FFCP PHASE1:Mm9::chr1:175843079..175843092,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=381308|HGNC=|MCL_coexpression_id=2884|UniProt=Q08619|association_with_transcript=-26bp_to_ENSMUST00000009340,NM_001033450_5end|description=CAGE_peak_3_at_Mnda_5end|id=chr1:175843079..175843092,-|ontology_enrichment_celltype=CL:0000222!9.09e-08!7;CL:0000680!4.09e-07!6;CL:0000183!4.09e-07!6;CL:0000187!4.09e-07!6;CL:0000056!4.09e-07!6|ontology_enrichment_celltype_v019_2=CL:0000680,5.43e-22,6;CL:0000187,5.43e-22,6;CL:0000056,5.43e-22,6;CL:0000222,8.90e-19,7;CL:0000355,1.74e-14,9;CL:0002494,2.49e-12,3;CL:0000737,2.49e-12,3;CL:0000746,2.49e-12,3;CL:0000513,2.49e-12,3;CL:0000192,2.57e-11,3;CL:0000359,2.57e-11,3;CL:0002539,2.57e-11,3;CL:0000514,2.57e-11,3;CL:0002476,5.87e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!1.70e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0000383,3.75e-17,10;UBERON:0001134,1.74e-14,9;UBERON:0002036,1.74e-14,9;UBERON:0002385,1.74e-14,9;UBERON:0000486,1.74e-14,9;UBERON:0007503,1.74e-14,9;UBERON:0001015,1.74e-14,9;UBERON:0002329,1.74e-14,9;UBERON:0003082,1.74e-14,9;UBERON:0003059,1.74e-14,9;UBERON:0007282,1.74e-14,9;UBERON:0004290,1.74e-14,9;UBERON:0009618,1.74e-14,9;UBERON:0000947,2.65e-14,4;UBERON:0001637,2.65e-14,4;UBERON:0004573,2.65e-14,4;UBERON:0003509,2.65e-14,4;UBERON:0004571,2.65e-14,4;UBERON:0010191,2.65e-14,4;UBERON:0004572,2.65e-14,4;UBERON:0002204,4.73e-12,32;UBERON:0007524,9.51e-12,11;UBERON:0003077,9.51e-12,11;UBERON:0007285,9.51e-12,11;UBERON:0000055,1.79e-11,5;UBERON:0007500,1.79e-11,5;UBERON:0001981,1.79e-11,5;UBERON:0002049,1.79e-11,5;UBERON:0007798,1.79e-11,5;UBERON:0004537,1.79e-11,5;UBERON:0006965,1.79e-11,5;UBERON:0001135,2.57e-11,3;UBERON:0004237,2.57e-11,3;UBERON:0004695,2.57e-11,3;UBERON:0002111,2.57e-11,3;UBERON:0004178,2.57e-11,3;UBERON:0004535,5.24e-07,23;UBERON:0001009,5.24e-07,23|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,2.64383317748712,1.31790010585369,1.83546752161682,0.782391344348039,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0,4.88792928468299,5.15760191889762,15.4701627683233,0,0,0,0,0.889294796111139,0.899899717281399,1.97773272513395,1.4209602298922,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,1.66257432234928,0.579728977403356,0,0,0,0,0,0.983110940922263,5.45377032249785,3.37721805983729,1.41335829804136,0,5.13305909657271,2.54805239706646,0,0,0,0,0.79928715803342,1.03575153458869,0.593768556259299,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0.247194967734374,1.3013942122792,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0.509196819251581,0.497627882440372,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.292399974850665,0.878200461164203,0.268412837520744,0.210289948564127,0.102904612379284,0,0.528901133327089,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0.345369963731791,0,12.0633027151418,15.2293591469239,0.491764273019036,0.551873492609465,0,0.117211686592203,7.70494243270374,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0.441056796109924,1.6488625294148,0.484393280087717,0.301564624640779,0,0.164140899745061,0,0,0,0,0.740778109478847,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.308132871494482,0.77952493786677,0.179026695667481,0.596044064343795,0,0,0.100966449948148,0.15241361331,0.302478555410522,0.292373642219257,0.481059208201647,0,0.453460767230423,0,0,0,0.386379188064381,1.12609485270709,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p3@Mnda}} | ||
|EntrezGene=381308 | |||
|HGNC= | |||
|MCL_coexpression_id=2884 | |||
|UniProt=Q08619 | |||
|association_with_transcript=-26bp_to_ENSMUST00000009340,NM_001033450_5end | |||
|description=CAGE_peak_3_at_Mnda_5end | |||
|id=chr1:175843079..175843092,- | |||
