FFCP PHASE1:Mm9::chr18:69753168..69753186,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=21413|HGNC=|MCL_coexpression_id=76|UniProt=Q91YV0,Q91XK1|association_with_transcript=88bp_to_ENSMUST00000114977,uc008fnu.1,uc008fnv.1_5end|description=CAGE_peak_12_at_Tcf4_5end|id=chr18:69753168..69753186,+|ontology_enrichment_celltype=CL:0002319!2.11e-12!43;CL:0000055!6.91e-12!50;CL:0000221!1.26e-11!44;CL:0000133!1.26e-11!44;CL:0000393!5.95e-10!39;CL:0000211!5.95e-10!39;CL:0000540!8.68e-10!33;CL:0000047!8.68e-10!33;CL:0000031!8.68e-10!33;CL:0000404!8.68e-10!33|ontology_enrichment_celltype_v019_2=CL:0002319,1.23e-13,43;CL:0000221,4.01e-13,44;CL:0000133,4.01e-13,44;CL:0000540,3.62e-11,33;CL:0000047,3.62e-11,33;CL:0000031,3.62e-11,33;CL:0000404,3.62e-11,33;CL:0002609,1.04e-08,6;CL:0000393,1.98e-08,39;CL:0000211,1.98e-08,39;CL:0000107,3.51e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.53e-20!73;UBERON:0005743!1.53e-20!73;UBERON:0000073!5.98e-20!75;UBERON:0001016!5.98e-20!75;UBERON:0002020!4.93e-16!34;UBERON:0002791!1.31e-15!29;UBERON:0003528!1.31e-15!29;UBERON:0001893!1.31e-15!29;UBERON:0000956!3.36e-15!21;UBERON:0001869!3.36e-15!21;UBERON:0000203!3.36e-15!21;UBERON:0004121!1.51e-14!102;UBERON:0000924!1.51e-14!102;UBERON:0006601!1.51e-14!102;UBERON:0001049!3.17e-14!52;UBERON:0005068!3.17e-14!52;UBERON:0006241!3.17e-14!52;UBERON:0007135!3.17e-14!52;UBERON:0002346!9.84e-14!71;UBERON:0003075!9.84e-14!71;UBERON:0007284!9.84e-14!71;UBERON:0000955!3.77e-13!50;UBERON:0006238!3.77e-13!50;UBERON:0002616!8.27e-13!49;UBERON:0003080!1.37e-12!40;UBERON:0002780!2.06e-12!39;UBERON:0001890!2.06e-12!39;UBERON:0006240!2.06e-12!39;UBERON:0002619!2.30e-12!17;UBERON:0003056!4.14e-11!49;UBERON:0000033!1.29e-09!63;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.64e-25,21;UBERON:0001869,3.64e-25,21;UBERON:0000203,3.64e-25,21;UBERON:0001017,1.19e-23,73;UBERON:0001016,1.32e-22,75;UBERON:0002020,4.82e-21,34;UBERON:0003528,1.75e-20,29;UBERON:0002791,1.75e-20,29;UBERON:0001893,1.75e-20,29;UBERON:0002619,3.01e-20,17;UBERON:0004121,2.93e-17,95;UBERON:0000924,2.93e-17,95;UBERON:0006601,2.93e-17,95;UBERON:0001049,9.84e-16,52;UBERON:0005068,9.84e-16,52;UBERON:0006241,9.84e-16,52;UBERON:0007135,9.84e-16,52;UBERON:0000073,1.50e-15,54;UBERON:0002780,2.61e-15,39;UBERON:0001890,2.61e-15,39;UBERON:0006240,2.61e-15,39;UBERON:0002346,6.93e-15,64;UBERON:0003075,6.93e-15,64;UBERON:0007284,6.93e-15,64;UBERON:0003080,1.06e-14,40;UBERON:0000955,2.09e-14,47;UBERON:0006238,2.09e-14,47;UBERON:0002616,7.10e-14,46;UBERON:0010371,2.28e-12,73;UBERON:0003056,2.43e-12,49;UBERON:0002021,3.24e-12,10;UBERON:0000411,3.24e-12,10;UBERON:0001950,3.24e-12,10;UBERON:0001954,2.02e-09,7;UBERON:0003022,2.02e-09,7;UBERON:0002421,2.02e-09,7;UBERON:0000349,2.02e-09,7;UBERON:0002600,2.02e-09,7;UBERON:0010314,1.06e-08,92;UBERON:0002410,3.51e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946386496074713,0.274228867211478,0.42438965179803,0.680346321208558,0.198581902401771,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.629484089877886,0.811015449756117,0.367093504323363,0.782391344348039,5.23260375313072,4.83309602015838,4.86074747685709,1.81982348112971,1.43752564364972,0.335565212115473,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.809265843438391,1.5869729378161,0.633831403506179,0.677689064138264,0.889294796111139,0,0,0,1.79760066311043,0.768436610643109,15.3460626216547,13.3655878948374,10.3059231062177,0.285650984403804,0.220868540951614,7.96190194897201,7.09256485534949,9.19218786610021,0,1.14918604276669,1.38245879930619,0.659431438650969,0.365950574409639,1.04182674111352,1.3959149950069,0.56276261003168,0.916789486660861,2.35702868378934,1.70846016958924,1.4911955666024,