Personal tools

FFCP PHASE1:Mm9::chr17:87506961..87507024,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=56468|HGNC=|MCL_coexpression_id=230|UniProt=O54928|association_with_transcript=0bp_to_ENSMUST00000041369,NM_019654,uc008dup.1,uc008duq.1_5end|description=CAGE_peak_1_at_Socs5_5end|id=chr17:87506961..87507024,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!2.27e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.21e-07,11|phase1_expression=4.48416771893423,0,0,0.30246421130683,0.500895729946347,0.16787927191189,1.63528848416868,7.618276083053,4.08287294239834,13.3416780003536,3.93801326918661,4.54701306273417,1.71200729931206,2.62261207256992,2.6648780945253,2.02475267389826,1.39912375625629,7.25562980323947,7.26706498110415,6.79023442876848,3.82694805679814,4.76596565764249,2.87319768052829,0.159992422793407,0.91763712426868,0.57423196411502,0.430761996159075,0,0.190023419456374,0.756090389279792,0,3.17515336729816,0,0,0.288851619751275,0.831173226792462,0.816677425049476,0,0,0,0,0,0.485510353031154,67.4806944349094,88.5020609546362,91.4062825765174,2.34717403304412,1.96222640742402,3.29529274101708,1.74986909166855,3.77963338388479,4.31257693094915,8.22134769682908,4.35217285206807,4.7053131879945,18.2654199585522,8.02293631828519,12.3761302146586,4.04632921719196,2.11596391708813,2.53532561402472,7.79342423759004,3.55717918444456,4.49949858640699,3.9554654502679,3.5524005747305,1.79760066311043,2.68952813725088,2.07379224616955,1.89008313664367,1.68259969081106,3.42781181284564,2.20868540951614,1.10241719293459,0.958454710182364,3.67687514644008,5.50579404996943,4.08599481872601,4.91540906419979,2.2420668914133,3.20206752608434,1.56274011167028,3.62937898701795,3.37657566019008,4.5839474333043,5.59794312399969,5.41012387036591,5.40558392893372,30.6691082999395,8.99301565270748,10.4351215932604,3.44169550792555,0.679971333707751,0,0.649776417447669,1.79210754838934,1.82577746171277,7.6693645160126,8.83272415649754,12.7202246823722,6.90132756905734,8.98285341900225,17.8363667794652,0,1.73192832808971,1.77351905832569,2.02209778005913,1.82694207550496,3.6251303710604,11.7269289861212,11.7970022200972,8.22056791442781,8.76338889573022,9.04335843315735,7.99603208522793,15.2056575508907,1.23597483867187,2.74738778147832,0.884610551949874,3.88240439873782,3.97514733228708,3.87900202508178,0,2.92780797011547,3.35114730901528,0.510914110417183,0.718890747035522,0.599902730993408,0.508280908292259,4.19413790333504,4.57500602818627,2.63874139437015,4.51943232499919,5.11430914660661,3.94797284663164,3.0825839982874,7.73979165262404,2.98576729464223,1.51633655060205,1.89397670297827,2.86264974517948,2.75882525320168,2.70093194708024,3.46621081022145,4.89862793889561,5.25266253167884,5.15359485078509,7.24369438069244,1.5089759505299,2.64748512234947,3.51902248327898,4.60311038097907,5.83899223373756,4.52727816478817,4.32142486456681,7.96137067273973,0,0.257347907114715,0,3.72826390563903,1.40715635988658,4.32148947506436,5.44512891845984,3.14822770795846,4.31947916084659,1.62773761325285,4.82892122519315,3.61972561338225,5.43047504714485,5.08919138645195,6.80978000185188,4.23979963533464,3.51280184465681,4.02619256281115,4.6263788684108,3.80747065803352,0,0.528901133327089,4.05247676016945,4.41249676534833,2.31961430379768,2.01683524623343,2.2237804384487,1.71203063501303,1.89811624617805,2.79988223030818,1.75934646160189,1.59165177632921,1.9496408711912,3.59527763461689,1.08069024937347,0.995706366271836,5.50036912763937,5.36968009265725,2.25415471346161,5.29493452397817,4.07300223052014,5.04977903210294,11.1928670709935,9.88987991463334,9.73392112616524,4.44229790118482,2.07516838961004,1.50160595144485,2.55526693647164,1.57403478669398,1.01430060694251,1.20588579876208,1.52775511068852,2.30156909960649,1.13494658742525,0.549122826376163,2.87536413054709,1.86070473834252,2.49630138491648,2.77836765741823,1.97337154874103,1.92977408545347,4.80358294433172,3.03186258832776,1.95557971730431,2.37643120085263,3.98973422090454,2.84760637651087,4.28478553594825,5.07347484430277,6.46304090835383,7.0868700687608,8.92946704481928,4.42430949732493,6.90739927463582,6.36455857758651,4.52373851817817,1.63171705145613,1.96705709207614,0.551873492609465,2.56880943980467,5.39173758324135,33.7705987475951,3.7870639080656,8.20321370482267,7.41833614163613,7.75524231838076,11.709471099675