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FFCP PHASE1:Mm9::chr7:28327793..28327828,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=18807|HGNC=|MCL_coexpression_id=799|UniProt=D3Z179|association_with_transcript=-29bp_to_ENSMUST00000150964_5end|description=CAGE_peak_1_at_Pld3_5end|id=chr7:28327793..28327828,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!7.75e-17!102;UBERON:0000924!7.75e-17!102;UBERON:0006601!7.75e-17!102;UBERON:0001049!4.80e-16!52;UBERON:0005068!4.80e-16!52;UBERON:0006241!4.80e-16!52;UBERON:0007135!4.80e-16!52;UBERON:0001017!9.51e-16!73;UBERON:0005743!9.51e-16!73;UBERON:0000073!1.02e-15!75;UBERON:0001016!1.02e-15!75;UBERON:0000955!2.26e-15!50;UBERON:0006238!2.26e-15!50;UBERON:0002616!6.83e-15!49;UBERON:0002346!3.25e-13!71;UBERON:0003075!3.25e-13!71;UBERON:0007284!3.25e-13!71;UBERON:0000033!6.71e-13!63;UBERON:0003080!2.92e-12!40;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0007811!2.03e-11!86;UBERON:0000153!2.64e-11!94;UBERON:0002020!7.85e-11!34;UBERON:0003056!4.48e-10!49;UBERON:0000475!4.22e-09!200;UBERON:0002791!8.57e-09!29;UBERON:0003528!8.57e-09!29;UBERON:0001893!8.57e-09!29;UBERON:0002021!6.42e-08!10;UBERON:0000411!6.42e-08!10;UBERON:0001950!6.42e-08!10;UBERON:0002619!9.62e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.98e-17,54;UBERON:0001049,4.80e-16,52;UBERON:0005068,4.80e-16,52;UBERON:0006241,4.80e-16,52;UBERON:0007135,4.80e-16,52;UBERON:0004121,7.66e-16,95;UBERON:0000924,7.66e-16,95;UBERON:0006601,7.66e-16,95;UBERON:0001017,9.51e-16,73;UBERON:0001016,1.02e-15,75;UBERON:0000955,7.96e-14,47;UBERON:0006238,7.96e-14,47;UBERON:0010371,2.12e-13,73;UBERON:0002616,2.34e-13,46;UBERON:0002346,1.95e-12,64;UBERON:0003075,1.95e-12,64;UBERON:0007284,1.95e-12,64;UBERON:0003080,2.92e-12,40;UBERON:0002780,1.00e-11,39;UBERON:0001890,1.00e-11,39;UBERON:0006240,1.00e-11,39;UBERON:0002020,7.85e-11,34;UBERON:0003056,4.48e-10,49;UBERON:0003528,8.57e-09,29;UBERON:0002791,8.57e-09,29;UBERON:0001893,8.57e-09,29;UBERON:0002021,6.42e-08,10;UBERON:0000411,6.42e-08,10;UBERON:0001950,6.42e-08,10;UBERON:0010314,1.60e-07,92;UBERON:0002619,9.62e-07,17|phase1_expression=61.3370084411361,25.126229350034,31.8499467572675,2.41971369045464,4.50806156951712,21.9921846204576,34.5746708081378,92.8396695544933,105.169175447295,119.606972950539,29.9631444394634,15.2364823681093,104.946047447829,116.356555619686,99.2667090210675,101.237633694913,112.629462378632,60.7264668314608,66.2262714315718,62.8096684661085,176.805000224074,23.1347916298063,16.194386926614,44.4778935365671,46.5700840566355,31.5827580263261,47.3838195774982,47.6191424235815,11.0213583284697,9.57714493087737,35.2551511941934,28.5763803056834,20.2971379902908,0,5.77703239502549,5.31950865147176,4.69589519403449,16.3227335987394,7.813353445238,6.80580867165938,16.4704816648684,18.442228093878,11.6522484727477,141.633920222524,129.762471960979,150.141243268255,389.630889485324,93.750817243592,171.794594898357,160.793526534432,97.710522294503,102.06432069913,60.9050859989583,121.135477715895,212.74737485718,128.115199145902,167.622062364173,92.3053045176622,107.834673638166,148.117474196169,95.7085419294331,178.232223868363,144.065756970005,1515.43112390188,2088.48575774145,1806.04045219299,513.214989318027,344.643819873434,48.4230489480591,55.2174287776615,58.6806642170356,340.21032242493,356.040088014001,49.2413012844115,40.3509432986775,40.4456266108409,386.506742307854,396.086122740252,394.922397001802,128.457244249209,129.637990984614,119.289161857498,409.840642534027,459.214289785851,455.338778374894,277.540127516195,255.699538715189,126.751623161204,52.3267995932302,141.092102719369,21.7398366526258,16.3480536626463,11.5595126730318,19.4293148989614,16.8941868536394,6.2723764193627,83.1430967179971,104.814648385506,79.4945174084778,98.2284017138746,80.7032795320379,80.8456807710202,33.1246811618639,35.5533351576666,27.9273442904466,27.3628654713106,21.2320266906209,59.6039852133493,239.776480257281,219.694365815941,64.0160855767041,113.870088888741,103.315742770714,88.9263579260473,101.949409086656,80.4266184509923,104.069081416171,36.2944385868978,155.691457143178,69.0744449275437,71.5526519811675,69.822