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.445326417194474,0.346970653532272,1.21786191324856,0.461230994512117,0.301445281105245,0.117588707135705,0.251333182659351,0,0.433798070759735,0.884610551949874,0.323533699894818,0.883366073841574,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0.838705871541442,0.599902730993408,0.254140454146129,0.898743836428936,0.915001205637253,1.50785222535437,4.51943232499919,5.37002460393694,1.0389402227978,1.62241263067758,0.407357455401265,0.373220911830279,0,0,0,0,1.62055916824814,0.90422890701429,0.748401490664606,0.512454881139399,1.3118241438362,0.258703370739016,0.431135985865684,0.945530400839096,1.58356011747554,0.43839146485515,2.22437799380478,1.39300866608867,0.823128545631774,0.59710280045548,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0.492502392237286,0.486412857275134,0.438599962275997,1.3173006917463,1.20785776884335,5.88811855979556,11.4224119741006,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0,0,0.432276099749388,0,0,0.342745537829186,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0.339490171550376,0.234690248288502,0.670025029767263,0.238043640886014,0.585400943573396,1.10344600874334,1.10732344824387,1.59454768657487,0.163863314715738,0.518054945597687,0.867894351489069,0,0.54390568381871,0,0,1.12385412991454,0.468846746368813,0.327869890753351,0.252470927204373,0.94652465824877,2.34263246577983,4.52389135238878,2.15071918157297,1.33679204449436,3.11384183867716,2.83367491172426,1.46127928955656,2.76701444562566,1.28528526568723,0.709700426041343,0.534196811001766,1.62886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0,0.822745103010605,0.608929898229199,0.704015124191131,0.63549621259146,0.220528398054962,0,1.13025098687134,0.784068024066026,0.358117032009409,0.328281799490123,0,2.03967832211561,0.341741761595705,0,0.185194527369712,0.188368457004691,0.683471138605126,0,0.339956859987711,0.559805809294632,0.414599921413271,0,0.158167996790568,0.609958401380546,0.540026704109006,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.516639293910924,0.337912250981556,0.352071715937262,0.2604087696879,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0.19318959403219,0.93841237725591,1.09890974560359,0.214368379079066,0,7.34177395402186,10.1271552031579,6.87474616127276,7.73339320546594,4.11049511862385,6.7985450765073,2.02506750069542,4.05289082901798,9.9691329976525,4.14208249401456,0.415149390336707,0,1.87806966329548,0.729320151204882,1.04806581313991,0.919217542250071,1.33348036680969,3.7086310303001,1.28367683836726,1.26348605881899,1.2673964994512,1.50901073108861,2.06011316433741,1.47257850531199,0.918967503289812,1.90517476513229,1.27472758539341,0.578727661391115,0.824171801606613,1.61918812147837,2.05721551431249,2.12970967391205,1.1921809497366,2.18019624948493,1.41164070622996,1.52306294205018,0.914639864363863,1.05227884575137,1.35804113845862,0.561142271657738,0.949080144993393,0.788035859004508,1.22769312950907,1.54936841185966,2.12197272079256,2.49810577937946,1.40358965067245,2.14871054048298,0.956441660344217,0.661774257358546,1.39120701372253|short_description=p12@Tcf4}} | ||
|EntrezGene=21413 | |||
|HGNC= | |||
|MCL_coexpression_id=76 | |||
|UniProt=Q91YV0,Q91XK1 | |||
|association_with_transcript=88bp_to_ENSMUST00000114977,uc008fnu.1,uc008fnv.1_5end | |||
|description=CAGE_peak_12_at_Tcf4_5end | |||