,11.1399337041197,10.7569081699756,9.71545684019746,11.6902343164525,7.11518000303742,3.53453448063988,4.40014264145633,8.01295216502649,8.30723492703238,11.3829384851049,2.65490276679926,3.15614827001476,5.44182402536552,3.96070667487386,3.54362271456927,4.30409207121498,3.87642439752332,3.63533729477506,2.85197902707777,3.16036757935816,2.10837217149998,4.12542172992747,4.76615448055303,2.16073312837572,3.23396709456886,3.21505552547388,4.43350584105684,5.35106452806212,3.62007845324666,3.34911444026059,2.3467170806371,2.1183207086382,2.64634077665954,2.80306630000516,4.03661066739764,4.1012788951146,2.86493625607528,2.79039529566604,1.45740418314925,3.8939313422207,1.70870880797853,3.09580301944834,2.03713980106683,2.82552685507037,1.77702496037333,2.0590035588587,4.41943917984024,2.6590775941495,2.62579950228405,0.954670618015114,2.84702394223022,2.43983360552218,3.67218158794124,3.3454127362315,1.9652630737156,1.48350781023303,3.55409859618945,1.83229159388821,1.68499465279331,0.621339313086926,1.69107881605257,6.87776111802302,6.45288112782681,9.52810822885833,8.91202781996345,6.42033276864957,5.98521917093345,6.11960608766566,3.98465508817701,2.65742532908607,2.30424005006292,0.948033361884535,6.08175645870493,2.56777392912068,1.94881234466693,1.25318686967237,0.79472541912506,1.44234539423963,1.62458479892035,0.302899349844443,1.143102099825,0.705783295957884,1.26695244961678,1.25075394132428,1.98690733708667,2.26730383615211,6.88156455459601,5.56225910978749,5.54019234001459,3.28422309854724,3.94133198447482,6.41030684935428,3.21552568618599,2.00628841614145,5.0827665835536,1.84130094602871,3.43737308063638,4.64003592327956,3.42541259885321,3.0215755895588,4.72515750162264,2.2516060161211,2.71885445390523,2.5888015587591,3.21740777510948,3.19219898720825,5.80494259564056,5.83456120963906,3.14419743941973,4.22840069435032,2.00022055021454,2.88449080134452,3.85103051510178,4.80124702351215,2.78827229879264,3.01802146217722,3.09016974650612,4.60981097315059,3.67587001315925,2.38146845641537,4.75125736373908,4.05109362973781,5.76920261124629,2.50238164228475,2.05721551431249,3.01708870470874,2.38436189947321,3.19762116591123,4.04670335785922,4.39995961036718,3.47563148458268,3.41990624869196,3.66671107383827,2.80571135828869,3.55905054372522,4.62971067165148,3.6830793885272,4.80304207676495,3.08650577569826,5.24602213669686,3.97683734357194,4.72716318906256,1.14772999241306,2.8676884485537,5.10109238364927|short_description=p1@Socs5}}
|EntrezGene=56468
|HGNC=
|MCL_coexpression_id=230
|UniProt=O54928
|association_with_transcript=0bp_to_ENSMUST00000041369,NM_019654,uc008dup.1,uc008duq.1_5end
|description=CAGE_peak_1_at_Socs5_5end
|id=chr17:87506961..87507024,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000010!2.27e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0000010,2.21e-07,11
|phase1_expression=4.48416771893423,0,0,0.30246421130683,0.500895729946347,0.16787927191189,1.63528848416868,7.618276083053,4.08287294239834,13.3416780003536,3.93801326918661,4.54701306273417,1.71200729931206,2.62261207256992,2.6648780945253,2.02475267389826,1.39912375625629,7.25562980323947,7.26706498110415,6.79023442876848,3.82694805679814,4.76596565764249,2.87319768052829,0.159992422793407,0.91763712426868,0.57423196411502,0.430761996159075,0,0.190023419456374,0.756090389279792,0,3.17515336729816,0,0,0.288851619751275,0.831173226792462,0.816677425049476,0,0,0,0,0,0.485510353031154,67.4806944349094,88.5020609546362,91.4062825765174,2.34717403304412,1.96222640742402,3.29529274101708,1.74986909166855,3.77963338388479,4.31257693094915,8.22134769682908,4.35217285206807,4.7053131879945,18.2654199585522,8.02293631828519,12.3761302146586,4.04632921719196,2.11596391708813,2.53532561402472,7.79342423759004,3.55717918444456,4.49949858640699,3.9554654502679,3.5524005747305,1.79760066311043,2.68952813725088,2.07379224616955,1.89008313664367,1.68259969081106,3.42781181284564,2.20868540951614,1.10241719293459,0.958454710182364,3.67687514644008,5.50579404996943,4.08599481872601,4.91540906419979,2.2420668914133,3.20206752608434,1.56274011167028,3.62937898701795,3.37657566019008,4.5839474333043,5.59794312399969,5.41012387036591,5.40558392893372,30.6691082999395,8.99301565270748,10.4351215932604,3.44169550792555,0.679971333707751,0,0.649776417447669,1.79210754838934,1.82577746171277,7.6693645160126,8