036451472,111.835056730873,84.9064311333487,59.6923114418347,42.6613282198348,9.82484020948546,5.99902730993408,7.75128385145695,485.022090392816,1137.34649860711,114.094151718481,1212.07698470074,1149.69669615717,488.925268848645,636.147992488678,53.8730234768173,101.516088017836,122.065092323465,120.162299711177,43.460227949543,50.3485608709306,75.806156648052,69.3242162044289,50.7552283668906,58.5479701701763,47.5067743517825,99.8595011052601,29.7483830247322,42.3597619575915,64.0462091956774,69.2658514471136,83.9702692661306,120.843501783192,127.790706709333,50.5547037718973,6.31991868581911,4.11756651383544,4.83077948972507,38.7325194641389,47.8433162361436,37.6329708453521,56.5819918048652,35.4175617145327,34.7101003996601,36.0427614363132,33.2659017735528,32.5775305204403,27.3169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|EntrezGene=18807
|HGNC=
|MCL_coexpression_id=799
|UniProt=D3Z179
|association_with_transcript=-29bp_to_ENSMUST00000150964_5end
|description=CAGE_peak_1_at_Pld3_5end
|id=chr7:28327793..28327828,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!7.75e-17!102;UBERON:0000924!7.75e-17!102;UBERON:0006601!7.75e-17!102;UBERON:0001049!4.80e-16!52;UBERON:0005068!4.80e-16!52;UBERON:0006241!4.80e-16!52;UBERON:0007135!4.80e-16!52;UBERON:0001017!9.51e-16!73;UBERON:0005743!9.51e-16!73;UBERON:0000073!1.02e-15!75;UBERON:0001016!1.02e-15!75;UBERON:0000955!2.26e-15!50;UBERON:0006238!2.26e-15!50;UBERON:0002616!6.83e-15!49;UBERON:0002346!3.25e-13!71;UBERON:0003075!3.25e-13!71;UBERON:0007284!3.25e-13!71;UBERON:0000033!6.71e-13!63;UBERON:0003080!2.92e-12!40;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0007811!2.03e-11!86;UBERON:0000153!2.64e-11!94;UBERON:0002020!7.85e-11!34;UBERON:0003056!4.48e-10!49;UBERON:0000475!4.22e-09!200;UBERON:0002791!8.57e-09!29;UBERON:0003528!8.57e-09!29;UBERON:0001893!8.57e-09!29;UBERON:0002021!6.42e-08!10;UBERON:0000411!6.42e-08!10;UBERON:0001950!6.42e-08!10;UBERON:0002619!9.62e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.98e-17,54;UBERON:0001049,4.80e-16,52;UBERON:0005068,4.80e-16,52;UBERON:0006241,4.80e-16,52;UBERON:0007135,4.80e-16,52;UBERON:0004121,7.66e-16,95;UBERON:0000924,7.66e-16,95;UBERON:0006601,7.66e-16,95;UBERON:0001017,9.51e-16,73;UBERON:0001016,1.02e-15,75;UBERON:0000955,7.96e-14,47;UBERON:0006238,7.96e-14,47;UBERON:0010371,2.12e-13,73;UBERON:0002616,2.34e-13,46;UBERON:0002346,1.95e-12,64;UBERON:0003075,1.95e-12,64;UBERON:0007284,1.95e-12,64;UBERON:0003080,2.92e-12,40;UBERON:0002780,1.00e-11,39;UBERON:0001890,1.00e-11,39;UBERON:0006240,1.00e-11,39;UBERON:0002020,7.85e-11,34;UBERON:0003056,4.48e-10,49;UBERON:0003528,8.57e-09,29;UBERON:0002791,8.57e-09,29;UBERON:0001893,8.57e-09,29;UBERON:0002021,6.42e-08,10;UBERON:0000411,6.42e-08,10;UBERON:0001950,6.42e-08,10;UBERON:0010314,1.60e-07,92;UBERON:0002619,9.62e-07,17
|phase1_expression=61.3370084411361,25.126229350034,31.8499467572675,2.41971369045464,4.50806156951712,21.9921846204576,34.5746708081378,92.8396695544933,105.169175447295,119.606972950539,29.9631444394634,15.2364823681093,104.946047447829,116.356555619686,99.2667090210675,101.237633694913,112.629462378632,60.7264668314608,66.2262714315718,62.8096684661085,176.805000224074,23.1347916298063,16.194386926614,44.4778935365671,46.5700840566355,31.5827580263261,47.3838195774982,47.6191424235815,11.0213583284697,9.57714493087737,35.2551511941934,28.5763803056834,20.2971379902908,0,5.77703239502549,5.31950865147176,4.69589519403449,16.3227335987394,7.813353445238,6.80580867165938,16.4704816648684,18.442228093878,11.6522484727477,141.633920222524,129.762471960979,150.141243268255,389.630889485324,93.750817243592,171.794594898357,160.793526534432,97.710522294503,102.06432069913,60.9050859989583,121.135477715895,212.74737485718,128.115199145902,167.622062364173,92.3053045176622,107.834673638166,148.117474196169,95.7085419294331,178.232223868363,144.065756970005,1515.43112390188,2088.48575774145,1806.04045219299,513.214989318027,344.643819873434,48.4230489480591,55.2174287776615,58.6806642170356,340.21032242493,356.040088014001,49.2413012844115,40.3509432986775,40.4456266108409,386.506742307854,396.086122740252,394.922397001802