|ontology_enrichment_celltype=CL:0000222!9.09e-08!7;CL:0000680!4.09e-07!6;CL:0000183!4.09e-07!6;CL:0000187!4.09e-07!6;CL:0000056!4.09e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.43e-22,6;CL:0000187,5.43e-22,6;CL:0000056,5.43e-22,6;CL:0000222,8.90e-19,7;CL:0000355,1.74e-14,9;CL:0002494,2.49e-12,3;CL:0000737,2.49e-12,3;CL:0000746,2.49e-12,3;CL:0000513,2.49e-12,3;CL:0000192,2.57e-11,3;CL:0000359,2.57e-11,3;CL:0002539,2.57e-11,3;CL:0000514,2.57e-11,3;CL:0002476,5.87e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.70e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,3.75e-17,10;UBERON:0001134,1.74e-14,9;UBERON:0002036,1.74e-14,9;UBERON:0002385,1.74e-14,9;UBERON:0000486,1.74e-14,9;UBERON:0007503,1.74e-14,9;UBERON:0001015,1.74e-14,9;UBERON:0002329,1.74e-14,9;UBERON:0003082,1.74e-14,9;UBERON:0003059,1.74e-14,9;UBERON:0007282,1.74e-14,9;UBERON:0004290,1.74e-14,9;UBERON:0009618,1.74e-14,9;UBERON:0000947,2.65e-14,4;UBERON:0001637,2.65e-14,4;UBERON:0004573,2.65e-14,4;UBERON:0003509,2.65e-14,4;UBERON:0004571,2.65e-14,4;UBERON:0010191,2.65e-14,4;UBERON:0004572,2.65e-14,4;UBERON:0002204,4.73e-12,32;UBERON:0007524,9.51e-12,11;UBERON:0003077,9.51e-12,11;UBERON:0007285,9.51e-12,11;UBERON:0000055,1.79e-11,5;UBERON:0007500,1.79e-11,5;UBERON:0001981,1.79e-11,5;UBERON:0002049,1.79e-11,5;UBERON:0007798,1.79e-11,5;UBERON:0004537,1.79e-11,5;UBERON:0006965,1.79e-11,5;UBERON:0001135,2.57e-11,3;UBERON:0004237,2.57e-11,3;UBERON:0004695,2.57e-11,3;UBERON:0002111,2.57e-11,3;UBERON:0004178,2.57e-11,3;UBERON:0004535,5.24e-07,23;UBERON:0001009,5.24e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,2.64383317748712,1.31790010585369,1.83546752161682,0.782391344348039,0,0.219686182734472,0.388859798148567,0.139986421625363,0,0.167782606057736,0,0,4.88792928468299,5.15760191889762,15.4701627683233,0,0,0,0,0.889294796111139,0.899899717281399,1.97773272513395,1.4209602298922,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605809546665472,1.66257432234928,0.579728977403356,0,0,0,0,0,0.983110940922263,5.45377032249785,3.37721805983729,1.41335829804136,0,5.13305909657271,2.54805239706646,0,0,0,0,0.79928715803342,1.03575153458869,0.593768556259299,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0.247194967734374,1.3013942122792,0,0,0,0.484875253135222,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0.509196819251581,0.497627882440372,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0,0.258703370739016,0,0.189106080167819,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.292399974850665,0.878200461164203,0.268412837520744,0.210289948564127,0.102904612379284,0,0.528901133327089,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0.345369963731791,0,12.0633027151418,15.2293591469239,0.491764273019036,0.551873492609465,0,0.117211686592203,7.70494243270374,1.00988370881749,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0.21183207086382,0.441056796109924,1.6488625294148,0.484393280087717,0.301564624640779,0,0.164140899745061,0,0,0,0,0.740778109478847,0,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0.308132871494482,0.77952493786677,0.179026695667481,0.596044064343795,0,0,0.100966449948148,0.15241361331,0.302478555410522,0.292373642219257,0.481059208201647,0,0.453460767230423,0,0,0,0.386379188064381,1.12609485270709,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.237270036248348,0,0,0.154936841185966,0,0.249810577937946,0,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Mnda | |||
}} |
Revision as of 19:49, 13 September 2013
Short description: | p3@Mnda |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mnda_5end |
Coexpression cluster: | MCL_coexpression_mm9:2884 |
Association with transcript: | -26bp_to_ENSMUST00000009340, NM_001033450_5end |
EntrezGene: | Mnda |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.43e-22 | 6 |
muscle cell | 5.43e-22 | 6 |
myoblast | 5.43e-22 | 6 |
mesodermal cell | 8.90e-19 | 7 |
multi-potent skeletal muscle stem cell | 1.74e-14 | 9 |
cardiocyte | 2.49e-12 | 3 |
striated muscle cell | 2.49e-12 | 3 |
cardiac muscle cell | 2.49e-12 | 3 |
cardiac muscle myoblast | 2.49e-12 | 3 |
smooth muscle cell | 2.57e-11 | 3 |
vascular associated smooth muscle cell | 2.57e-11 | 3 |
aortic smooth muscle cell | 2.57e-11 | 3 |
smooth muscle myoblast | 2.57e-11 | 3 |
bone marrow macrophage | 5.87e-09 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.