FFCP PHASE1:Mm9::chr4:34634631..34634701,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=24060|HGNC=|UniProt=Q61420|association_with_transcript=0bp_to_ENSMUST00000029970,ENSMUST00000154020,NM_011895,uc012dbo.1_5end|description=CAGE_peak_1_at_Slc35a1_5end|id=chr4:34634631..34634701,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!1.30e-08!27;UBERON:0009569!1.18e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.18e-07,66;UBERON:0002100,1.62e-07,90;UBERON:0005409,2.98e-07,47;UBERON:0005177,6.36e-07,79|phase1_expression=13.7728008510123,5.93258192986914,4.54999239389536,3.32710632437513,4.50806156951712,14.1018588405987,13.315920513945,3.35720640948098,0.422366166455,0.468129052643987,2.91070545983358,2.79202556483677,1.71200729931206,1.31130603628496,5.66286595086627,5.26435695213547,5.59649502502517,2.99689057090326,3.01651753932625,2.54633791078818,6.80346321208558,4.86525660884338,2.87319768052829,13.9193407830264,17.8939239232393,8.6134794617253,9.04600191934057,10.9890328669803,24.3229976904159,18.146169342715,21.5078595335646,6.98533740805594,9.84103660135312,0,10.3986583110459,20.4468613790946,14.9043630071529,2.09265815368454,3.906676722619,3.14114246384279,0.588231488031014,2.73218193983378,2.42755176515577,20.6470781479947,22.2015479370737,19.8230492334616,7.82391344348039,2.8343270329458,4.61340983742391,8.94377535741704,6.85933465964276,5.75010257459886,1.00669563634642,0.725362142011344,1.00828139742739,20.3234954468398,16.6189395164479,16.5015069528782,4.04632921719196,8.46385566835253,3.80298842103708,6.43804610931351,8.89294796111139,2.2497492932035,4.94433181283487,5.6838409195688,2.39680088414724,4.61061966385865,10.4726508431562,7.42532660824299,8.41299845405528,4.57041575046086,4.41737081903227,7.7169203505421,5.46319184803947,6.43453150627015,1.10115880999389,4.21368215681119,4.45458946443106,5.67111037239834,4.94033275453012,6.77187381723788,6.14202597803038,7.31591393041184,5.04234217663473,8.83885756421003,9.96601765593721,9.13357284543973,9.46577416664801,9.67315969366855,8.98579914975201,23.2314446784974,14.9593693415705,19.4293148989614,16.2444104361917,11.6486990645307,11.7973312910672,16.7021716126497,18.1850203222008,13.0735642568826,14.3660288172214,2.56652954828636,7.64415719119937,14.2213340630666,21.8655951421326,21.5355885653834,22.2430755806505,15.6431915215112,10.0985774622397,15.5864246018066,15.0932234286538,21.617048960162,21.9084722393256,19.5939432718409,20.4604350416126,20.7349875693965,7.91023896749996,9.25435884287435,2.65383165584962,10.0295446967394,5.74187947997023,6.30337829075789,72.6927868750676,7.02673912827713,5.23616767033638,12.517395705221,2.03685711660064,1.79970819298022,1.52484272487678,6.14141621559773,7.77751024791665,7.03664371832041,5.73620256634512,5.11430914660661,6.64921742590592,4.70499662896497,15.1740652136971,6.22034853050465,6.82351447770922,14.3100462002802,14.053007839972,17.7024620413774,14.4049703844279,12.3577950625286,11.5662048557257,13.9643955110486,14.8048724804372,12.1590584247337,11.4251036254406,14.1829560125864,17.5951124163949,9.86380795924087,12.7901734643775,8.70630416305416,11.5237996388448,16.1217756122979,0,2.31613116403244,2.84163499395593,14.0845525324141,12.4298811789981,12.9644684251931,15.6251525486239,8.65762619688577,15.5809784016252,13.9520366850245,16.0964040839772,12.6106569756543,11.8483091937706,10.9992200932994,8.99863785958999,6.57899943413995,11.6361561104257,7.38135303182045,6.9395683026162,13.0688857721691,7.93005079161115,9.78467096655114,15.7833305396073,15.3276203427889,18.4280469690593,18.1515172161008,23.7944506914011,27.3924901602085,13.7613427847908,20.9167672499494,26.8928673416288,25.8643413653496,30.0244694163