,128.457244249209,129.637990984614,119.289161857498,409.840642534027,459.214289785851,455.338778374894,277.540127516195,255.699538715189,126.751623161204,52.3267995932302,141.092102719369,21.7398366526258,16.3480536626463,11.5595126730318,19.4293148989614,16.8941868536394,6.2723764193627,83.1430967179971,104.814648385506,79.4945174084778,98.2284017138746,80.7032795320379,80.8456807710202,33.1246811618639,35.5533351576666,27.9273442904466,27.3628654713106,21.2320266906209,59.6039852133493,239.776480257281,219.694365815941,64.0160855767041,113.870088888741,103.315742770714,88.9263579260473,101.949409086656,80.4266184509923,104.069081416171,36.2944385868978,155.691457143178,69.0744449275437,71.5526519811675,69.822036451472,111.835056730873,84.9064311333487,59.6923114418347,42.6613282198348,9.82484020948546,5.99902730993408,7.75128385145695,485.022090392816,1137.34649860711,114.094151718481,1212.07698470074,1149.69669615717,488.925268848645,636.147992488678,53.8730234768173,101.516088017836,122.065092323465,120.162299711177,43.460227949543,50.3485608709306,75.806156648052,69.3242162044289,50.7552283668906,58.5479701701763,47.5067743517825,99.8595011052601,29.7483830247322,42.3597619575915,64.0462091956774,69.2658514471136,83.9702692661306,120.843501783192,127.790706709333,50.5547037718973,6.31991868581911,4.11756651383544,4.83077948972507,38.7325194641389,47.8433162361436,37.6329708453521,56.5819918048652,35.4175617145327,34.7101003996601,36.0427614363132,33.2659017735528,32.5775305204403,27.3169350856378,36.9376794177964,32.2653861992506,21.1989981766732,37.7626198300607,31.6727148274477,855.880090655998,120.81001493328,25.4422462897524,21.1560453330835,34.7659848372431,40.1769442318559,32.0879978692012,25.0087570532945,34.4685967959549,41.6594121186505,18.0321043386914,42.4923303187948,34.6842588144372,38.9954685200656,37.2381406397519,17.0775687644302,20.1008386383466,22.9012464242522,34.1402221715547,39.4157368503564,47.3372489826938,49.0799700107207,46.7425494073978,38.5747009396752,45.4038336552167,27.7507078201652,31.7137430239577,34.6746030620259,25.4949259294948,49.8866866091121,69.9750022603003,77.1277045480048,112.587367370619,131.923906384572,145.136735515409,118.530808629734,77.824908852017,54.6377212244282,35.9420516318386,69.5903572140101,51.4862160639025,25.5104666726583,24.0392534119362,30.8763853672555,98.1039439784671,31.26608294213,30.9633455239849,34.4582524123632,37.7851299744488,57.1196337876592,77.3641832879545,62.6379009623534,90.1673024287413,78.8414295149639,74.624831731704,68.82259218061,85.997120969216,100.965042889895,891.176488081099,572.188779377282,88.5175691434265,63.4654516500885,421.926950487917,336.866387265992,6.55739781506702,44.1824122607653,39.1230192076158,45.6813330827067,53.2095792400013,54.962823529087,59.2644473059168,43.876862272269,40.4810701674894,62.2504977351094,65.2224833611764,336.744739610054,113.552068166615,96.8676883949868,62.2228184730661,75.0614059525036,195.135353359745,57.5390107687306,39.3020624054176,66.3889880740761,118.711360938071,101.146163673552,54.2699415653264,73.4338133544561,65.239020244404,106.820424182306,206.620472806998,178.424489819363,879.355501662034,45.7355178839528,76.0629060642596,95.3799805890586,243.665481024484,361.018486826591,459.585414541724,968.198538184426,36.6087864579388,146.799625108627,179.951172812849,193.411574700356,108.988488019736,94.0881628879231,140.381876547688,169.393408536903,25.6503136234269,356.758281068221,161.302111473173,62.9479947287829,67.7811970173145,129.785866876232,81.8798424048941,118.964650067392,32.4658801288264,35.5476688902091,38.143192770021,443.921837377028,40.8073431719665,48.1867137090631,48.8184140514542,70.2536674608615,103.067130088196,134.459753345666,129.600618577327,234.009812133722,35.5145026819512,84.5021465798219,98.6462642697333,64.8901809830868,81.5710357953491,126.976625988663,112.627366072582,92.5879567689464,81.3285663815075,52.211958322424,68.2634332211378,88.1782041014922,114.923972496888,208.567339614598,39.9368674121623,37.9003431938213,39.6258510082275,55.3192489612518,77.8830910742558,77.8866512889398,87.4322000873497,85.6195495560292,86.3423119401148,112