FFCP PHASE1:Mm9::chr1:57028111..57028122,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=212712|HGNC=|MCL_coexpression_id=76|UniProt=Q546B3,Q8VI24|association_with_transcript=55bp_to_NM_139146,uc007bas.1,uc011wlc.1_5end|description=CAGE_peak_9_at_Satb2_5end|id=chr1:57028111..57028122,-|ontology_enrichment_celltype=CL:0002609!6.43e-09!6|ontology_enrichment_celltype_v019_2=CL:0002609,5.08e-45,6;CL:0002608,5.59e-23,3;CL:0000117,1.20e-11,23;CL:0000337,1.20e-11,23;CL:0000540,4.91e-08,33;CL:0000047,4.91e-08,33;CL:0000031,4.91e-08,33;CL:0000404,4.91e-08,33;CL:0000393,9.48e-07,39;CL:0000211,9.48e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!8.08e-19!21;UBERON:0001869!8.08e-19!21;UBERON:0000203!8.08e-19!21;UBERON:0002791!9.80e-18!29;UBERON:0003528!9.80e-18!29;UBERON:0001893!9.80e-18!29;UBERON:0002020!4.35e-15!34;UBERON:0002619!3.89e-14!17;UBERON:0002021!2.95e-12!10;UBERON:0000411!2.95e-12!10;UBERON:0001950!2.95e-12!10;UBERON:0002780!3.88e-12!39;UBERON:0001890!3.88e-12!39;UBERON:0006240!3.88e-12!39;UBERON:0003080!1.23e-11!40;UBERON:0002616!4.02e-08!49;UBERON:0003056!4.02e-08!49;UBERON:0001049!6.69e-08!52;UBERON:0005068!6.69e-08!52;UBERON:0006241!6.69e-08!52;UBERON:0007135!6.69e-08!52;UBERON:0000955!8.11e-08!50;UBERON:0006238!8.11e-08!50|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.77e-41,21;UBERON:0001869,1.77e-41,21;UBERON:0000203,1.77e-41,21;UBERON:0003528,7.51e-30,29;UBERON:0002791,7.51e-30,29;UBERON:0001893,7.51e-30,29;UBERON:0002619,9.98e-27,17;UBERON:0002020,2.36e-25,34;UBERON:0002780,5.28e-22,39;UBERON:0001890,5.28e-22,39;UBERON:0006240,5.28e-22,39;UBERON:0003080,1.96e-21,40;UBERON:0002616,1.57e-18,46;UBERON:0000955,4.04e-18,47;UBERON:0006238,4.04e-18,47;UBERON:0002021,6.32e-18,10;UBERON:0000411,6.32e-18,10;UBERON:0001950,6.32e-18,10;UBERON:0003056,2.40e-17,49;UBERON:0001049,2.70e-16,52;UBERON:0005068,2.70e-16,52;UBERON:0006241,2.70e-16,52;UBERON:0007135,2.70e-16,52;UBERON:0000073,1.17e-15,54;UBERON:0002346,4.52e-13,64;UBERON:0003075,4.52e-13,64;UBERON:0007284,4.52e-13,64;UBERON:0010371,2.42e-11,73;UBERON:0001017,2.42e-11,73;UBERON:0001016,5.15e-11,75;UBERON:0001954,3.25e-10,7;UBERON:0003022,3.25e-10,7;UBERON:0002421,3.25e-10,7;UBERON:0000349,3.25e-10,7;UBERON:0002600,3.25e-10,7;UBERON:0010314,8.59e-09,92;UBERON:0004121,1.76e-08,95;UBERON:0000924,1.76e-08,95;UBERON:0006601,1.76e-08,95;UBERON:0000025,6.92e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46565208621039,8.10035629990144,7.36137364729837,0,0,2.32732518508413,2.68367318851062,2.75765635983006,0,0,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,1.10420759230197,0.969750506270444,0,0,0,0,0,0,0,0,0,0.376963056338593,0.521472960576829,0.255715457330331,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0.407302655690628,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.62799699626633,0.503653849092235,0,0,0,0,0,1.6942555278512,1.84130094602871,0.572895513439397,0.515559547031063,0.685082519770642,2.2661816921691,1.35004500046361,0.45032120322422,0.906284817968409,1.03552062350364,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.468207537349412,0.512201219238954,0.631790158511746,0,0.347652977834566,0.578727661391115,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0.578719832943424,0.999242311751784,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p9@Satb2}} | ||
|EntrezGene=212712 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=Q546B3,Q8VI24 | |||
|association_with_transcript=55bp_to_NM_139146,uc007bas.1,uc011wlc.1_5end | |||
|description=CAGE_peak_9_at_Satb2_5end | |||
|id=chr1:57028111..57028122,- | |||
