FFCP PHASE1:Mm9::chr10:107851541..107851547,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:107851541..107851547,+|id=chr10:107851541..107851547,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,3.87e-10,3;CL:0002202,3.87e-10,3;CL:0000069,3.87e-10,3;CL:0002632,3.87e-10,3;CL:0002368,3.87e-10,3;CL:0000307,3.87e-10,3;CL:0000377,3.87e-10,3;CL:0000192,6.22e-10,3;CL:0000359,6.22e-10,3;CL:0002539,6.22e-10,3;CL:0000514,6.22e-10,3;CL:0000680,5.03e-08,6;CL:0000187,5.03e-08,6;CL:0000056,5.03e-08,6;CL:0000222,7.06e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.23e-08!59;UBERON:0004119!2.55e-08!130;UBERON:0000925!2.55e-08!130;UBERON:0006595!2.55e-08!130;UBERON:0001007!7.36e-08!128;UBERON:0001555!7.36e-08!128;UBERON:0007026!7.36e-08!128;UBERON:0000464!3.81e-07!57;UBERON:0004921!4.83e-07!126;UBERON:0004185!4.83e-07!126;UBERON:0000160!9.68e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.87e-10,3;UBERON:0001005,3.87e-10,3;UBERON:0007196,3.87e-10,3;UBERON:0001558,3.87e-10,3;UBERON:0001135,6.22e-10,3;UBERON:0004237,6.22e-10,3;UBERON:0004695,6.22e-10,3;UBERON:0002111,6.22e-10,3;UBERON:0004178,6.22e-10,3;UBERON:0000331,6.14e-09,3;UBERON:0002116,6.14e-09,3;UBERON:0001204,6.14e-09,3;UBERON:0001168,6.14e-09,3;UBERON:0000344,1.68e-08,15;UBERON:0000947,1.55e-07,4;UBERON:0001637,1.55e-07,4;UBERON:0004573,1.55e-07,4;UBERON:0003509,1.55e-07,4;UBERON:0004571,1.55e-07,4;UBERON:0010191,1.55e-07,4;UBERON:0004572,1.55e-07,4;UBERON:0002108,8.38e-07,4;UBERON:0001962,9.20e-07,2;UBERON:0001961,9.20e-07,2;UBERON:0001744,9.20e-07,2|phase1_expression=2.08193501236232,0,0.909998478779072,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.43993180514066,1.83527424853736,0.57423196411502,1.29228598847722,0.430942465371778,2.28028103347649,1.00812051903972,1.33038306393183,0,0,0,0.577703239502549,1.82858109894342,1.63335485009895,0,0,0,0,0,0,3.27331726736501,4.76471576731718,1.46837401729345,0,0.218025156380447,0,1.1665793944457,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,1.53387290320252,0.779358013808606,0.70667914902068,0.845060518660083,0,0,0,2.81438353314578,2.02687892380079,7.07734223020697,0.91347103775248,0,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0.459804208866946,0,0.30140963567143,0.340182495756639,0.2562274405697,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0.720248245844059,0,0.393528463494808,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0,0,0.264450566663544,1.06644125267617,0,0,0.201683524623343,0,0.190225626112559,0,0.988193728344065,1.75934646160189,0.397912944082302,0.38992817423824,0,0.864552199498777,1.1948476395262,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.350679099451593,0.379419222745544,0.590440591918409,0.784993639206874,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.763877555344259,0,0.324270453550071,0.549122826376163,2.87536413054709,0.372140947668503,0,0,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0,0.655453258862952,0.345369963731791,0.867894351489069,0,0,1.47529281905711,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.488660878060728,0,0,0.242780636154981,1.209294227859,0.377210159511796,0.295301892880773,0,0.516856586336442,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,0,0,0.36012218806262,0.388076051348264,0,0,0,0.164549020602121,0,0.23467170806371,0.63549621259146,0.441056796109924,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,0.291480836629851,0,0,0,0.370389054739423,0,0,