FFCP PHASE1:Mm9::chr10:98906333..98906367,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=3|UniProt=E9PVQ5|association_with_transcript=0bp_to_ENSMUST00000167243_5end|description=CAGE_peak_1_at_ENSMUST00000167243_5end|id=chr10:98906333..98906367,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,4.11e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.98e-23,3;DOID:4045,3.98e-23,3;DOID:0050686,6.82e-12,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.89e-08,1;UBERON:0001097,2.89e-08,1;UBERON:0003968,2.89e-08,1;UBERON:0001467,2.89e-08,1;UBERON:0001134,4.11e-08,9;UBERON:0002036,4.11e-08,9;UBERON:0002385,4.11e-08,9;UBERON:0000486,4.11e-08,9;UBERON:0007503,4.11e-08,9;UBERON:0001015,4.11e-08,9;UBERON:0002329,4.11e-08,9;UBERON:0003082,4.11e-08,9;UBERON:0003059,4.11e-08,9;UBERON:0007282,4.11e-08,9;UBERON:0004290,4.11e-08,9;UBERON:0009618,4.11e-08,9;UBERON:0000383,2.37e-07,10;UBERON:0007524,9.96e-07,11;UBERON:0003077,9.96e-07,11;UBERON:0007285,9.96e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184866143295,0.685572168028694,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,4.6880120671428,6.80580867165938,14.7057872007754,12.294818729252,5.82612423637384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,1.10851914099963,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0.8858587585951,0,0.81931657357869,0.518054945597687,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0.854354403989263,1.65109494370578,1.66675074632741,0.188368457004691,0.410082683163076,0,0,0,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0.463735671240843|short_description=p1@ENSMUST00000167243}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=E9PVQ5 | |||
|association_with_transcript=0bp_to_ENSMUST00000167243_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000167243_5end | |||
|id=chr10:98906333..98906367,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,4.11e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.98e-23,3;DOID:4045,3.98e-23,3;DOID:0050686,6.82e-12,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.89e-08,1;UBERON:0001097,2.89e-08,1;UBERON:0003968,2.89e-08,1;UBERON:0001467,2.89e-08,1;UBERON:0001134,4.11e-08,9;UBERON:0002036,4.11e-08,9;UBERON:0002385,4.11e-08,9;UBERON:0000486,4.11e-08,9;UBERON:0007503,4.11e-08,9;UBERON:0001015,4.11e-08,9;UBERON:0002329,4.11e-08,9;UBERON:0003082,4.11e-08,9;UBERON:0003059,4.11e-08,9;UBERON:0007282,4.11e-08,9;UBERON:0004290,4.11e-08,9;UBERON:0009618,4.11e-08,9;UBERON:0000383,2.37e-07,10;UBERON:0007524,9.96e-07,11;UBERON:0003077,9.96e-07,11;UBERON:0007285,9.96e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184866143295,0.685572168028694,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8818223991596,4.6880120671428,6.80580867165938,14.7057872007754,12.294818729252,5.82612423637384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0.304465478312141,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0.179397413521912,0,1.10851914099963,0,0,0,0,0,0.476087281772027,0.195133647857799,0,0.8858587585951,0,0.81931657357869,0.518054945597687,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0.854354403989263,1.65109494370578,1.66675074632741,0.188368457004691,0.410082683163076,0,0,0,0.138199973804424,0,0,0.203319467126849,0.216010681643603,0,0,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0,0,0.409231043169689,0.154936841185966,0,0,0.233931608445408,0,0,0,0.463735671240843 | |||
|short_description=p1@ENSMUST00000167243 | |||
}} |
Revision as of 18:08, 12 September 2013
Short description: | p1@ENSMUST00000167243 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000167243_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000167243_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 4.11e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.89e-08 | 1 |
axillary lymph node | 2.89e-08 | 1 |
peripheral lymph node | 2.89e-08 | 1 |
shoulder | 2.89e-08 | 1 |
skeletal muscle tissue | 4.11e-08 | 9 |
striated muscle tissue | 4.11e-08 | 9 |
muscle tissue | 4.11e-08 | 9 |
multilaminar epithelium | 4.11e-08 | 9 |
epithelial vesicle | 4.11e-08 | 9 |
musculature | 4.11e-08 | 9 |
somite | 4.11e-08 | 9 |
myotome | 4.11e-08 | 9 |
presomitic mesoderm | 4.11e-08 | 9 |
presumptive segmental plate | 4.11e-08 | 9 |
dermomyotome | 4.11e-08 | 9 |
trunk paraxial mesoderm | 4.11e-08 | 9 |
musculature of body | 2.37e-07 | 10 |
dense mesenchyme tissue | 9.96e-07 | 11 |
paraxial mesoderm | 9.96e-07 | 11 |
presumptive paraxial mesoderm | 9.96e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.98e-23 | 3 |
muscle cancer | 3.98e-23 | 3 |
organ system cancer | 6.82e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.