|id=chr18:69753168..69753186,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.11e-12!43;CL:0000055!6.91e-12!50;CL:0000221!1.26e-11!44;CL:0000133!1.26e-11!44;CL:0000393!5.95e-10!39;CL:0000211!5.95e-10!39;CL:0000540!8.68e-10!33;CL:0000047!8.68e-10!33;CL:0000031!8.68e-10!33;CL:0000404!8.68e-10!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.23e-13,43;CL:0000221,4.01e-13,44;CL:0000133,4.01e-13,44;CL:0000540,3.62e-11,33;CL:0000047,3.62e-11,33;CL:0000031,3.62e-11,33;CL:0000404,3.62e-11,33;CL:0002609,1.04e-08,6;CL:0000393,1.98e-08,39;CL:0000211,1.98e-08,39;CL:0000107,3.51e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.53e-20!73;UBERON:0005743!1.53e-20!73;UBERON:0000073!5.98e-20!75;UBERON:0001016!5.98e-20!75;UBERON:0002020!4.93e-16!34;UBERON:0002791!1.31e-15!29;UBERON:0003528!1.31e-15!29;UBERON:0001893!1.31e-15!29;UBERON:0000956!3.36e-15!21;UBERON:0001869!3.36e-15!21;UBERON:0000203!3.36e-15!21;UBERON:0004121!1.51e-14!102;UBERON:0000924!1.51e-14!102;UBERON:0006601!1.51e-14!102;UBERON:0001049!3.17e-14!52;UBERON:0005068!3.17e-14!52;UBERON:0006241!3.17e-14!52;UBERON:0007135!3.17e-14!52;UBERON:0002346!9.84e-14!71;UBERON:0003075!9.84e-14!71;UBERON:0007284!9.84e-14!71;UBERON:0000955!3.77e-13!50;UBERON:0006238!3.77e-13!50;UBERON:0002616!8.27e-13!49;UBERON:0003080!1.37e-12!40;UBERON:0002780!2.06e-12!39;UBERON:0001890!2.06e-12!39;UBERON:0006240!2.06e-12!39;UBERON:0002619!2.30e-12!17;UBERON:0003056!4.14e-11!49;UBERON:0000033!1.29e-09!63;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,3.64e-25,21;UBERON:0001869,3.64e-25,21;UBERON:0000203,3.64e-25,21;UBERON:0001017,1.19e-23,73;UBERON:0001016,1.32e-22,75;UBERON:0002020,4.82e-21,34;UBERON:0003528,1.75e-20,29;UBERON:0002791,1.75e-20,29;UBERON:0001893,1.75e-20,29;UBERON:0002619,3.01e-20,17;UBERON:0004121,2.93e-17,95;UBERON:0000924,2.93e-17,95;UBERON:0006601,2.93e-17,95;UBERON:0001049,9.84e-16,52;UBERON:0005068,9.84e-16,52;UBERON:0006241,9.84e-16,52;UBERON:0007135,9.84e-16,52;UBERON:0000073,1.50e-15,54;UBERON:0002780,2.61e-15,39;UBERON:0001890,2.61e-15,39;UBERON:0006240,2.61e-15,39;UBERON:0002346,6.93e-15,64;UBERON:0003075,6.93e-15,64;UBERON:0007284,6.93e-15,64;UBERON:0003080,1.06e-14,40;UBERON:0000955,2.09e-14,47;UBERON:0006238,2.09e-14,47;UBERON:0002616,7.10e-14,46;UBERON:0010371,2.28e-12,73;UBERON:0003056,2.43e-12,49;UBERON:0002021,3.24e-12,10;UBERON:0000411,3.24e-12,10;UBERON:0001950,3.24e-12,10;UBERON:0001954,2.02e-09,7;UBERON:0003022,2.02e-09,7;UBERON:0002421,2.02e-09,7;UBERON:0000349,2.02e-09,7;UBERON:0002600,2.02e-09,7;UBERON:0010314,1.06e-08,92;UBERON:0002410,3.51e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946386496074713,0.274228867211478,0.42438965179803,0.680346321208558,0.198581902401771,0.261199789138935,0,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.629484089877886,0.811015449756117,0.367093504323363,0.782391344348039,5.23260375313072,4.83309602015838,4.86074747685709,1.81982348112971,1.43752564364972,0.335565212115473,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0.809265843438391,1.5869729378161,0.633831403506179,0.677689064138264,0.889294796111139,0,0,0,1.79760066311043,0.768436610643109,15.3460626216547,13.3655878948374,10.3059231062177,0.285650984403804,0.220868540951614,7.96190194897201,7.09256485534949,9.19218786610021,0,1.14918604276669,1.38245879930619,0.659431438650969,0.365950574409639,1.04182674111352,1.3959149950069,0.56276261003168,0.916789486660861,2.35702868378934,1.70846016958924,1.4911955666024,0.075726193333184,0.377857800533928,0.289864488701678,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0.258937883647172,0.445326417194474,0.346970653532272,1.21786191324856,0.461230994512117,0.301445281105245,0.117588707135705,0.251333182659351,0,0.433798070759735,0.884610551949874,0.323533699894818,0.883366073841574,0.969750506270444,0,0.292780797011547,0.209446706813455,0,0.838705871541442,0.599902730993408,0.254140454146129,0.898743836428936,0.915001205637253,1.50785222535437,4.51943232499919,5.37002460393694,1.0389402227978,1.62241263067758,0.407357