0.228778173206523,0,0,0,3.81868247206045,0.316335993581135,0.203319467126849,0.540026704109006,0.418176592028937,0.655087691238533,0.269728692769641,0.0826534557253359,1.04702376793612,1.16653475962614,0.621339313086926,0,0,0.992750942742586,0.583353565032143,1.03327858782185,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.608175645870493,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0.443971906748129,0.448569283047378,0.167884616364078,0.772758376128762,0,0,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.3858184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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:107851541..107851547,+ | |||
|id=chr10:107851541..107851547,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.87e-10,3;CL:0002202,3.87e-10,3;CL:0000069,3.87e-10,3;CL:0002632,3.87e-10,3;CL:0002368,3.87e-10,3;CL:0000307,3.87e-10,3;CL:0000377,3.87e-10,3;CL:0000192,6.22e-10,3;CL:0000359,6.22e-10,3;CL:0002539,6.22e-10,3;CL:0000514,6.22e-10,3;CL:0000680,5.03e-08,6;CL:0000187,5.03e-08,6;CL:0000056,5.03e-08,6;CL:0000222,7.06e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.23e-08!59;UBERON:0004119!2.55e-08!130;UBERON:0000925!2.55e-08!130;UBERON:0006595!2.55e-08!130;UBERON:0001007!7.36e-08!128;UBERON:0001555!7.36e-08!128;UBERON:0007026!7.36e-08!128;UBERON:0000464!3.81e-07!57;UBERON:0004921!4.83e-07!126;UBERON:0004185!4.83e-07!126;UBERON:0000160!9.68e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.87e-10,3;UBERON:0001005,3.87e-10,3;UBERON:0007196,3.87e-10,3;UBERON:0001558,3.87e-10,3;UBERON:0001135,6.22e-10,3;UBERON:0004237,6.22e-10,3;UBERON:0004695,6.22e-10,3;UBERON:0002111,6.22e-10,3;UBERON:0004178,6.22e-10,3;UBERON:0000331,6.14e-09,3;UBERON:0002116,6.14e-09,3;UBERON:0001204,6.14e-09,3;UBERON:0001168,6.14e-09,3;UBERON:0000344,1.68e-08,15;UBERON:0000947,1.55e-07,4;UBERON:0001637,1.55e-07,4;UBERON:0004573,1.55e-07,4;UBERON:0003509,1.55e-07,4;UBERON:0004571,1.55e-07,4;UBERON:0010191,1.55e-07,4;UBERON:0004572,1.55e-07,4;UBERON:0002108,8.38e-07,4;UBERON:0001962,9.20e-07,2;UBERON:0001961,9.20e-07,2;UBERON:0001744,9.20e-07,2 | |||
|phase1_expression=2.08193501236232,0,0.909998478779072,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,1.43993180514066,1.83527424853736,0.57423196411502,1.29228598847722,0.430942465371778,2.28028103347649,1.00812051903972,1.33038306393183,0,0,0,0.577703239502549,1.82858109894342,1.63335485009895,0,0,0,0,0,0,3.27331726736501,4.76471576731718,1.46837401729345,0,0.218025156380447,0,1.1665793944457,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,1.53387290320252,0.779358013808606,0.70667914902068,0.845060518660083,0,0,0,2.81438353314578,2.02687892380079,7.07734223020697,0.91347103775248,0,0,0.520455980298408,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.484875253135222,1.86391761218122,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0.459804208866946,0,0.30140963567143,0.340182495756639,0.2562274405697,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0.205782136407943,0.995171334092466,0,0,0,0,0.234526059981096,0.720248245844059,0,0.393528463494808,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0,0,0.264450566663544,1.06644125267617,0,0,0.201683524623343,0,0.190225626112559,0,0.988193728344065,1.75934646160189,0.397912944082302,0.38992817423824,0,0.864552199498777,1.1948476395262,0,0.456994050438915,0,0.203651327845314,0.387904974335251,0.350679099451593,0.379419222745544,0.590440591