FFCP PHASE1:Mm9::chr3:60332185..60332238,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56758|HGNC=|MCL_coexpression_id=1|UniProt=Q9JKP5|association_with_transcript=-439bp_to_uc008pjg.1,uc008pjh.1_5end|description=CAGE_peak_6_at_Mbnl1_5end|id=chr3:60332185..60332238,+|ontology_enrichment_celltype=CL:0000393!5.95e-07!39;CL:0000211!5.95e-07!39|ontology_enrichment_celltype_v019_2=CL:0000393,5.30e-07,39;CL:0000211,5.30e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.71e-17!102;UBERON:0000924!5.71e-17!102;UBERON:0006601!5.71e-17!102;UBERON:0000073!6.37e-15!75;UBERON:0001016!6.37e-15!75;UBERON:0001017!3.65e-14!73;UBERON:0005743!3.65e-14!73;UBERON:0002346!1.72e-11!71;UBERON:0003075!1.72e-11!71;UBERON:0007284!1.72e-11!71;UBERON:0000033!2.50e-11!63;UBERON:0000955!3.25e-10!50;UBERON:0006238!3.25e-10!50;UBERON:0001049!7.15e-10!52;UBERON:0005068!7.15e-10!52;UBERON:0006241!7.15e-10!52;UBERON:0007135!7.15e-10!52;UBERON:0002616!9.84e-10!49;UBERON:0002021!1.40e-07!10;UBERON:0000411!1.40e-07!10;UBERON:0001950!1.40e-07!10;UBERON:0002020!2.81e-07!34;UBERON:0004111!3.18e-07!122;UBERON:0003080!4.07e-07!40;UBERON:0003056!4.87e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.43e-16,95;UBERON:0000924,4.43e-16,95;UBERON:0006601,4.43e-16,95;UBERON:0010314,3.02e-15,92;UBERON:0001016,6.51e-15,75;UBERON:0001017,3.77e-14,73;UBERON:0010371,1.49e-11,73;UBERON:0002346,7.52e-11,64;UBERON:0003075,7.52e-11,64;UBERON:0007284,7.52e-11,64;UBERON:0000073,7.90e-11,54;UBERON:0001049,7.93e-10,52;UBERON:0005068,7.93e-10,52;UBERON:0006241,7.93e-10,52;UBERON:0007135,7.93e-10,52;UBERON:0000955,1.26e-08,47;UBERON:0006238,1.26e-08,47;UBERON:0002616,3.62e-08,46;UBERON:0002021,1.23e-07,10;UBERON:0000411,1.23e-07,10;UBERON:0001950,1.23e-07,10;UBERON:0002020,2.48e-07,34;UBERON:0003080,3.81e-07,40;UBERON:0003056,4.55e-07,49;UBERON:0004111,6.01e-07,122|phase1_expression=4.48416771893423,0,0.454999239389536,0.90739263392049,0.500895729946347,0.839396359559449,0.467225281191051,0.129123323441576,0.985521055061667,0.70219357896598,17.977886663678,7.81767158154297,0.342401459862411,0.34968160967599,0,0,0,0.473193248037357,0.685572168028694,0,8.33424243480484,0.0992909512008853,0,1.59992422793407,1.37645568640302,1.14846392823004,0.86152399231815,1.07735616342945,0.950117097281869,2.01624103807945,1.33038306393183,0,0,0,0.288851619751275,0.332469290716985,0.204169356262369,0,0,0,0,0,0,9.19046771221714,8.92116994731728,7.70896359079063,0.782391344348039,1.96222640742402,1.97717564461025,2.72201858703997,2.2397827460058,2.87505128729943,0.671130424230945,0,0.672187598284928,11.3194151855817,7.44986943840768,3.6097046459421,4.04632921719196,3.70293685490423,2.53532561402472,1.0165335962074,0,0.449949858640699,0,0.7104801149461,2.09720077362883,3.45796474789399,1.97010263386108,2.56511282830212,2.94454945891935,6.56997264128748,7.28866185140325,2.20483438586917,1.82106394934649,1.83843757322004,36.3382407297983,24.515968912356,23.8090126547177,1.71452174049252,3.11057988248193,6.77187381723788,19.5428099300967,10.6924895906019,19.8637722109853,7.66034322231536,10.5355043791336,5.40558392893372,9.31432177998164,9.29530189313462,3.18850937571846,0,1.3599426674155,2.69851595818909,0.649776417447669,3.13618820968135,17.2746636762055,11.930122580464,7.01422212427746,9.89350808628953,8.59144860637751,11.5493829672886,5.09610479413291,0,0.649473123033642,1.26679932737549,0,6.96521666286266,4.40194402200192,15.8833088799362,3.29622120855658,5.48037860961854,3.92046345335299,3.61734337326294,6.23220147819235,5.15233024451669,0.741584903203122,9.39895819979426,4.42305275974937,11.8089800461609,9.05450225687614,10.1823803158397,0,28.1069565131085,18.6407569063975,1.27728527604296,0.838705871541442,0,1.27070227073065,27.4116870110826,26.992535566299,2.38743269014442,32.3313235557634,23.7815375317207,27.6358099264215,18.3332627266566,2.64782346010822,8.8328949133166,6.31806896084187,10.9429765060966,1.17108398666433,1.37941262660084,3.96136685571768,2.86339153887859,4.69451844144162,7.68682321709099,3.93547243150861,9.05461797586555,0.215567992932842,2.45837904218165,3.69497360744293,5.47989331068937,4.44875598760957,7.66154766348766