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:133372057..133372068,+|id=chrX:133372057..133372068,+|ontology_enrichment_celltype=CL:0000540!3.43e-08!33;CL:0000047!3.43e-08!33;CL:0000031!3.43e-08!33;CL:0000404!3.43e-08!33;CL:0000221!6.91e-07!44;CL:0000133!6.91e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,2.30e-10,33;CL:0000047,2.30e-10,33;CL:0000031,2.30e-10,33;CL:0000404,2.30e-10,33;CL:0002610,1.32e-08,3;CL:0002319,1.95e-08,43;CL:0000393,2.60e-08,39;CL:0000211,2.60e-08,39;CL:0000221,3.58e-08,44;CL:0000133,3.58e-08,44;CL:0002614,7.33e-08,3;CL:0000117,7.79e-07,23;CL:0000337,7.79e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.61e-21!75;UBERON:0001016!7.61e-21!75;UBERON:0001017!2.32e-19!73;UBERON:0005743!2.32e-19!73;UBERON:0004121!1.69e-18!102;UBERON:0000924!1.69e-18!102;UBERON:0006601!1.69e-18!102;UBERON:0000033!7.69e-14!63;UBERON:0000955!9.23e-14!50;UBERON:0006238!9.23e-14!50;UBERON:0001049!1.17e-13!52;UBERON:0005068!1.17e-13!52;UBERON:0006241!1.17e-13!52;UBERON:0007135!1.17e-13!52;UBERON:0002346!2.12e-13!71;UBERON:0003075!2.12e-13!71;UBERON:0007284!2.12e-13!71;UBERON:0002616!4.97e-13!49;UBERON:0002021!9.08e-12!10;UBERON:0000411!9.08e-12!10;UBERON:0001950!9.08e-12!10;UBERON:0002020!4.90e-11!34;UBERON:0002791!8.60e-09!29;UBERON:0003528!8.60e-09!29;UBERON:0001893!8.60e-09!29;UBERON:0003056!1.70e-08!49;UBERON:0003080!1.82e-08!40;UBERON:0007811!4.50e-08!86;UBERON:0000010!7.58e-08!11;UBERON:0002780!8.48e-08!39;UBERON:0001890!8.48e-08!39;UBERON:0006240!8.48e-08!39;UBERON:0002298!1.25e-07!6;UBERON:0000153!4.98e-07!94;UBERON:0002619!6.86e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.72e-36,75;UBERON:0001017,1.66e-35,73;UBERON:0000073,7.29e-32,54;UBERON:0004121,3.88e-29,95;UBERON:0000924,3.88e-29,95;UBERON:0006601,3.88e-29,95;UBERON:0001049,4.26e-28,52;UBERON:0005068,4.26e-28,52;UBERON:0006241,4.26e-28,52;UBERON:0007135,4.26e-28,52;UBERON:0002346,2.10e-25,64;UBERON:0003075,2.10e-25,64;UBERON:0007284,2.10e-25,64;UBERON:0000955,1.63e-24,47;UBERON:0006238,1.63e-24,47;UBERON:0002021,2.01e-23,10;UBERON:0000411,2.01e-23,10;UBERON:0001950,2.01e-23,10;UBERON:0002616,5.40e-23,46;UBERON:0010371,1.88e-21,73;UBERON:0002020,5.37e-21,34;UBERON:0003528,6.09e-18,29;UBERON:0002791,6.09e-18,29;UBERON:0001893,6.09e-18,29;UBERON:0003080,1.04e-17,40;UBERON:0002780,3.15e-16,39;UBERON:0001890,3.15e-16,39;UBERON:0006240,3.15e-16,39;UBERON:0010314,1.20e-15,92;UBERON:0002619,1.50e-15,17;UBERON:0003056,2.59e-15,49;UBERON:0000956,2.31e-14,21;UBERON:0001869,2.31e-14,21;UBERON:0000203,2.31e-14,21;UBERON:0003076,2.16e-11,12;UBERON:0003057,2.16e-11,12;UBERON:0002950,7.21e-10,4;UBERON:0001891,7.21e-10,4;UBERON:0009616,7.21e-10,4;UBERON:0010286,7.21e-10,4;UBERON:0011216,1.87e-09,194;UBERON:0000025,2.16e-09,114;UBERON:0004684,1.32e-08,3;UBERON:0002275,1.32e-08,3;UBERON:0004111,2.26e-08,122;UBERON:0002038,7.33e-08,3;UBERON:0009663,7.33e-08,3;UBERON:0009661,7.33e-08,3;UBERON:0000125,7.33e-08,3;UBERON:0002308,7.33e-08,3;UBERON:0004733,9.50e-07,6;UBERON:0004732,9.50e-07,6;UBERON:0002028,9.50e-07,6;UBERON:0007277,9.50e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99911378165325,1.54607978666129,0,0,0,17.6185409599022,24.515968912356,27.6491759861238,0,0.182975287204819,0,8.09630697104005,4.50210088025344,23.0725354142983,2.35702868378934,0.711858403995515,0,0.605809546665472,1.81371744256