FFCP PHASE1:Mm9::chr3:96836317..96836331,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14613|HGNC=|MCL_coexpression_id=45|UniProt=Q01231,Q6TPI9,Q8CAG8|association_with_transcript=-7bp_to_ENSMUST00000072600,ENSMUST00000132256,NM_008121,uc008qoo.1,uc008qop.1_5end|description=CAGE_peak_1_at_Gja5_5end|id=chr3:96836317..96836331,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!9.52e-10!18;UBERON:0000948!9.52e-10!18;UBERON:0005498!9.52e-10!18;UBERON:0004140!9.52e-10!18;UBERON:0009881!9.52e-10!18;UBERON:0004141!9.52e-10!18;UBERON:0003084!9.52e-10!18;UBERON:0007005!9.52e-10!18;UBERON:0004139!9.52e-10!18;UBERON:0004291!9.52e-10!18;UBERON:0002048!1.79e-09!14;UBERON:0000117!1.79e-09!14;UBERON:0000171!1.79e-09!14;UBERON:0000170!1.79e-09!14;UBERON:0005597!1.79e-09!14;UBERON:0000118!1.79e-09!14;UBERON:0000468!2.31e-09!333;UBERON:0000926!3.29e-08!193;UBERON:0004120!3.29e-08!193;UBERON:0006603!3.29e-08!193;UBERON:0005153!1.05e-07!17;UBERON:0000922!1.43e-07!328;UBERON:0001048!1.95e-07!147;UBERON:0005177!2.62e-07!85;UBERON:0004535!2.71e-07!23;UBERON:0001009!2.71e-07!23;UBERON:0003103!4.22e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.57e-10,14;UBERON:0000117,6.57e-10,14;UBERON:0000171,6.57e-10,14;UBERON:0000170,6.57e-10,14;UBERON:0005597,6.57e-10,14;UBERON:0000118,6.57e-10,14;UBERON:0007100,6.58e-10,18;UBERON:0000948,6.58e-10,18;UBERON:0005498,6.58e-10,18;UBERON:0004140,6.58e-10,18;UBERON:0009881,6.58e-10,18;UBERON:0004141,6.58e-10,18;UBERON:0003084,6.58e-10,18;UBERON:0007005,6.58e-10,18;UBERON:0004139,6.58e-10,18;UBERON:0004291,6.58e-10,18;UBERON:0005177,6.07e-09,79;UBERON:0004535,8.21e-08,23;UBERON:0001009,8.21e-08,23;UBERON:0005153,8.39e-08,17;UBERON:0002100,5.32e-07,90;UBERON:0009569,7.79e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,1.0470474879476,1.76469446409304,0,1.94204141212461,0,0,0,0,0,0.878744730937887,0,0,1.43752564364972,0,0,0,0.514518872071894,1.14613375975503,15.9858348606007,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,1.45165457231869,0.945041568321835,0.841299845405528,0.571301968807607,0.883474163806454,0.489963196859816,0.0958454710182364,0.919218786610021,1.10115880999389,0.127687338085188,0.307213066512487,0.659431438650969,0.823388792421687,0,0.837548997004143,0.56276261003168,0.763991238884051,0.883885756421003,0.427115042397309,0.931997229126503,0,0,10.1452571045587,11.185510400758,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0.776813650941515,2.9688427812965,9.1947223186052,7.61163695780353,3.45923245884088,5.42601505989441,3.41007250693544,0.502666365318702,20.0227923864843,17.4965221873093,4.42305275974937,7.60304194752823,2.65009822152472,5.33362778448744,5.59175283654366,0.585561594023094,0.628340120440365,3.57639877292028,0,0,0,0.449371918214468,0,0.125654352112864,0.347648640384553,0.255715457330331,0.41557608911912,0.486723789203273,3.97173519016234,5.10068579501381,0.758168275301024,2.73574412652416,11.1903580947925,5.9774547152703,7.20248519221397,7.08312643827861,2.4493139694478,2.94661556655154,2.24884138943349,2.84573707812917,7.11374376678379,15.695804653929,14.9558455539357,21.7003775103299,22.5218271872734,13.2335823278423,10.2891068203972,9.15557