918409,0.784993639206874,0.493588655687202,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0.763877555344259,0,0.324270453550071,0.549122826376163,2.87536413054709,0.372140947668503,0,0,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.157635144106191,0,0,0.655453258862952,0.345369963731791,0.867894351489069,0,0,1.47529281905711,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.488660878060728,0,0,0.242780636154981,1.209294227859,0.377210159511796,0.295301892880773,0,0.516856586336442,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,0,0,0.36012218806262,0.388076051348264,0,0,0,0.164549020602121,0,0.23467170806371,0.63549621259146,0.441056796109924,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,0.291480836629851,0,0,0,0.370389054739423,0,0,0.228778173206523,0,0,0,3.81868247206045,0.316335993581135,0.203319467126849,0.540026704109006,0.418176592028937,0.655087691238533,0.269728692769641,0.0826534557253359,1.04702376793612,1.16653475962614,0.621339313086926,0,0,0.992750942742586,0.583353565032143,1.03327858782185,0.337912250981556,0.234714477291508,0.5208175393758,0.104859344425711,0.241584120826006,0,0,0.608175645870493,0.102710957164827,0.129920822977795,0,0,0.240390899039938,0,0,0,0,0,0.192423683280659,0.116876902181569,0,0.443971906748129,0.448569283047378,0.167884616364078,0.772758376128762,0,0,0.643105137237198,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0.341467211508268,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0.789209134313529,0.407412341537585,1.12228454331548,0,0,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr10:107851541..107851547,+ | |||
}} |
Revision as of 15:40, 12 September 2013
Short description: | p@chr10:107851541..107851547, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:107851541..107851547, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.87e-10 | 3 |
epithelial cell of tracheobronchial tree | 3.87e-10 | 3 |
branched duct epithelial cell | 3.87e-10 | 3 |
epithelial cell of lower respiratory tract | 3.87e-10 | 3 |
respiratory epithelial cell | 3.87e-10 | 3 |
tracheal epithelial cell | 3.87e-10 | 3 |
tracheoblast | 3.87e-10 | 3 |
smooth muscle cell | 6.22e-10 | 3 |
vascular associated smooth muscle cell | 6.22e-10 | 3 |
aortic smooth muscle cell | 6.22e-10 | 3 |
smooth muscle myoblast | 6.22e-10 | 3 |
muscle precursor cell | 5.03e-08 | 6 |
muscle cell | 5.03e-08 | 6 |
myoblast | 5.03e-08 | 6 |
mesodermal cell | 7.06e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.87e-10 | 3 |
respiratory airway | 3.87e-10 | 3 |
tracheobronchial tree | 3.87e-10 | 3 |
lower respiratory tract | 3.87e-10 | 3 |
smooth muscle tissue | 6.22e-10 | 3 |
blood vessel smooth muscle | 6.22e-10 | 3 |
arterial system smooth muscle | 6.22e-10 | 3 |
artery smooth muscle tissue | 6.22e-10 | 3 |
aorta smooth muscle tissue | 6.22e-10 | 3 |
ileal mucosa | 6.14e-09 | 3 |
ileum | 6.14e-09 | 3 |
mucosa of small intestine | 6.14e-09 | 3 |
wall of small intestine | 6.14e-09 | 3 |
mucosa | 1.68e-08 | 15 |
aorta | 1.55e-07 | 4 |
artery | 1.55e-07 | 4 |
systemic artery | 1.55e-07 | 4 |
arterial blood vessel | 1.55e-07 | 4 |
systemic arterial system | 1.55e-07 | 4 |
aortic system | 1.55e-07 | 4 |
arterial system | 1.55e-07 | 4 |
small intestine | 8.38e-07 | 4 |
gut-associated lymphoid tissue | 9.20e-07 | 2 |
mucosa-associated lymphoid tissue | 9.20e-07 | 2 |
lymphoid tissue | 9.20e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.