FFCP PHASE1:Mm9::chr2:27297977..27298090,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=620|UniProt=|association_with_transcript=0bp_to_uc008ixj.1_5end|description=CAGE_peak_1_at_uc008ixj.1_5end|id=chr2:27297977..27298090,+|ontology_enrichment_celltype=CL:0000055!9.47e-16!50;CL:0000221!2.32e-15!44;CL:0000133!2.32e-15!44;CL:0002319!5.38e-15!43;CL:0000393!4.21e-13!39;CL:0000211!4.21e-13!39;CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23;CL:0000540!9.22e-12!33;CL:0000047!9.22e-12!33;CL:0000031!9.22e-12!33;CL:0000404!9.22e-12!33|ontology_enrichment_celltype_v019_2=CL:0000221,1.76e-15,44;CL:0000133,1.76e-15,44;CL:0002319,4.11e-15,43;CL:0000393,3.34e-13,39;CL:0000211,3.34e-13,39;CL:0000117,1.09e-12,23;CL:0000337,1.09e-12,23;CL:0000540,7.52e-12,33;CL:0000047,7.52e-12,33;CL:0000031,7.52e-12,33;CL:0000404,7.52e-12,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.57e-34!73;UBERON:0005743!1.57e-34!73;UBERON:0000073!1.10e-33!75;UBERON:0001016!1.10e-33!75;UBERON:0004121!4.06e-31!102;UBERON:0000924!4.06e-31!102;UBERON:0006601!4.06e-31!102;UBERON:0002346!4.45e-29!71;UBERON:0003075!4.45e-29!71;UBERON:0007284!4.45e-29!71;UBERON:0000033!3.13e-28!63;UBERON:0001049!5.47e-28!52;UBERON:0005068!5.47e-28!52;UBERON:0006241!5.47e-28!52;UBERON:0007135!5.47e-28!52;UBERON:0000955!8.61e-27!50;UBERON:0006238!8.61e-27!50;UBERON:0002616!3.05e-26!49;UBERON:0003056!3.65e-23!49;UBERON:0003080!1.93e-21!40;UBERON:0002780!8.09e-21!39;UBERON:0001890!8.09e-21!39;UBERON:0006240!8.09e-21!39;UBERON:0002020!8.90e-20!34;UBERON:0002791!6.16e-17!29;UBERON:0003528!6.16e-17!29;UBERON:0001893!6.16e-17!29;UBERON:0000153!2.31e-13!94;UBERON:0007811!6.83e-13!86;UBERON:0000956!2.14e-12!21;UBERON:0001869!2.14e-12!21;UBERON:0000203!2.14e-12!21;UBERON:0002619!7.84e-11!17;UBERON:0002021!4.90e-08!10;UBERON:0000411!4.90e-08!10;UBERON:0001950!4.90e-08!10;UBERON:0004111!1.69e-07!122;UBERON:0000025!2.85e-07!114;UBERON:0003076!5.20e-07!12;UBERON:0003057!5.20e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.08e-35,73;UBERON:0001016,5.77e-34,75;UBERON:0004121,8.90e-31,95;UBERON:0000924,8.90e-31,95;UBERON:0006601,8.90e-31,95;UBERON:0000073,1.30e-29,54;UBERON:0002346,2.26e-29,64;UBERON:0003075,2.26e-29,64;UBERON:0007284,2.26e-29,64;UBERON:0001049,3.22e-28,52;UBERON:0005068,3.22e-28,52;UBERON:0006241,3.22e-28,52;UBERON:0007135,3.22e-28,52;UBERON:0010371,1.07e-25,73;UBERON:0000955,4.09e-25,47;UBERON:0006238,4.09e-25,47;UBERON:0002616,1.43e-24,46;UBERON:0003056,2.36e-23,49;UBERON:0010314,7.36e-22,92;UBERON:0003080,1.29e-21,40;UBERON:0002780,5.50e-21,39;UBERON:0001890,5.50e-21,39;UBERON:0006240,5.50e-21,39;UBERON:0002020,6.17e-20,34;UBERON:0003528,4.52e-17,29;UBERON:0002791,4.52e-17,29;UBERON:0001893,4.52e-17,29;UBERON:0000956,1.72e-12,21;UBERON:0001869,1.72e-12,21;UBERON:0000203,1.72e-12,21;UBERON:0002619,6.51e-11,17;UBERON:0002021,4.31e-08,10;UBERON:0000411,4.31e-08,10;UBERON:0001950,4.31e-08,10;UBERON:0004111,3.22e-07,122;UBERON:0003076,4.66e-07,12;UBERON:0003057,4.