285,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0.484875253135222,0,3.80615036115011,7.12118803165747,0,0,0,0,6.29120685500255,5.94750783664214,0.125654352112864,2.60736480288415,9.46147192122223,9.3504620051802,23.8494656709604,0,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,7.76110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,4.6263788684108,0,0.330418782983798,0.264450566663544,0,0.464473343720877,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,14.7706542788769,42.3134188597853,0,0,0,0.390438744296638,1.07711698866399,0.238968797952552,1.33679204449436,2.54768877709949,0.809621403349789,2.04579100537918,1.18586333383957,2.89189184779626,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.161464426695906,0,0,0,0,25.5886916774503,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506868376472335,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,36.1441179274923,19.7939851698086,29.7905666988486,9.10821866421544,11.6464028361009,24.9279986138601,10.1253375034771,4.95353323546643,4.07828168085784,6.21312374102184,0,0,0,0,0.209613162627982,0,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chrX:133372057..133372068,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=212 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:133372057..133372068,+ | |||
|id=chrX:133372057..133372068,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.43e-08!33;CL:0000047!3.43e-08!33;CL:0000031!3.43e-08!33;CL:0000404!3.43e-08!33;CL:0000221!6.91e-07!44;CL:0000133!6.91e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.30e-10,33;CL:0000047,2.30e-10,33;CL:0000031,2.30e-10,33;CL:0000404,2.30e-10,33;CL:0002610,1.32e-08,3;CL:0002319,1.95e-08,43;CL:0000393,2.60e-08,39;CL:0000211,2.60e-08,39;CL:0000221,3.58e-08,44;CL:0000133,3.58e-08,44;CL:0002614,7.33e-08,3;CL:0000117,7.79e-07,23;CL:0000337,7.79e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.61e-21!75;UBERON:0001016!7.61e-21!75;UBERON:0001017!2.32e-19!73;UBERON:0005743!2.32e-19!73;UBERON:0004121!1.69e-18!102;UBERON:0000924!1.69e-18!102;UBERON:0006601!1.69e-18!102;UBERON:0000033!7.69e-14!63;UBERON:0000955!9.23e-14!50;UBERON:0006238!9.23e-14!50;UBERON:0001049!1.17e-13!52;UBERON:0005068!1.17e-13!52;UBERON:0006241!1.17e-13!52;UBERON:0007135!1.17e-13!52;UBERON:0002346!2.12e-13!71;UBERON:0003075!2.12e-13!71;UBERON:0007284!2.12e-13!71;UBERON:0002616!4.97e-13!49;UBERON:0002021!9.08e-12!10;UBERON:0000411!9.08e-12!10;UBERON:0001950!9.08e-12!10;UBERON:0002020!4.90e-11!34;UBERON:0002791!8.60e-09!29;UBERON:0003528!8.60e-09!29;UBERON:0001893!8.60e-09!29;UBERON:0003056!1.70e-08!49;UBERON:0003080!1.82e-08!40;UBERON:0007811!4.50e-08!86;UBERON:0000010!7.58e-08!11;UBERON:0002780!8.48e-08!39;UBERON:0001890!8.48e-08!39;UBERON:0006240!8.48e-08!39;UBERON:0002298!1.25e-07!6;UBERON:0000153!4.98e-07!94;UBERON:0002619!6.86e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.72e-36,75;UBERON:0001017,1.66e-35,73;UBERON:0000073,7.29e-32,54;UBERON:0004121,3.88e-29,95;UBERON:0000924,3.88e-29,95;UBERON:0006601,3.88e-29,95;UBERON:0001049,4.26e-28,52;UBERON:0005068,4.26e-28,52;UBERON:0006241,4.26e-28,52;UBERON:0007135,4.26e-28,52;UBERON:0002346,2.10e-25,64;UBERON:0003075,2.10e-25,64;UBERON:0007284,2.10e-25,64;UBERON:0000955,1.63e-24,47;UBERON:0006238,1.63e-24,47;UBERON:0002021,2.01e-23,10;UBERON:0000411,2.01e-23,10;UBERON:0001950