627365069,0,0,0,74.7724038853162,98.9699973120226,82.8285482720668,69.839696997637,78.5089284672141,61.2440438162892,61.6214953588581,53.6546802799238,38.0655016116973,51.3426731730059,37.4301818100337,19.5375831005512,22.2223980886505,22.6136618749782,22.1440590954613,0.630869845692382,0.411618449517138,0.330418782983798,1.32225283331772,15.5700422890721,13.9342003116263,14.0465532841082,7.26060688644033,10.8965241483986,9.13083005340284,1.42358718463353,12.8465184684728,5.7807098024062,3.58121649674071,3.70431765526328,4.49409704327111,3.02593269824572,1.39398891278057,15.7424357791058,16.7945313536301,15.7790829942313,25.0491133249736,21.5287260756065,11.3620028222316,19.6033265085198,13.8753539100826,13.0308944108341,9.99517027766584,1.1858105083486,4.33797274861845,4.12773889737726,4.94696647246678,4.05720242777006,5.54707467430559,9.42115651591253,8.91858026097513,6.97181475132652,4.66754402419738,2.87536413054709,10.7920874823866,8.11297950097858,2.77836765741823,2.33216637578486,4.82443521363367,36.9506380333209,18.9491411770485,13.0371981153621,15.4468028055421,15.9589368836181,38.5264392116176,57.6065610944153,70.2481132288076,65.5762199481754,77.73410606672,56.9253524107229,40.638102049503,54.568454269623,33.7032306494922,0,0,0.491764273019036,1.65562047782839,1.12385412991454,1.17211686592203,0,8.33154059774431,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,3.12268187458191,8.72521457969551,4.72372182125371,5.77395430403874,2.65490276679926,8.98288353773431,8.76738315197778,11.5049098651098,18.6040192514887,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| ||
|EntrezGene=14613 | |||
|HGNC= | |||
|MCL_coexpression_id=45 | |||
|UniProt=Q01231,Q6TPI9,Q8CAG8 | |||
|association_with_transcript=-7bp_to_ENSMUST00000072600,ENSMUST00000132256,NM_008121,uc008qoo.1,uc008qop.1_5end | |||
|description=CAGE_peak_1_at_Gja5_5end | |||
|id=chr3:96836317..96836331,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!9.52e-10!18;UBERON:0000948!9.52e-10!18;UBERON:0005498!9.52e-10!18;UBERON:0004140!9.52e-10!18;UBERON:0009881!9.52e-10!18;UBERON:0004141!9.52e-10!18;UBERON:0003084!9.52e-10!18;UBERON:0007005!9.52e-10!18;UBERON:0004139!9.52e-10!18;UBERON:0004291!9.52e-10!18;UBERON:0002048!1.79e-09!14;UBERON:0000117!1.79e-09!14;UBERON:0000171!1.79e-09!14;UBERON:0000170!1.79e-09!14;UBERON:0005597!1.79e-09!14;UBERON:0000118!1.79e-09!14;UBERON:0000468!2.31e-09!333;UBERON:0000926!3.29e-08!193;UBERON:0004120!3.29e-08!193;UBERON:0006603!3.29e-08!193;UBERON:0005153!1.05e-07!17;UBERON:0000922!1.43e-07!328;UBERON:0001048!1.95e-07!147;UBERON:0005177!2.62e-07!85;UBERON:0004535!2.71e-07!23;UBERON:0001009!2.71e-07!23;UBERON:0003103!4.22e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.57e-10,14;UBERON:0000117,6.57e-10,14;UBERON:0000171,6.57e-10,14;UBERON:0000170,6.57e-10,14;UBERON:0005597,6.57e-10,14;UBERON:0000118,6.57e-10,14;UBERON:0007100,6.58e-10,18;UBERON:0000948,6.58e-10,18;UBERON:0005498,6.58e-10,18;UBERON:0004140,6.58e-10,18;UBERON:0009881,6.58e-10,18;UBERON:0004141,6.58e-10,18;UBERON:0003084,6.58e-10,18;UBERON:0007005,6.58e-10,18;UBERON:0004139,6.58e-10,18;UBERON:0004291,6.58e-10,18;UBERON:0005177,6.07e-09,79;UBERON:0004535,8.21e-08,23;UBERON:0001009,8.21e-08,23;UBERON:0005153,8.39e-08,17;UBERON:0002100,5.32e-07,90;UBERON:0009569,7.79e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,6.37824676133023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67412652294763,0.7813353445238,1.0470474879476,1.76469446409304,0,1.94204141212461,0,0,0,0,0,0.878744730937887,0,0,1.43752564364972,0,0,0,0.514518872071894,1.14613375975503,15.9858348606007,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0.7104801149461,0.599200221036809,0.384218305321555,1.45165457231869,0.945041568321835,0.841299845405528,0.571301968807607,0.883474163806454,0.489963196859816,0.0958454710182364,0.919218786610021,1.10115880999389,0.127687338085188,0.307213066512487,0.659431438650969,0.823388792421687,0,0.837548997004143,0.56276261003168,0.763991238884051,0.883885756421003,0.427115042397309,0.931997229126503,0,0,10.1452571045587,11.185510400758,0,0,0,0,3.23022166303029,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0.776813650941515,2.9688427812965,9.1947223186052,7.61163695780353,3.45923245884088,5.42601505989441,3.41007250693544,0.502666365318702,20.0227923864843,17.4965221873093,4.42305275974937,7.60304194752823,2.65009822152472,5.33362778448744,5.59175283654366,0.585561594023094,0.628340120440365,3.57639877292028,0,0,0,0.449371918214468,0,0.125654352112864,0.347648640384553,0.255715457330331,0.41557608911912,0.486723789203273,3.97173519016234,5.10068579501381,0.758168275301024,2.73574412652416,11.1903580947925,5.9774547152703,7.20248519221397,7.08312643827861,2.4493139694478,2.94661556655154,2.24884138943349,2.84573707812917,7.11374376678379,15.695804653929,14.9558455539357,21.7003775103299,22.5218271872734,13.2335823278423,10.2891068203972,9.15557627365069,0,0,0,74.7724038853162,98.9699973120226,82.8285482720668,69.839696997637,78.5089284672141,61.2440438162892,61.6214953588581,53.6546802799238,38.0655016116973,51.3426731730059,37.4301818100337,19.5375831005512,22.2223980886505,22.6136618749782,22.1440590954613,0.630869845692382,0.411618449517138,0.330418782983798,1.32225283331772,15.5700422890721,13.9342003116263,14.0465532841082,7.26060688644033,10.8965241483986,9.13083005340284,1.42358718463353,12.8465184684728,5.7807098024062,3.58121649674071,3.70431765526328,4.49409704327111,3.02593269824572,1.39398891278057,15.7424357791058,16.7945313536301,15.7790829942313,25.0491133249736,21.5287260756065,11.3620028222316,19.6033265085198,13.8753539100826,13.0308944108341,9.99517027766584,1.1858105083486,4.33797274861845,4.12773889737726,4.94696647246678,4.05720242777006,5.54707467430559,9.42115651591253,8.91858026097513,6.97181475132652,4.66754402419738,2.87536413054709,10.7920874823866,8.11297950097858,2.77836765741823,2.33216637578486,4.82443521363367,36.9506380333209,18.9491411770485,13.0371981153621,15.4468028055421,15.9589368836181,38.5264392116176,57.6065610944153,70.2481132288076,65.5762199481754,77.73410606672,56.9253524107229,40.638102049503,54.568454269623,33.7032306494922,0,0,0.491764273019036,1.65562047782839,1.12385412991454,1.17211686592203,0,8.33154059774431,0.315508219416257,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,3.12