.522022612714,153.203788522891,121.515555991736,166.666462510917,95.0000307347736,37.2936401668429,30.3232835340028,33.2411540400875,55.4454134872387,244.174900561988,83.5171406658729,118.760082009802,153.481063834821,1304.57675644542,1341.38773918191,1318.23257642405,862.187415818281,1230.40820550807,1329.49325940587,1210.31534291563,1149.67003183143,1201.73366862611,1171.17382518262,10.4825221060018,71.8244772121856,63.1714341290296,82.8993905202883,39.8265008993166,36.4010146731028,81.1200556475896,80.3536723231687,77.9833679308111,71.0079165056271,87.703837762023,69.9803726542343,59.743281765785,65.4337057577764,63.0067094443078,60.4892987929504,59.332774883766,60.5734952256034,72.9392044421853,73.3050622269299,77.1455817867185,70.2804192390976,58.4168665370936,72.0918226496349,68.605738322776,65.5763211160493,61.8296548309971,74.1856586254717,66.1366034429347,74.0707798588215,69.6387556388902,59.5952118372159,61.7938875186231,60.5803049037127,82.9498427218908,141.642597690815,83.04572099812,93.2540374569615,91.627111060976,98.1631815081844,71.1834255354694
|short_description=p1@Pld3
}}

Revision as of 12:58, 14 September 2013

Short description:p1@Pld3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pld3_5end
Coexpression cluster:MCL_coexpression_mm9:799
Association with transcript: -29bp_to_ENSMUST00000150964_5end
EntrezGene:Pld3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pld3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G761.34
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I525.13
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I631.85
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I721.99
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I834.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E992.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7105.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2119.61
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E629.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F115.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4104.95
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8116.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A199.27
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3101.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5112.63
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A260.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A466.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A662.81
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3176.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H223.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D144.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D246.57
GP2+ M cell, pool1.CNhs13228.11845-124H931.58
GP2+ M cell, pool2.CNhs13231.11846-124I147.38
GP2+ M cell, pool3.CNhs13240.11847-124I247.62
Ileum epithelium, pool1.CNhs13199.10252-104B911.02
Ileum epithelium, pool2.CNhs13232.10253-104C19.58
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C835.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I328.58
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G816.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8141.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9129.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3150.14
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7389.63
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C293.75
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8171.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3160.79
Mouse Astrocytes, donor2.CNhs12078.11552-120C497.71
Mouse Astrocytes, donor3.CNhs12107.11633-122C4102.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A260.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9121.14
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1212.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1128.12
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1167.62
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C592.31
Mouse Granule cells, donor1.CNhs12131.11713-123C3107.83
Mouse Granule cells, donor2.CNhs12357.11731-123E3148.12
Mouse Granule cells, donor3.CNhs12108.11636-122C795.71