455401265,0.373220911830279,0,0,0,0,1.62055916824814,0.90422890701429,0.748401490664606,0.512454881139399,1.3118241438362,0.258703370739016,0.431135985865684,0.945530400839096,1.58356011747554,0.43839146485515,2.22437799380478,1.39300866608867,0.823128545631774,0.59710280045548,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.658239399653922,0.492502392237286,0.486412857275134,0.438599962275997,1.3173006917463,1.20785776884335,5.88811855979556,11.4224119741006,0,0.264450566663544,0,0.464473343720877,0.128867461322093,0.403367049246685,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0,0,0.432276099749388,0,0,0.342745537829186,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0.339490171550376,0.234690248288502,0.670025029767263,0.238043640886014,0.585400943573396,1.10344600874334,1.10732344824387,1.59454768657487,0.163863314715738,0.518054945597687,0.867894351489069,0,0.54390568381871,0,0,1.12385412991454,0.468846746368813,0.327869890753351,0.252470927204373,0.94652465824877,2.34263246577983,4.52389135238878,2.15071918157297,1.33679204449436,3.11384183867716,2.83367491172426,1.46127928955656,2.76701444562566,1.28528526568723,0.709700426041343,0.534196811001766,1.62886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0.177340233642274,0,0.822745103010605,0.608929898229199,0.704015124191131,0.63549621259146,0.220528398054962,0,1.13025098687134,0.784068024066026,0.358117032009409,0.328281799490123,0,2.03967832211561,0.341741761595705,0,0.185194527369712,0.188368457004691,0.683471138605126,0,0.339956859987711,0.559805809294632,0.414599921413271,0,0.158167996790568,0.609958401380546,0.540026704109006,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.516639293910924,0.337912250981556,0.352071715937262,0.2604087696879,0.419437377702843,0.241584120826006,0.288030006257865,0,0,0.308132871494482,0,0,0,0.240390899039938,0.147689527174577,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0.0897138566094757,0,0.19318959403219,0.93841237725591,1.09890974560359,0.214368379079066,0,7.34177395402186,10.1271552031579,6.87474616127276,7.73339320546594,4.11049511862385,6.7985450765073,2.02506750069542,4.05289082901798,9.9691329976525,4.14208249401456,0.415149390336707,0,1.87806966329548,0.729320151204882,1.04806581313991,0.919217542250071,1.33348036680969,3.7086310303001,1.28367683836726,1.26348605881899,1.2673964994512,1.50901073108861,2.06011316433741,1.47257850531199,0.918967503289812,1.90517476513229,1.27472758539341,0.578727661391115,0.824171801606613,1.61918812147837,2.05721551431249,2.12970967391205,1.1921809497366,2.18019624948493,1.41164070622996,1.52306294205018,0.914639864363863,1.05227884575137,1.35804113845862,0.561142271657738,0.949080144993393,0.788035859004508,1.22769312950907,1.54936841185966,2.12197272079256,2.49810577937946,1.40358965067245,2.14871054048298,0.956441660344217,0.661774257358546,1.39120701372253 | |||
|short_description=p12@Tcf4 | |||
}} |
Revision as of 16:41, 13 September 2013
Short description: | p12@Tcf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Tcf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:76 |
Association with transcript: | 88bp_to_ENSMUST00000114977, uc008fnu.1, uc008fnv.1_5end |
EntrezGene: | Tcf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.23e-13 | 43 |
ectodermal cell | 4.01e-13 | 44 |
neurectodermal cell | 4.01e-13 | 44 |
neuron | 3.62e-11 | 33 |
neuronal stem cell | 3.62e-11 | 33 |
neuroblast | 3.62e-11 | 33 |
electrically signaling cell | 3.62e-11 | 33 |
neuron of cerebral cortex | 1.04e-08 | 6 |
electrically responsive cell | 1.98e-08 | 39 |
electrically active cell | 1.98e-08 | 39 |
autonomic neuron | 3.51e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.