445,8.08937467788799,36.0950543290739,40.4256784706365,11.0007382552787,16.1090402779718,9.01661885384643,18.9395734896142,20.5589636397683,15.9909669349926,23.0813360503539,15.4990655378582,22.607816809158,23.1986668172985,17.4907049981418,9.84386123724955,8.64859578498093,6.97072548393047,10.1430060694251,8.68237775108701,8.40265310878685,6.90470729881945,5.18832725680113,14.0026320725922,17.2521847832825,11.9085103253921,20.594486425561,15.4073115547738,20.6307025550199,10.6137574699941,11.0851914099963,15.5382957651798,17.4372524792968,15.2770577197669,19.4792906079457,19.7657383781343,14.5206620940468,11.5128852236101,18.2856767163182,16.3883870340093,21.5263937687608,12.7813385478276,15.5416483679306,11.1379775107764,0,2.17562273527484,24.5882136509518,16.5562047782839,7.86697890940181,5.74337264301796,17.8689090460576,7.82659874333556,20.1925260426404,24.5976408906882,21.5423397732799,17.6836910484888,21.3886727119098,13.3045969470751,23.8838313988188,16.6585839009448,16.9973744517005,6.10510501201433,16.3231097989509,11.0400674273698,15.3113741792362,13.1976098378028,5.30980553359851,10.4395673546642,14.2092071773433,14.3339860614483,6.496641643377,9.22305443831782,14.7304127105886,11.2695456138027,11.0514187299264,11.0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| ||
|EntrezGene=24060 | |||
|HGNC= | |||
|UniProt=Q61420 | |||
|association_with_transcript=0bp_to_ENSMUST00000029970,ENSMUST00000154020,NM_011895,uc012dbo.1_5end | |||
|description=CAGE_peak_1_at_Slc35a1_5end | |||
|id=chr4:34634631..34634701,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!1.30e-08!27;UBERON:0009569!1.18e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.18e-07,66;UBERON:0002100,1.62e-07,90;UBERON:0005409,2.98e-07,47;UBERON:0005177,6.36e-07,79 | |||
|phase1_expression=13.7728008510123,5.93258192986914,4.54999239389536,3.32710632437513,4.50806156951712,14.1018588405987,13.315920513945,3.35720640948098,0.422366166455,0.468129052643987,2.91070545983358,2.79202556483677,1.71200729931206,1.31130603628496,5.66286595086627,5.26435695213547,5.59649502502517,2.99689057090326,3.01651753932625,2.54633791078818,6.80346321208558,4.86525660884338,2.87319768052829,13.9193407830264,17.8939239232393,8.6134794617253,9.04600191934057,10.9890328669803,24.3229976904159,18.146169342715,21.5078595335646,6.98533740805594,9.84103660135312,0,10.3986583110459,20.4468613790946,14.9043630071529,2.09265815368454,3.906676722619,3.14114246384279,0.588231488031014,2.73218193983378,2.42755176515577,20.6470781479947,22.2015479370737,19.8230492334616,7.82391344348039,2.8343270329458,4.61340983742391,8.94377535741704,6.85933465964276,5.75010257459886,1.00669563634642,0.725362142011344,1.00828139742739,20.3234954468398,16.6189395164479,16.5015069528782,4.04632921719196,8.46385566835253,3.80298842103708,6.43804610931351,8.89294796111139,2.2497492932035,4.94433181283487,5.6838409195688,2.39680088414724,4.61061966385865,10.4726508431562,7.42532660824299,8.41299845405528,4.57041575046086,4.41737081903227,7.7169203505421,5.46319184803947,6.43453150627015,1.10115880999389,4.21368215681119,4.45458946443106,5.67111037239834,4.94033275453012,6.77187381723788,6.14202597803038,7.31591393041184,5.04234217663473,8.83885756421003,9.96601765593721,9.13357284543973,9.46577416664801,9.67315969366855,8.98579914975201,23.2314446784974,14.9593693415705,19.4293148989614,16.2444104361917,11.6486990645307,11.7973312910672,16.7021716126497,18.1850203222008,13.0735642568826,14.3660288172214,2.56652954828636,7.64415719119937,14.2213340630666,21.8655951421326,21.5355885653834,22.2430755806505,15.6431915215112,10.0985774622397,15.5864246018066,15.0932234286538,21.617048960162,21.9084722393256,19.