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6178.23
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1144.07
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71515.43
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72088.49
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21806.04
Mouse Microglia, donor1.CNhs12629.11718-123C8513.21
Mouse Microglia, donor2.CNhs12634.11736-123E8344.64
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D548.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F555.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D958.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1340.21
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5356.04
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D249.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F240.35
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D640.45
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3386.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3396.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7394.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4128.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4129.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8119.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4409.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5459.21
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6455.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6277.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6255.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1126.75
Mouse Schwann, donor1.CNhs12507.11728-123D952.33
Mouse Schwann, donor2.CNhs12573.11746-123F9141.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C819.43
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A783.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7104.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E379.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I898.23
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G680.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H180.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G127.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G227.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.23
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B659.60
accessory axillary lymph node, adult.CNhs10475.1063-29H9239.78
adrenal gland, adult.CNhs10508.49-24D7219.69
adrenal gland, embryo E14.CNhs11038.406-44C564.02
adrenal gland, embryo E16.CNhs11004.1254-43D6113.87
adrenal gland, embryo E17.CNhs11043.1263-45I1103.32
adrenal gland, embryo E18.CNhs11026.1262-18F588.93
adrenal gland, neonate N00.CNhs11191.1311-23C1101.95
adrenal gland, neonate N25.CNhs11223.1377-27I380.43
amnion, adult pregnant day17.5.CNhs10488.583-22A8104.07
aorta, adult.CNhs10498.46-23H136.29
bone (os femoris), adult.CNhs10483.56-12G2155.69
bone (os femoris), neonate N02.CNhs11227.1985-43F569.07
bone (os femoris), neonate N16.CNhs11225.1525-43A671.55
bone (os femoris), neonate N20.CNhs11195.1350-25C369.82
cecum, adult.CNhs10467.37-13H4111.84
cerebellum, adult.CNhs10494.15-8B284.91
cerebellum, neonate N30.CNhs11135.1395-42I259.69
colon, adult.CNhs10468.36-18H742.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C79.82
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.75
corpora quadrigemina, adult.CNhs10501.16-22A4485.02
corpus striatum, adult.CNhs10487.19-21D81137.35
corpus striatum, neonate N00.CNhs11226.630-43F1114.09
cortex, adult.CNhs10473.12-14D51212.08
cortex, neonate N30.CNhs11107.1392-42F21149.70
diencephalon, adult.CNhs10482.20-12F2488.93
diencephalon, neonate N30.CNhs11201.1388-42B2636.15
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B153.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2101.52
epididymis, adult.CNhs10490.58-23B2122.07
eyeball, adult.CNhs10484.31-12G4120.16
eyeball, embryo E12.CNhs11016.345-16C643.46
eyeball, embryo E14.CNhs10521.399-16E250.35
eyeball, embryo E15.CNhs10593.426-16C975.81
eyeball, embryo E17.CNhs11023.1261-18D469.32
eyeball, neonate N00.CNhs11207.633-15C650.76
eyeball, neonate N01.CNhs11140.1532-43E758.55
eyeball, neonate N02.CNhs11205.1551-44G847.51
eyeball, neonate N16.CNhs11188.777-19A299.86
forelimb, embryo E11.CNhs10596.335-25E229.75
forelimb, embryo E12.CNhs10600.359-14H242.36
forelimb, embryo E13.CNhs10589.384-1E264.05
forelimb, embryo E14.CNhs10577.413-26A869.27
forelimb, embryo E15.CNhs11007.437-20E783.97
forelimb, embryo E17.CNhs10598.1517-43C4120.84
forelimb, embryo E18.CNhs11008.1520-43B5127.79
gonad, embryo E13.CNhs11044.1564-45I650.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E938.73
heart, embryo E12.CNhs11015.353-12F547.84
heart, embryo E13.CNhs11013.376-3I937.63
heart, embryo E14.CNhs10597.403-26D456.58
heart, embryo E15.CNhs11017.431-16C835.42
heart, embryo E16.CNhs11021.457-17C634.71
heart, embryo E17.CNhs11025.479-18E536.04
heart, embryo E18.CNhs11030.1283-20G333.27
heart, neonate N00.CNhs11213.639-21E332.58
heart, neonate N03.CNhs11221.1349-25I227.32
heart, neonate N10.CNhs11118.749-24G136.94
heart, neonate N16.CNhs11209.782-15G132.27
heart, neonate N20.CNhs11127.821-26I621.20
heart, neonate N25.CNhs11196.1351-25D337.76
heart, neonate N30.CNhs11202.1390-42D231.67
hippocampus, adult.CNhs10478.13-16E8855.88
hippocampus, neonate N00.CNhs11228.627-43G1120.81
intestinal mucosa, adult.CNhs10506.860-29I325.44
intestine, adult.CNhs10496.178-9A321.16
intestine, embryo E12.CNhs11019.1251-16I534.77
intestine, embryo E13.CNhs11010.381-16D540.18
intestine, embryo E15.CNhs10602.976-16D832.09
intestine, embryo E16.CNhs10585.463-22H425.01
intestine, embryo E17.CNhs10582.482-18D334.47
intestine, embryo E18.CNhs10526.1289-20F741.66
intestine, neonate N00.CNhs11126.644-26D118.03
intestine, neonate N01.CNhs11192.1322-23E942.49
intestine, neonate N06.CNhs11102.688-20B834.68
intestine, neonate N07.CNhs11095.720-20F239.00
intestine, neonate N10.CNhs11098.755-23A537.24
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E320.10
intestine, neonate N30.CNhs11131.1384-42G122.90
kidney, embryo E14.CNhs10606.411-4I934.14
kidney, embryo E15.CNhs10997.434-16F839.42
kidney, embryo E16.CNhs10584.464-22A547.34
kidney, embryo E17.CNhs11028.483-18I249.08
kidney, embryo E18.CNhs11001.1288-20C746.74
kidney, neonate N00.CNhs11214.646-21G738.57
kidney, neonate N10.CNhs11206.758-6D545.40
kidney, neonate N20.CNhs11113.832-19I127.75
kidney, neonate N25.CNhs11122.1353-25F331.71
kidney, neonate N30.CNhs11203.1385-42H134.67
liver, adult pregnant day01.CNhs10466.508-5B225.49
liver, embryo E12.CNhs10601.355-15F849.89
liver, embryo E13.CNhs10524.378-3H669.98
liver, embryo E14.CNhs10594.409-16E177.13
liver, embryo E15.CNhs10520.433-16D7112.59
liver, embryo E16.CNhs10523.462-17F5131.92
liver, embryo E17.CNhs10510.481-18A3145.14
liver, embryo E18.CNhs10579.499-43G4118.53
liver, neonate N00.CNhs11117.641-24F477.82
liver, neonate N03.CNhs11123.1345-25G254.64
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H269.59
liver, neonate N10.CNhs11115.751-24B951.49
liver, neonate N20.CNhs11220.823-25A325.51
liver, neonate N25.CNhs11198.1368-26H124.04
liver, neonate N30.CNhs11106.1382-42D130.88
lung, adult.CNhs10474.28-22B198.10
lung, embryo E12.CNhs10522.354-16G231.27
lung, embryo E14.CNhs10604.404-26F830.96
lung, embryo E15.CNhs11020.432-17C534.46
lung, embryo E16.CNhs10998.458-17B637.79
lung, embryo E17.CNhs10605.480-44A657.12
lung, embryo E18.CNhs10583.1287-20I677.36
lung, neonate N00.CNhs11224.640-42C662.64
lung, neonate N06.CNhs11212.683-20E590.17
lung, neonate N07.CNhs11111.715-19A378.84
lung, neonate N10.CNhs11219.750-23E674.62
lung, neonate N20.CNhs11109.822-18A468.82
lung, neonate N25.CNhs11119.1359-25C786.00
lung, neonate N30.CNhs11133.1394-42H2100.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1891.18
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1572.19
mammary gland, adult lactating day02.CNhs10480.595-22B688.52
mammary gland, adult pregnant day19.CNhs10476.588-5H263.47
medulla oblongata, adult.CNhs10477.17-12C2421.93
medulla oblongata, neonate N30.CNhs11200.1396-42A3336.87
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C244.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E139.12
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E245.68
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E353.21