|ontology_enrichment_celltype=CL:0002609!6.43e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.08e-45,6;CL:0002608,5.59e-23,3;CL:0000117,1.20e-11,23;CL:0000337,1.20e-11,23;CL:0000540,4.91e-08,33;CL:0000047,4.91e-08,33;CL:0000031,4.91e-08,33;CL:0000404,4.91e-08,33;CL:0000393,9.48e-07,39;CL:0000211,9.48e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!8.08e-19!21;UBERON:0001869!8.08e-19!21;UBERON:0000203!8.08e-19!21;UBERON:0002791!9.80e-18!29;UBERON:0003528!9.80e-18!29;UBERON:0001893!9.80e-18!29;UBERON:0002020!4.35e-15!34;UBERON:0002619!3.89e-14!17;UBERON:0002021!2.95e-12!10;UBERON:0000411!2.95e-12!10;UBERON:0001950!2.95e-12!10;UBERON:0002780!3.88e-12!39;UBERON:0001890!3.88e-12!39;UBERON:0006240!3.88e-12!39;UBERON:0003080!1.23e-11!40;UBERON:0002616!4.02e-08!49;UBERON:0003056!4.02e-08!49;UBERON:0001049!6.69e-08!52;UBERON:0005068!6.69e-08!52;UBERON:0006241!6.69e-08!52;UBERON:0007135!6.69e-08!52;UBERON:0000955!8.11e-08!50;UBERON:0006238!8.11e-08!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.77e-41,21;UBERON:0001869,1.77e-41,21;UBERON:0000203,1.77e-41,21;UBERON:0003528,7.51e-30,29;UBERON:0002791,7.51e-30,29;UBERON:0001893,7.51e-30,29;UBERON:0002619,9.98e-27,17;UBERON:0002020,2.36e-25,34;UBERON:0002780,5.28e-22,39;UBERON:0001890,5.28e-22,39;UBERON:0006240,5.28e-22,39;UBERON:0003080,1.96e-21,40;UBERON:0002616,1.57e-18,46;UBERON:0000955,4.04e-18,47;UBERON:0006238,4.04e-18,47;UBERON:0002021,6.32e-18,10;UBERON:0000411,6.32e-18,10;UBERON:0001950,6.32e-18,10;UBERON:0003056,2.40e-17,49;UBERON:0001049,2.70e-16,52;UBERON:0005068,2.70e-16,52;UBERON:0006241,2.70e-16,52;UBERON:0007135,2.70e-16,52;UBERON:0000073,1.17e-15,54;UBERON:0002346,4.52e-13,64;UBERON:0003075,4.52e-13,64;UBERON:0007284,4.52e-13,64;UBERON:0010371,2.42e-11,73;UBERON:0001017,2.42e-11,73;UBERON:0001016,5.15e-11,75;UBERON:0001954,3.25e-10,7;UBERON:0003022,3.25e-10,7;UBERON:0002421,3.25e-10,7;UBERON:0000349,3.25e-10,7;UBERON:0002600,3.25e-10,7;UBERON:0010314,8.59e-09,92;UBERON:0004121,1.76e-08,95;UBERON:0000924,1.76e-08,95;UBERON:0006601,1.76e-08,95;UBERON:0000025,6.92e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46565208621039,8.10035629990144,7.36137364729837,0,0,2.32732518508413,2.68367318851062,2.75765635983006,0,0,0,0.395658863190582,0.0914876436024097,0.52091337055676,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,1.10420759230197,0.969750506270444,0,0,0,0,0,0,0,0,0,0.376963056338593,0.521472960576829,0.255715457330331,0,0,0,0.622034853050465,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0.407302655690628,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.62799699626633,0.503653849092235,0,0,0,0,0,1.6942555278512,1.84130094602871,0.572895513439397,0.515559547031063,0.685082519770642,2.2661816921691,1.35004500046361,0.45032120322422,0.906284817968409,1.03552062350364,0.103787347584177,0,0,0,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.50695859978048,0.377252682772152,0.468207537349412,0.512201219238954,0.631790158511746,0,0.347652977834566,0.578727661391115,0,0.441596760403192,0.342869252385415,0,0.238436189947321,0.145346416632329,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0.578719832943424,0.999242311751784,0.233931608445408,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p9@Satb2 | |||
}} |
Revision as of 20:34, 13 September 2013
Short description: | p9@Satb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Satb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 55bp_to_NM_139146, uc007bas.1, uc011wlc.1_5end |
EntrezGene: | Satb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.08e-45 | 6 |
hippocampal neuron | 5.59e-23 | 3 |
CNS neuron (sensu Vertebrata) | 1.20e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.20e-11 | 23 |
neuron | 4.91e-08 | 33 |
neuronal stem cell | 4.91e-08 | 33 |
neuroblast | 4.91e-08 | 33 |
electrically signaling cell | 4.91e-08 | 33 |
electrically responsive cell | 9.48e-07 | 39 |
electrically active cell | 9.48e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.