,2.01e-23,10;UBERON:0002616,5.40e-23,46;UBERON:0010371,1.88e-21,73;UBERON:0002020,5.37e-21,34;UBERON:0003528,6.09e-18,29;UBERON:0002791,6.09e-18,29;UBERON:0001893,6.09e-18,29;UBERON:0003080,1.04e-17,40;UBERON:0002780,3.15e-16,39;UBERON:0001890,3.15e-16,39;UBERON:0006240,3.15e-16,39;UBERON:0010314,1.20e-15,92;UBERON:0002619,1.50e-15,17;UBERON:0003056,2.59e-15,49;UBERON:0000956,2.31e-14,21;UBERON:0001869,2.31e-14,21;UBERON:0000203,2.31e-14,21;UBERON:0003076,2.16e-11,12;UBERON:0003057,2.16e-11,12;UBERON:0002950,7.21e-10,4;UBERON:0001891,7.21e-10,4;UBERON:0009616,7.21e-10,4;UBERON:0010286,7.21e-10,4;UBERON:0011216,1.87e-09,194;UBERON:0000025,2.16e-09,114;UBERON:0004684,1.32e-08,3;UBERON:0002275,1.32e-08,3;UBERON:0004111,2.26e-08,122;UBERON:0002038,7.33e-08,3;UBERON:0009663,7.33e-08,3;UBERON:0009661,7.33e-08,3;UBERON:0000125,7.33e-08,3;UBERON:0002308,7.33e-08,3;UBERON:0004733,9.50e-07,6;UBERON:0004732,9.50e-07,6;UBERON:0002028,9.50e-07,6;UBERON:0007277,9.50e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99911378165325,1.54607978666129,0,0,0,17.6185409599022,24.515968912356,27.6491759861238,0,0.182975287204819,0,8.09630697104005,4.50210088025344,23.0725354142983,2.35702868378934,0.711858403995515,0,0.605809546665472,1.81371744256285,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0.352766121407114,0,0,0,0,0,0,0.484875253135222,0,3.80615036115011,7.12118803165747,0,0,0,0,6.29120685500255,5.94750783664214,0.125654352112864,2.60736480288415,9.46147192122223,9.3504620051802,23.8494656709604,0,0,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0,0,0,7.76110112217047,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,4.6263788684108,0,0.330418782983798,0.264450566663544,0,0.464473343720877,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,14.7706542788769,42.3134188597853,0,0,0,0.390438744296638,1.07711698866399,0.238968797952552,1.33679204449436,2.54768877709949,0.809621403349789,2.04579100537918,1.18586333383957,2.89189184779626,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.8244312647074,0.161464426695906,0,0,0,0,25.5886916774503,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506868376472335,0,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,36.1441179274923,19.7939851698086,29.7905666988486,9.10821866421544,11.6464028361009,24.9279986138601,10.1253375034771,4.95353323546643,4.07828168085784,6.21312374102184,0,0,0,0,0.209613162627982,0,0,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.145346416632329,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:133372057..133372068,+ | |||
}} |
Revision as of 19:21, 14 September 2013
Short description: | p@chrX:133372057..133372068, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:133372057..133372068, + |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.30e-10 | 33 |
neuronal stem cell | 2.30e-10 | 33 |
neuroblast | 2.30e-10 | 33 |
electrically signaling cell | 2.30e-10 | 33 |
raphe nuclei neuron | 1.32e-08 | 3 |
neural cell | 1.95e-08 | 43 |
electrically responsive cell | 2.60e-08 | 39 |
electrically active cell | 2.60e-08 | 39 |
ectodermal cell | 3.58e-08 | 44 |
neurectodermal cell | 3.58e-08 | 44 |
neuron of the substantia nigra | 7.33e-08 | 3 |
CNS neuron (sensu Vertebrata) | 7.79e-07 | 23 |
neuroblast (sensu Vertebrata) | 7.79e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.