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D754.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D859.26
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D943.88
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D440.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D562.25
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D665.22
olfactory brain, adult.CNhs10489.18-22I9336.74
ovary, adult.CNhs10507.91-2I7113.55
ovary, embryo E18.CNhs11040.505-44H796.87
ovary, neonate N00.CNhs11217.1299-22I462.22
oviduct, adult pregnant day01.CNhs10500.988-6G675.06
pancreas, adult.CNhs10486.34-16E4195.14
pancreas, embryo E14.CNhs11012.405-44F457.54
pancreas, embryo E15.CNhs11042.1556-45F239.30
pancreas, embryo E16.CNhs11003.460-26E566.39
pancreas, embryo E17.CNhs10599.1558-45G3118.71
pancreas, embryo E18.CNhs10580.1535-43I7101.15
pancreas, neonate N00.CNhs11105.645-26G954.27
pancreas, neonate N01.CNhs11138.1531-43D773.43
pancreas, neonate N02.CNhs11139.1539-43D865.24
pancreas, neonate N16.CNhs11136.787-43B6106.82
pancreas, neonate N25.CNhs11094.1555-45E2206.62
pancreas, neonate N30.CNhs11182.1548-44H5178.42
pituitary gland, adult.CNhs10493.21-1G8879.36
pituitary gland, embryo E12.CNhs11018.346-16E645.74
pituitary gland, embryo E13.CNhs11009.370-44C776.06
pituitary gland, embryo E14.CNhs11037.398-44A595.38
pituitary gland, embryo E15.CNhs10592.427-16B9243.67
pituitary gland, embryo E16.CNhs11036.449-43F6361.02
pituitary gland, embryo E17.CNhs11039.1265-44F5459.59
pituitary gland, neonate N00.CNhs11190.1308-22E9968.20
placenta, adult pregnant day10.CNhs10472.539-13I736.61
placenta, adult pregnant day17.CNhs10464.577-18G3146.80
prostate, adult.CNhs10470.859-1F8179.95
skin, adult.CNhs10492.30-1C3193.41
skin, neonate N00.CNhs11124.650-25G4108.99
skin, neonate N03.CNhs11215.662-22H394.09
skin, neonate N06.CNhs11097.693-20I5140.38
skin, neonate N10.CNhs11108.762-6C4169.39
small intestine, neonate N16.CNhs11114.790-21I125.65
spinal cord, adult.CNhs10505.24-13C9356.76
spleen, adult.CNhs10465.25-2G2161.30
spleen, embryo E16.CNhs11035.461-43C162.95
spleen, embryo E18.CNhs11011.1271-21F267.78
spleen, neonate N10.CNhs11116.752-24D1129.79
spleen, neonate N20.CNhs11112.824-19H181.88
spleen, neonate N25.CNhs11099.1354-25G3118.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C632.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C935.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D338.14
stomach, adult.CNhs10503.33-1H6443.92
stomach, embryo E12.CNhs10588.356-43E340.81
stomach, embryo E15.CNhs10603.1252-16G848.19
stomach, embryo E16.CNhs11022.459-17D448.82
stomach, embryo E17.CNhs11006.1035-18D570.25
stomach, embryo E18.CNhs10999.1286-20C6103.07
stomach, neonate N03.CNhs11193.1340-24B8134.46
stomach, neonate N07.CNhs11210.718-18A9129.60
stomach, neonate N25.CNhs11104.1355-25E4234.01
stomach, neonate N30.CNhs11134.1386-42I135.51
submandibular gland, adult.CNhs10469.59-29C184.50
testis, adult.CNhs10504.57-7G598.65
testis, embryo E13.CNhs11031.389-23F564.89
testis, embryo E15.CNhs11034.443-27C581.57
testis, embryo E16.CNhs11033.470-26G5126.98
testis, embryo E17.CNhs11029.486-18I5112.63
testis, embryo E18.CNhs11027.503-18G592.59
testis, neonate N00.CNhs11189.1300-22B781.33
testis, neonate N07.CNhs11222.726-26I452.21
testis, neonate N10.CNhs11204.763-44D968.26
testis, neonate N20.CNhs11110.839-18H388.18
testis, neonate N30.CNhs11130.1391-42E2114.92
thymus, adult.CNhs10471.38-12B5208.57
thymus, embryo E14.CNhs11041.402-44I439.94
thymus, embryo E15.CNhs11005.430-45I237.90
thymus, embryo E16.CNhs11002.456-26C539.63
thymus, embryo E17.CNhs10581.478-18C155.32
thymus, embryo E18.CNhs10595.1273-19G477.88
thymus, neonate N02.CNhs11181.1541-43F877.89
thymus, neonate N03.CNhs11137.2104-43C787.43
thymus, neonate N06.CNhs11197.681-26C485.62
thymus, neonate N07.CNhs11211.713-19D386.34
thymus, neonate N10.CNhs11194.748-24E4112.52
thymus, neonate N20.CNhs11186.820-7A2153.20
thymus, neonate N25.CNhs11125.1362-25G7121.52
thymus, neonate N30.CNhs11132.1393-42G2166.67
tongue, adult.CNhs10499.32-1B495.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H337.29