66e-07,12;UBERON:0000025,5.44e-07,114|phase1_expression=23.5418805244047,0,0,0.30246421130683,0,0.16787927191189,0.233612640595526,0,0.703943610758334,0.234064526321993,1.54096171402954,0.558405112967355,0,0.174840804837995,0,0.404950534779652,0,0.157731082679119,0.411343300817216,0,12.161190491603,0.0992909512008853,0,0.319984845586813,0.22940928106717,0.57423196411502,0,0.215471232685889,0.380046838912748,0.252030129759931,0.665191531965914,6.98533740805594,3.07532393792285,15.8481681015439,0,0,0,0,0,0,0,0.683045484958446,0.485510353031154,14.4781340671914,13.584508783415,12.8482726513177,27.3836970521814,21.8025156380447,32.5135550447018,25.8591765768797,19.4581126059254,25.8754615856949,0.335565212115473,0,0,10.0331180054019,8.5960031981627,11.3447860301037,38.8447604850428,42.8482693210347,34.8607271928399,16.9422266034566,20.4537803105562,8.09909745553259,9.88866362566974,7.104801149461,30.5592112728773,46.8746332492297,14.4128561108784,18.765825428105,19.7705463670299,41.7050437229553,32.2468069789356,15.5563315002992,13.2266750005166,16.5459381589804,36.3382407297983,33.4540825783192,32.1037654505549,40.0934314699789,34.0334034200964,33.8593690861894,35.177057874174,34.3285192119325,31.9348337853533,28.2843442054721,26.7658759902314,33.9246991402047,3.40767869999328,6.34801104896998,9.27566363845369,1.72084775396277,0,0.539703191637817,1.29955283489534,0.448026887097336,4.91555470461132,11.759692257886,11.1707981979234,12.3668851078619,16.9012103732017,6.41632387071589,15.2883143823987,0,1.29894624606728,0.253359865475099,1.51657333504435,3.9964357901671,2.07150306917737,21.6725523034644,6.07198643681475,6.39377504455497,5.99600292865752,6.48107354376277,7.64326596382081,15.5826573248798,1.97755974187499,3.7595832799177,2.65383165584962,3.88240439873782,2.42925670306433,2.90925151881133,0,22.8369021669007,20.9446706813455,0.766371165625774,1.07833612055328,0.599902730993408,0.381210681219194,35.0510096207285,37.0575488283087,24.5025986620086,37.8937018019163,37.3344567702283,31.168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| ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=620 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008ixj.1_5end | |||
|description=CAGE_peak_1_at_uc008ixj.1_5end | |||
|id=chr2:27297977..27298090,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.47e-16!50;CL:0000221!2.32e-15!44;CL:0000133!2.32e-15!44;CL:0002319!5.38e-15!43;CL:0000393!4.21e-13!39;CL:0000211!4.21e-13!39;CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23;CL:0000540!9.22e-12!33;CL:0000047!9.22e-12!33;CL:0000031!9.22e-12!33;CL:0000404!9.22e-12!