.83272415649754,12.7202246823722,6.90132756905734,8.98285341900225,17.8363667794652,0,1.73192832808971,1.77351905832569,2.02209778005913,1.82694207550496,3.6251303710604,11.7269289861212,11.7970022200972,8.22056791442781,8.76338889573022,9.04335843315735,7.99603208522793,15.2056575508907,1.23597483867187,2.74738778147832,0.884610551949874,3.88240439873782,3.97514733228708,3.87900202508178,0,2.92780797011547,3.35114730901528,0.510914110417183,0.718890747035522,0.599902730993408,0.508280908292259,4.19413790333504,4.57500602818627,2.63874139437015,4.51943232499919,5.11430914660661,3.94797284663164,3.0825839982874,7.73979165262404,2.98576729464223,1.51633655060205,1.89397670297827,2.86264974517948,2.75882525320168,2.70093194708024,3.46621081022145,4.89862793889561,5.25266253167884,5.15359485078509,7.24369438069244,1.5089759505299,2.64748512234947,3.51902248327898,4.60311038097907,5.83899223373756,4.52727816478817,4.32142486456681,7.96137067273973,0,0.257347907114715,0,3.72826390563903,1.40715635988658,4.32148947506436,5.44512891845984,3.14822770795846,4.31947916084659,1.62773761325285,4.82892122519315,3.61972561338225,5.43047504714485,5.08919138645195,6.80978000185188,4.23979963533464,3.51280184465681,4.02619256281115,4.6263788684108,3.80747065803352,0,0.528901133327089,4.05247676016945,4.41249676534833,2.31961430379768,2.01683524623343,2.2237804384487,1.71203063501303,1.89811624617805,2.79988223030818,1.75934646160189,1.59165177632921,1.9496408711912,3.59527763461689,1.08069024937347,0.995706366271836,5.50036912763937,5.36968009265725,2.25415471346161,5.29493452397817,4.07300223052014,5.04977903210294,11.1928670709935,9.88987991463334,9.73392112616524,4.44229790118482,2.07516838961004,1.50160595144485,2.55526693647164,1.57403478669398,1.01430060694251,1.20588579876208,1.52775511068852,2.30156909960649,1.13494658742525,0.549122826376163,2.87536413054709,1.86070473834252,2.49630138491648,2.77836765741823,1.97337154874103,1.92977408545347,4.80358294433172,3.03186258832776,1.95557971730431,2.37643120085263,3.98973422090454,2.84760637651087,4.28478553594825,5.07347484430277,6.46304090835383,7.0868700687608,8.92946704481928,4.42430949732493,6.90739927463582,6.36455857758651,4.52373851817817,1.63171705145613,1.96705709207614,0.551873492609465,2.56880943980467,5.39173758324135,33.7705987475951,3.7870639080656,8.20321370482267,7.41833614163613,7.75524231838076,11.709471099675,11.1399337041197,10.7569081699756,9.71545684019746,11.6902343164525,7.11518000303742,3.53453448063988,4.40014264145633,8.01295216502649,8.30723492703238,11.3829384851049,2.65490276679926,3.15614827001476,5.44182402536552,3.96070667487386,3.54362271456927,4.30409207121498,3.87642439752332,3.63533729477506,2.85197902707777,3.16036757935816,2.10837217149998,4.12542172992747,4.76615448055303,2.16073312837572,3.23396709456886,3.21505552547388,4.43350584105684,5.35106452806212,3.62007845324666,3.34911444026059,2.3467170806371,2.1183207086382,2.64634077665954,2.80306630000516,4.03661066739764,4.1012788951146,2.86493625607528,2.79039529566604,1.45740418314925,3.8939313422207,1.70870880797853,3.09580301944834,2.03713980106683,2.82552685507037,1.77702496037333,2.0590035588587,4.41943917984024,2.6590775941495,2.62579950228405,0.954670618015114,2.84702394223022,2.43983360552218,3.67218158794124,3.3454127362315,1.9652630737156,1.48350781023303,3.55409859618945,1.83229159388821,1.68499465279331,0.621339313086926,1.69107881605257,6.87776111802302,6.45288112782681,9.52810822885833,8.91202781996345,6.42033276864957,5.98521917093345,6.11960608766566,3.98465508817701,2.65742532908607,2.30424005006292,0.948033361884535,6.08175645870493,2.56777392912068,1.94881234466693,1.25318686967237,0.79472541912506,1.44234539423963,1.62458479892035,0.302899349844443,1.143102099825,0.705783295957884,1.26695244961678,1.25075394132428,1.98690733708667,2.26730383615211,6.88156455459601,5.56225910978749,5.54019234001459,3.28422309854724,3.94133198447482,6.41030684935428,3.21552568618599,2.00628841614145,5.0827665835536,1.84130094602871,3.43737308063638,4.64003592327956,3.42541259885321,3.0215755895588,4.72515750162264,2.2516060161211,2.71885445390523,2.5888015587591,3.21740777510948,3.19219898720825,5.80494259564056,5.83456120963906,3.14419743941973,4.22840069435032,2.00022055021454,2.88449080134452,3.85103051510178,4.80124702351215,2.78827229879264,3.01802146217722,3.09016974650612,4.60981097315059,3.67587001315925,2.38146845641537,4.75125736373908,4.05109362973781,5.76920261124629,2.50238164228475,2.05721551431249,3.01708870470874,2.38436189947321,3.19762116591123,4.04670335785922,4.39995961036718,3.47563148458268,3.41990624869196,3.66671107383827,2.80571135828869,3.55905054372522,4.62971067165148,3.6830793885272,4.80304207676495,3.08650577569826,5.24602213669686,3.97683734357194,4.72716318906256,1.14772999241306,2.8676884485537,5.10109238364927