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F730.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G533.24
urinary bladder, adult.CNhs10481.879-12E455.45
uterus, adult pregnant day19.CNhs10497.590-15F5244.17
uterus, adult.CNhs10509.92-27E583.52
vagina, adult.CNhs10502.89-27D5118.76
vesicular gland, adult.CNhs10491.51-27F8153.48
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11304.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21341.39
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31318.23
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7862.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41230.41
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51329.49
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61210.32
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71149.67
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81201.73
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91171.17
whole body, embryo E11.CNhs11014.324-5I810.48
whole body, embryo E12.CNhs10587.857-27C971.82
whole body, embryo E13.CNhs10512.372-23H263.17
whole body, embryo E14.5.CNhs10578.420-27D282.90
whole body, embryo E14.CNhs10519.395-14B139.83
whole body, embryo E16.CNhs10514.453-14F236.40
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G581.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G580.35
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G577.98
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G571.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G587.70
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G569.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G559.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G565.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G563.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G560.49
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G559.33
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G560.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G572.94
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G573.31
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G577.15
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G570.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G558.42
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G572.09
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G568.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G565.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G561.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G574.19
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G566.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G574.07
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G569.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G559.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G561.79
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G560.58
whole body, embryo E17.5.CNhs10513.490-9F982.95
whole body, embryo E17.CNhs10517.475-3I5141.64
whole body, embryo E18.CNhs10516.493-3B383.05
whole body, neonate N00.CNhs10525.657-19C293.25
whole body, neonate N01.CNhs10576.659-23C691.63
whole body, neonate N06.CNhs10515.692-21D198.16
whole body, neonate N10.CNhs10518.761-6B471.18





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.98e-1754
neural tube4.80e-1652
neural rod4.80e-1652
future spinal cord4.80e-1652
neural keel4.80e-1652
ectoderm-derived structure7.66e-1695
ectoderm7.66e-1695
presumptive ectoderm7.66e-1695
central nervous system9.51e-1673
nervous system1.02e-1575
brain7.96e-1447
future brain7.96e-1447
ecto-epithelium2.12e-1373
regional part of brain2.34e-1346
neurectoderm1.95e-1264
neural plate1.95e-1264
presumptive neural plate1.95e-1264
anterior neural tube2.92e-1240
regional part of forebrain1.00e-1139
forebrain1.00e-1139
future forebrain1.00e-1139
gray matter7.85e-1134
pre-chordal neural plate4.48e-1049
brain grey matter8.57e-0929
regional part of telencephalon8.57e-0929
telencephalon8.57e-0929
occipital lobe6.42e-0810
visual cortex6.42e-0810
neocortex6.42e-0810
structure with developmental contribution from neural crest1.60e-0792
regional part of cerebral cortex9.62e-0717







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