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.76e-15,44;CL:0000133,1.76e-15,44;CL:0002319,4.11e-15,43;CL:0000393,3.34e-13,39;CL:0000211,3.34e-13,39;CL:0000117,1.09e-12,23;CL:0000337,1.09e-12,23;CL:0000540,7.52e-12,33;CL:0000047,7.52e-12,33;CL:0000031,7.52e-12,33;CL:0000404,7.52e-12,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.57e-34!73;UBERON:0005743!1.57e-34!73;UBERON:0000073!1.10e-33!75;UBERON:0001016!1.10e-33!75;UBERON:0004121!4.06e-31!102;UBERON:0000924!4.06e-31!102;UBERON:0006601!4.06e-31!102;UBERON:0002346!4.45e-29!71;UBERON:0003075!4.45e-29!71;UBERON:0007284!4.45e-29!71;UBERON:0000033!3.13e-28!63;UBERON:0001049!5.47e-28!52;UBERON:0005068!5.47e-28!52;UBERON:0006241!5.47e-28!52;UBERON:0007135!5.47e-28!52;UBERON:0000955!8.61e-27!50;UBERON:0006238!8.61e-27!50;UBERON:0002616!3.05e-26!49;UBERON:0003056!3.65e-23!49;UBERON:0003080!1.93e-21!40;UBERON:0002780!8.09e-21!39;UBERON:0001890!8.09e-21!39;UBERON:0006240!8.09e-21!39;UBERON:0002020!8.90e-20!34;UBERON:0002791!6.16e-17!29;UBERON:0003528!6.16e-17!29;UBERON:0001893!6.16e-17!29;UBERON:0000153!2.31e-13!94;UBERON:0007811!6.83e-13!86;UBERON:0000956!2.14e-12!21;UBERON:0001869!2.14e-12!21;UBERON:0000203!2.14e-12!21;UBERON:0002619!7.84e-11!17;UBERON:0002021!4.90e-08!10;UBERON:0000411!4.90e-08!10;UBERON:0001950!4.90e-08!10;UBERON:0004111!1.69e-07!122;UBERON:0000025!2.85e-07!114;UBERON:0003076!5.20e-07!12;UBERON:0003057!5.20e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.08e-35,73;UBERON:0001016,5.77e-34,75;UBERON:0004121,8.90e-31,95;UBERON:0000924,8.90e-31,95;UBERON:0006601,8.90e-31,95;UBERON:0000073,1.30e-29,54;UBERON:0002346,2.26e-29,64;UBERON:0003075,2.26e-29,64;UBERON:0007284,2.26e-29,64;UBERON:0001049,3.22e-28,52;UBERON:0005068,3.22e-28,52;UBERON:0006241,3.22e-28,52;UBERON:0007135,3.22e-28,52;UBERON:0010371,1.07e-25,73;UBERON:0000955,4.09e-25,47;UBERON:0006238,4.09e-25,47;UBERON:0002616,1.43e-24,46;UBERON:0003056,2.36e-23,49;UBERON:0010314,7.36e-22,92;UBERON:0003080,1.29e-21,40;UBERON:0002780,5.50e-21,39;UBERON:0001890,5.50e-21,39;UBERON:0006240,5.50e-21,39;UBERON:0002020,6.17e-20,34;UBERON:0003528,4.52e-17,29;UBERON:0002791,4.52e-17,29;UBERON:0001893,4.52e-17,29;UBERON:0000956,1.72e-12,21;UBERON:0001869,1.72e-12,21;UBERON:0000203,1.72e-12,21;UBERON:0002619,6.51e-11,17;UBERON:0002021,4.31e-08,10;UBERON:0000411,4.31e-08,10;UBERON:0001950,4.31e-08,10;UBERON:0004111,3.22e-07,122;UBERON:0003076,4.66e-07,12;UBERON:0003057,4.66e-07,12;UBERON:0000025,5.44e-07,114 | |||
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| |||
|short_description=p1@uc008ixj.1 | |||
}} |
Revision as of 23:34, 13 September 2013
Short description: | p1@uc008ixj.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_uc008ixj.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:620 |
Association with transcript: | 0bp_to_uc008ixj.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.76e-15 | 44 |
neurectodermal cell | 1.76e-15 | 44 |
neural cell | 4.11e-15 | 43 |
electrically responsive cell | 3.34e-13 | 39 |
electrically active cell | 3.34e-13 | 39 |
CNS neuron (sensu Vertebrata) | 1.09e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.09e-12 | 23 |
neuron | 7.52e-12 | 33 |
neuronal stem cell | 7.52e-12 | 33 |
neuroblast | 7.52e-12 | 33 |
electrically signaling cell | 7.52e-12 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.