|short_description=p1@Socs5
}}

Revision as of 15:34, 13 September 2013

Short description:p1@Socs5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Socs5_5end
Coexpression cluster:MCL_coexpression_mm9:230
Association with transcript: 0bp_to_ENSMUST00000041369, NM_019654, uc008dup.1, uc008duq.1_5end
EntrezGene:Socs5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Socs5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.62
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D867.48
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D988.50
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B391.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A28.22
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.38
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D930.67
Mouse Schwann, donor2.CNhs12573.11746-123F98.99
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I817.84
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.83
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D711.73
adrenal gland, embryo E14.CNhs11038.406-44C511.80
adrenal gland, embryo E16.CNhs11004.1254-43D68.22
adrenal gland, embryo E17.CNhs11043.1263-45I18.76
adrenal gland, embryo E18.CNhs11026.1262-18F59.04
adrenal gland, neonate N00.CNhs11191.1311-23C18.00
adrenal gland, neonate N25.CNhs11223.1377-27I315.21
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B23.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.74
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C62.86
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C64.90
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G85.15
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.65
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A84.60
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I67.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C64.32
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G16.81
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D33.51
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F85.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G75.05
kidney, neonate N10.CNhs11206.758-6D511.19
kidney, neonate N20.CNhs11113.832-19I19.89
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F41.13
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E68.93
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H26.36
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C733.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.71
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.76
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.69
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I48.31
oviduct, adult pregnant day01.CNhs10500.988-6G611.38
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G44.04
skin, neonate N03.CNhs11215.662-22H34.10
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.83
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.63
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B81.48
stomach, neonate N07.CNhs11210.718-18A93.55
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F56.88
testis, embryo E15.CNhs11034.443-27C56.45
testis, embryo E16.CNhs11033.470-26G59.53
testis, embryo E17.CNhs11029.486-18I58.91
testis, embryo E18.CNhs11027.503-18G56.42
testis, neonate N00.CNhs11189.1300-22B75.99
testis, neonate N07.CNhs11222.726-26I46.12
testis, neonate N10.CNhs11204.763-44D93.98
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.25
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.56
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.54
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I83.22
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F93.09
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
peripheral nervous system2.21e-0711







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:87506961..87507024,%2B&oldid=2948861"