5939432718409,20.4604350416126,20.7349875693965,7.91023896749996,9.25435884287435,2.65383165584962,10.0295446967394,5.74187947997023,6.30337829075789,72.6927868750676,7.02673912827713,5.23616767033638,12.517395705221,2.03685711660064,1.79970819298022,1.52484272487678,6.14141621559773,7.77751024791665,7.03664371832041,5.73620256634512,5.11430914660661,6.64921742590592,4.70499662896497,15.1740652136971,6.22034853050465,6.82351447770922,14.3100462002802,14.053007839972,17.7024620413774,14.4049703844279,12.3577950625286,11.5662048557257,13.9643955110486,14.8048724804372,12.1590584247337,11.4251036254406,14.1829560125864,17.5951124163949,9.86380795924087,12.7901734643775,8.70630416305416,11.5237996388448,16.1217756122979,0,2.31613116403244,2.84163499395593,14.0845525324141,12.4298811789981,12.9644684251931,15.6251525486239,8.65762619688577,15.5809784016252,13.9520366850245,16.0964040839772,12.6106569756543,11.8483091937706,10.9992200932994,8.99863785958999,6.57899943413995,11.6361561104257,7.38135303182045,6.9395683026162,13.0688857721691,7.93005079161115,9.78467096655114,15.7833305396073,15.3276203427889,18.4280469690593,18.1515172161008,23.7944506914011,27.3924901602085,13.7613427847908,20.9167672499494,26.8928673416288,25.8643413653496,30.0244694163445,8.08937467788799,36.0950543290739,40.4256784706365,11.0007382552787,16.1090402779718,9.01661885384643,18.9395734896142,20.5589636397683,15.9909669349926,23.0813360503539,15.4990655378582,22.607816809158,23.1986668172985,17.4907049981418,9.84386123724955,8.64859578498093,6.97072548393047,10.1430060694251,8.68237775108701,8.40265310878685,6.90470729881945,5.18832725680113,14.0026320725922,17.2521847832825,11.9085103253921,20.594486425561,15.4073115547738,20.6307025550199,10.6137574699941,11.0851914099963,15.5382957651798,17.4372524792968,15.2770577197669,19.4792906079457,19.7657383781343,14.5206620940468,11.5128852236101,18.2856767163182,16.3883870340093,21.5263937687608,12.7813385478276,15.5416483679306,11.1379775107764,0,2.17562273527484,24.5882136509518,16.5562047782839,7.86697890940181,5.74337264301796,17.8689090460576,7.82659874333556,20.1925260426404,24.5976408906882,21.5423397732799,17.6836910484888,21.3886727119098,13.3045969470751,23.8838313988188,16.6585839009448,16.9973744517005,6.10510501201433,16.3231097989509,11.0400674273698,15.3113741792362,13.1976098378028,5.30980553359851,10.4395673546642,14.2092071773433,14.3339860614483,6.496641643377,9.22305443831782,14.7304127105886,11.2695456138027,11.0514187299264,11.0612865277536,9.48767477174989,10.3135543248187,13.6175842301515,12.0640933000978,9.9606186512721,13.7175702420219,15.2512600932355,14.9829806785739,16.1258040190079,7.00269382963578,18.7737366450968,23.513359865884,16.5396298541221,13.3557864882599,8.23468576149118,8.92631288936707,10.0272768962635,10.1767357841938,16.3229268512716,6.48988557036784,4.61351378154202,13.8279201535359,14.8155621895769,6.40452753815949,7.10809984149331,6.40578884978263,2.54967644990783,2.09927178485487,2.48759952847963,26.7307773044232,15.8167996790568,18.0954325742895,20.845030778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| |||
|short_description=p1@Slc35a1 | |||
}} | |||
Revision as of 04:53, 14 September 2013
| Short description: | p1@Slc35a1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Slc35a1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000029970, ENSMUST00000154020, NM_011895, uc012dbo.1_5end |
| EntrezGene: | Slc35a1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| subdivision of trunk | 1.18e-07 | 66 |
| trunk | 1.62e-07 | 90 |
| gastrointestinal system | 2.98e-07 | 47 |
| trunk region element | 6.36e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