,8.64284972913362,1.99034266818493,0.702213187313235,1.02939162845886,1.42081749697796,2.89976081549703,4.92504725960302,4.32148947506436,5.20838418287463,5.70616272067471,6.32495162838251,4.41814495025775,5.633741429392,4.90414437942112,4.77223564749093,4.76085645829376,9.56611952641098,10.9649990568999,9.44065495751518,7.24714661306008,34.4875515645169,6.68879980465349,0,1.32225283331772,1.91959425481711,1.62565670302307,2.44848176511977,1.81515172161008,1.77902435075896,1.71203063501303,0,1.31759163779209,1.50801125280162,1.59165177632921,0.974820435595601,0,1.29682829924817,0.796565093017469,1.32767530667157,3.42745537829186,3.38123207019241,3.25842124552503,4.46090720485539,3.43665517462561,5.12215950706484,8.56138858281692,7.53593893638599,6.04646103216823,0.889357881261447,0.333690211432188,0.982794975566015,0.899448449539415,1.014300606942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| ||
|EntrezGene=56758 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9JKP5 | |||
|association_with_transcript=-439bp_to_uc008pjg.1,uc008pjh.1_5end | |||
|description=CAGE_peak_6_at_Mbnl1_5end | |||
|id=chr3:60332185..60332238,+ | |||
|ontology_enrichment_celltype=CL:0000393!5.95e-07!39;CL:0000211!5.95e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,5.30e-07,39;CL:0000211,5.30e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.71e-17!102;UBERON:0000924!5.71e-17!102;UBERON:0006601!5.71e-17!102;UBERON:0000073!6.37e-15!75;UBERON:0001016!6.37e-15!75;UBERON:0001017!3.65e-14!73;UBERON:0005743!3.65e-14!73;UBERON:0002346!1.72e-11!71;UBERON:0003075!1.72e-11!71;UBERON:0007284!1.72e-11!71;UBERON:0000033!2.50e-11!63;UBERON:0000955!3.25e-10!50;UBERON:0006238!3.25e-10!50;UBERON:0001049!7.15e-10!52;UBERON:0005068!7.15e-10!52;UBERON:0006241!7.15e-10!52;UBERON:0007135!7.15e-10!52;UBERON:0002616!9.84e-10!49;UBERON:0002021!1.40e-07!10;UBERON:0000411!1.40e-07!10;UBERON:0001950!1.40e-07!10;UBERON:0002020!2.81e-07!34;UBERON:0004111!3.18e-07!122;UBERON:0003080!4.07e-07!40;UBERON:0003056!4.87e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.43e-16,95;UBERON:0000924,4.43e-16,95;UBERON:0006601,4.43e-16,95;UBERON:0010314,3.02e-15,92;UBERON:0001016,6.51e-15,75;UBERON:0001017,3.77e-14,73;UBERON:0010371,1.49e-11,73;UBERON:0002346,7.52e-11,64;UBERON:0003075,7.52e-11,64;UBERON:0007284,7.52e-11,64;UBERON:0000073,7.90e-11,54;UBERON:0001049,7.93e-10,52;UBERON:0005068,7.93e-10,52;UBERON:0006241,7.93e-10,52;UBERON:0007135,7.93e-10,52;UBERON:0000955,1.26e-08,47;UBERON:0006238,1.26e-08,47;UBERON:0002616,3.62e-08,46;UBERON:0002021,1.23e-07,10;UBERON:0000411,1.23e-07,10;UBERON:0001950,1.23e-07,10;UBERON:0002020,2.48e-07,34;UBERON:0003080,3.81e-07,40;UBERON:0003056,4.55e-07,49;UBERON:0004111,6.01e-07,122 | |||
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| |||
|short_description=p6@Mbnl1 | |||
}} |
Revision as of 02:24, 14 September 2013
Short description: | p6@Mbnl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Mbnl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -439bp_to_uc008pjg.1, uc008pjh.1_5end |
EntrezGene: | Mbnl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 5.30e-07 | 39 |
electrically active cell | 5.30e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.43e-16 | 95 |
ectoderm | 4.43e-16 | 95 |
presumptive ectoderm | 4.43e-16 | 95 |
structure with developmental contribution from neural crest | 3.02e-15 | 92 |
nervous system | 6.51e-15 | 75 |
central nervous system | 3.77e-14 | 73 |
ecto-epithelium | 1.49e-11 | 73 |
neurectoderm | 7.52e-11 | 64 |
neural plate | 7.52e-11 | 64 |
presumptive neural plate | 7.52e-11 | 64 |
regional part of nervous system | 7.90e-11 | 54 |
neural tube | 7.93e-10 | 52 |
neural rod | 7.93e-10 | 52 |
future spinal cord | 7.93e-10 | 52 |
neural keel | 7.93e-10 | 52 |
brain | 1.26e-08 | 47 |
future brain | 1.26e-08 | 47 |
regional part of brain | 3.62e-08 | 46 |
occipital lobe | 1.23e-07 | 10 |
visual cortex | 1.23e-07 | 10 |
neocortex | 1.23e-07 | 10 |
gray matter | 2.48e-07 | 34 |
anterior neural tube | 3.81e-07 | 40 |
pre-chordal neural plate | 4.55e-07 | 49 |
anatomical conduit | 6.01e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.