268187458191,8.72521457969551,4.72372182125371,5.77395430403874,2.65490276679926,8.98288353773431,8.76738315197778,11.5049098651098,18.6040192514887,18.7535440245796,14.2135561242522,13.0872142611902,9.62542921638748,2.84433082142234,4.21674434299995,3.09406629744561,0,9.54323798365944,10.0899773350549,11.3598628566744,7.80297028026004,6.42127743367454,7.24015690649332,4.56697423671899,9.85621173867584,6.14313005505079,2.64634077665954,1.48397627647332,9.20347232166662,7.72005439080395,6.08798954415996,2.62625439592098,2.91480836629851,0.370850604021019,1.02522528478712,11.144890870014,7.40778109478847,0.565105371014073,1.0935538217682,1.14389086603261,0,0,0,0.954670618015114,12.4952717464548,9.96265388921559,7.45236851670429,7.52717865652087,5.67742665740062,5.93403124093211,5.45512807787217,1.57053565190418,12.9614973291793,1.86401793926078,0,15.8487538806618,16.7113075361669,6.80579159204167,4.52059382172059,3.54807863530634,1.64300134104056,1.3020438484395,0.943734099831398,0.241584120826006,0.576060012515731,0.316011120628178,16.015292007923,7.08705604437308,3.76770386635606,2.32734704367726,3.9736270956253,1.56254084375959,1.77227432609493,2.1202954489111,0.838274873204998,0.907435666231565,0.877120926657772,0,0.233753804363138,1.36038230169127,0,0,0,3.67060228661162,18.9559300205694,6.77661009788881,2.14368379079066,0.501572104035363,0.564751842617067,0,0,0.171853182343688,0,1.5107877947794,0,0,0,0,2.80225838477277,14.3648954424371,12.8050204315601,10.9398022680732,4.19226325255965,3.12533964365024,13.3348036680969,12.3621034343337,9.30665707816264,12.3821633764261,15.4622372933046,14.5242282867279,10.8624148665064,10.8842759088278,11.7168356669451,10.4784612082276,9.15486174964358,10.4170979050401,9.06588981767275,11.6287146906174,12.0004238334895,8.69631450180754,10.0143199777875,11.1916740806893,11.7636725519163,10.9998990259179,9.69518256225695,12.1012067261408,8.82726739998101,11.2228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| |||
|short_description=p1@Gja5 | |||
}} |
Revision as of 03:09, 14 September 2013
Short description: | p1@Gja5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gja5_5end |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | -7bp_to_ENSMUST00000072600, ENSMUST00000132256, NM_008121, uc008qoo.1, uc008qop.1_5end |
EntrezGene: | Gja5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 6.57e-10 | 14 |
respiratory tube | 6.57e-10 | 14 |
respiration organ | 6.57e-10 | 14 |
pair of lungs | 6.57e-10 | 14 |
lung primordium | 6.57e-10 | 14 |
lung bud | 6.57e-10 | 14 |
primary circulatory organ | 6.58e-10 | 18 |
heart | 6.58e-10 | 18 |
primitive heart tube | 6.58e-10 | 18 |
primary heart field | 6.58e-10 | 18 |
anterior lateral plate mesoderm | 6.58e-10 | 18 |
heart tube | 6.58e-10 | 18 |
heart primordium | 6.58e-10 | 18 |
cardiac mesoderm | 6.58e-10 | 18 |
cardiogenic plate | 6.58e-10 | 18 |
heart rudiment | 6.58e-10 | 18 |
trunk region element | 6.07e-09 | 79 |
cardiovascular system | 8.21e-08 | 23 |
circulatory system | 8.21e-08 | 23 |
epithelial bud | 8.39e-08 | 17 |
trunk | 5.32e-07 | 90 |
subdivision of trunk | 7.79e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.