FFCP PHASE1:Mm9::chr10:94309614..94309618,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:94309614..94309618,+|id=chr10:94309614..94309618,+|ontology_enrichment_celltype=CL:0000945!1.74e-08!1;CL:0000236!1.74e-08!1;CL:0000826!1.74e-08!1;CL:0000355!3.29e-08!9|ontology_enrichment_celltype_v019_2=CL:0000355,1.96e-22,9|ontology_enrichment_disease=DOID:0060100!2.00e-23!3;DOID:4045!2.00e-23!3;DOID:0050686!4.86e-12!6|ontology_enrichment_disease_v019_2=DOID:0060100,6.04e-65,3;DOID:4045,6.04e-65,3;DOID:0050686,4.33e-33,6|ontology_enrichment_uberon=UBERON:0001134!3.29e-08!9;UBERON:0002036!3.29e-08!9;UBERON:0002385!3.29e-08!9;UBERON:0000486!3.29e-08!9;UBERON:0001015!3.29e-08!9;UBERON:0004290!3.29e-08!9;UBERON:0003082!3.29e-08!9;UBERON:0000383!1.94e-07!10;UBERON:0002329!8.31e-07!11;UBERON:0003077!8.31e-07!11;UBERON:0003059!8.31e-07!11;UBERON:0007282!8.31e-07!11;UBERON:0009618!8.31e-07!11;UBERON:0007285!8.31e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.96e-22,9;UBERON:0002036,1.96e-22,9;UBERON:0002385,1.96e-22,9;UBERON:0000486,1.96e-22,9;UBERON:0007503,1.96e-22,9;UBERON:0001015,1.96e-22,9;UBERON:0002329,1.96e-22,9;UBERON:0003082,1.96e-22,9;UBERON:0003059,1.96e-22,9;UBERON:0007282,1.96e-22,9;UBERON:0004290,1.96e-22,9;UBERON:0009618,1.96e-22,9;UBERON:0000383,2.69e-20,10;UBERON:0007524,1.51e-18,11;UBERON:0003077,1.51e-18,11;UBERON:0007285,1.51e-18,11;UBERON:0002204,5.85e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,2.3440060335714,2.61761871986899,10.5881667845583,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr10:94309614..94309618,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:94309614..94309618,+ | |||
|id=chr10:94309614..94309618,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.74e-08!1;CL:0000236!1.74e-08!1;CL:0000826!1.74e-08!1;CL:0000355!3.29e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.96e-22,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.00e-23!3;DOID:4045!2.00e-23!3;DOID:0050686!4.86e-12!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.04e-65,3;DOID:4045,6.04e-65,3;DOID:0050686,4.33e-33,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!3.29e-08!9;UBERON:0002036!3.29e-08!9;UBERON:0002385!3.29e-08!9;UBERON:0000486!3.29e-08!9;UBERON:0001015!3.29e-08!9;UBERON:0004290!3.29e-08!9;UBERON:0003082!3.29e-08!9;UBERON:0000383!1.94e-07!10;UBERON:0002329!8.31e-07!11;UBERON:0003077!8.31e-07!11;UBERON:0003059!8.31e-07!11;UBERON:0007282!8.31e-07!11;UBERON:0009618!8.31e-07!11;UBERON:0007285!8.31e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.96e-22,9;UBERON:0002036,1.96e-22,9;UBERON:0002385,1.96e-22,9;UBERON:0000486,1.96e-22,9;UBERON:0007503,1.96e-22,9;UBERON:0001015,1.96e-22,9;UBERON:0002329,1.96e-22,9;UBERON:0003082,1.96e-22,9;UBERON:0003059,1.96e-22,9;UBERON:0007282,1.96e-22,9;UBERON:0004290,1.96e-22,9;UBERON:0009618,1.96e-22,9;UBERON:0000383,2.69e-20,10;UBERON:0007524,1.51e-18,11;UBERON:0003077,1.51e-18,11;UBERON:0007285,1.51e-18,11;UBERON:0002204,5.85e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.76678467663217,2.3440060335714,2.61761871986899,10.5881667845583,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr10:94309614..94309618,+ | |||
}} |
Revision as of 18:02, 12 September 2013
Short description: | p@chr10:94309614..94309618, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:94309614..94309618, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.96e-22 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.96e-22 | 9 |
striated muscle tissue | 1.96e-22 | 9 |
muscle tissue | 1.96e-22 | 9 |
multilaminar epithelium | 1.96e-22 | 9 |
epithelial vesicle | 1.96e-22 | 9 |
musculature | 1.96e-22 | 9 |
somite | 1.96e-22 | 9 |
myotome | 1.96e-22 | 9 |
presomitic mesoderm | 1.96e-22 | 9 |
presumptive segmental plate | 1.96e-22 | 9 |
dermomyotome | 1.96e-22 | 9 |
trunk paraxial mesoderm | 1.96e-22 | 9 |
musculature of body | 2.69e-20 | 10 |
dense mesenchyme tissue | 1.51e-18 | 11 |
paraxial mesoderm | 1.51e-18 | 11 |
presumptive paraxial mesoderm | 1.51e-18 | 11 |
musculoskeletal system | 5.85e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.04e-65 | 3 |
muscle cancer | 6.04e-65 | 3 |
organ system cancer | 4.33e-33 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.