FFCP PHASE1:Mm9::chr13:54788984..54789004,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=105239|HGNC=|UniProt=D3Z7N0|association_with_transcript=10bp_to_ENSMUST00000129881_5end|description=CAGE_peak_5_at_Rnf44_5end|id=chr13:54788984..54789004,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002553!1.81e-08!39;UBERON:0002323!4.03e-08!37;UBERON:0004458!4.03e-08!37;UBERON:0003886!5.30e-08!38;UBERON:0003133!1.03e-07!24;UBERON:0005156!1.80e-07!26;UBERON:0000990!1.80e-07!26;UBERON:0000991!2.83e-07!18;UBERON:0005564!2.83e-07!18;UBERON:0000464!9.43e-07!57;UBERON:0004176!9.53e-07!17;UBERON:0009196!9.53e-07!17;UBERON:0009117!9.53e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002553,7.55e-09,39;UBERON:0002323,1.81e-08,37;UBERON:0004458,1.81e-08,37;UBERON:0003886,2.41e-08,38;UBERON:0003133,1.28e-07,24;UBERON:0005156,1.81e-07,26;UBERON:0000990,1.81e-07,26;UBERON:0000991,1.85e-07,18;UBERON:0005564,1.85e-07,18;UBERON:0004176,6.84e-07,17;UBERON:0009196,6.84e-07,17;UBERON:0009117,6.84e-07,17|phase1_expression=1.44133962394315,0.348975407639361,0,0,0,0.33575854382378,0.934450562382103,0.903863264091034,2.81577444303333,2.10658073689794,1.36974374580404,0.8774937489487,0.513602189793617,0.699363219351979,0.333109761815663,0.607425802169478,0,0.315462165358238,0.274228867211478,0.42438965179803,1.27564935226605,0.496454756004426,1.82839852397255,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,1.84519436275371,0,2.02196133825892,1.49611180822643,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0,0,0.377690453926732,0.506884656097573,0.917733760808408,0.782391344348039,1.96222640742402,1.09843091367236,0.388859798148567,0.55994568650145,0,0.503347818173209,2.90144856804538,2.35265659399725,1.28629718017973,0.286533439938757,2.57836046138721,1.82084814773638,3.70293685490423,1.26766280701236,0.338844532069132,0.889294796111139,1.7997994345628,0.988866362566974,0,0.898800331555214,0.768436610643109,2.17748185847803,1.62007125998029,3.36519938162211,0.856952953211411,0.662605622854841,2.57230678351403,3.06705507258356,2.75765635983006,1.10115880999389,0.510749352340751,0,2.1101806036831,1.82975287204819,0.52091337055676,0.558365998002762,0,0.763991238884051,2.06240009831567,1.56608848879013,1.1183966749518,0.605809546665472,0.68014404096107,2.6087803983151,0,2.03991400112325,0.539703191637817,0,1.79210754838934,1.12355536105401,0.170430322578058,0,0,0.422530259330042,0,0,0,1.29894624606728,0.760079596425296,1.01104889002957,1.02765491747154,2.07150306917737,1.7813056687779,1.90833859442749,2.43572382649713,1.38369298353635,1.3565037649736,3.05730638552832,3.26733137457156,2.22475470960936,3.18118585223806,1.76922110389975,0.808834249737046,0.662524555381181,1.93950101254089,0,0.292780797011547,0.83778682725382,1.02182822083437,0.479260498023681,0.599902730993408,0.254140454146129,1.04853447583376,0,0.753926112677186,0.347648640384553,0.767146371990992,0.20778804455956,0.811206315338788,2.44414473240759,0.870848794270651,1.26361379216837,2.10441855886474,2.21204753036596,1.37941262660084,1.98068342785884,1.50704817835715,3.53789795586905,2.8185018462667,2.62364828767241,0.776110112217047,5.17363183038821,3.02569728268511,2.28736461413134,1.53437012699302,0.834141747676794,0.696504333044333,1.64625709126355,3.78165106955137,0.702213187313235,0.772043721344145,0.568326998791185,2.89976081549703,2.11073453982987,0.900310307305074,2.84093682702252,2.55793501271625,2.31400669331067,0.465067889500816,1.60964040839772,1.98501082024188,0.987359099480883,0.820837320395476,1.70244500046297,0.584799949701329,1.3173006917463,1.61047702512446,0.841159794256509,1.85228302282712,0.330418782983798,0.528901133327089,4.69234151177515,2.55460339046482,1.67527699718721,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.823494773620054,1.00534083520108,1.59165177632921,1.36474860983384,0,1.08069024937347,0.995706366271836,6.06937283049861,4.34144347916969,6.76246414038483,2.8511185898344,5.43066964069352,4.48869247298039,3.47800954183415,1.47610147979602,3.61097074035162,2.96153193412321,0.592905254174298,1.00107063429656,1.57247196090562,1.34917267430912,0.405720242777006,0.72353147925725,0.50925170356284,0.863088412352432,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,1.24815069245824,0.757736633841335,0.179397413521912,4.3419916922703,2.40179147216586,1.89491411770485,1.95557971730431,2.03694102930226,0.704070744865506,1.34005005953453,0.952174563544055,1.75620283072019,1.26108115284953,2.21464689648775,0.956728611944923,0.81931657357869,0.690739927463582,1.3018415272336,0,1.08781136763742,0.491764273019036,1.37968373152366,0.642202359951168,0.937693492737625,0.819674726883377,1.76729649043061,2.2085575359138,1.56175497718655,2.80050417052639,1.43381278771531,2.00518806674155,1.98153571552183,1.61924280669958,1.75353514746787,2.76701444562566,1.60660658210904,4.25820255624806,1.95872164033981,4.39794790254655,4.28922319728592,10.619611067197,2.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| ||
|EntrezGene=105239 | |||
|HGNC= | |||
|UniProt=D3Z7N0 | |||
|association_with_transcript=10bp_to_ENSMUST00000129881_5end | |||
|description=CAGE_peak_5_at_Rnf44_5end | |||
|id=chr13:54788984..54789004,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002553!1.81e-08!39;UBERON:0002323!4.03e-08!37;UBERON:0004458!4.03e-08!37;UBERON:0003886!5.30e-08!38;UBERON:0003133!1.03e-07!24;UBERON:0005156!1.80e-07!26;UBERON:0000990!1.80e-07!26;UBERON:0000991!2.83e-07!18;UBERON:0005564!2.83e-07!18;UBERON:0000464!9.43e-07!57;UBERON:0004176!9.53e-07!17;UBERON:0009196!9.53e-07!17;UBERON:0009117!9.53e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002553,7.55e-09,39;UBERON:0002323,1.81e-08,37;UBERON:0004458,1.81e-08,37;UBERON:0003886,2.41e-08,38;UBERON:0003133,1.28e-07,24;UBERON:0005156,1.81e-07,26;UBERON:0000990,1.81e-07,26;UBERON:0000991,1.85e-07,18;UBERON:0005564,1.85e-07,18;UBERON:0004176,6.84e-07,17;UBERON:0009196,6.84e-07,17;UBERON:0009117,6.84e-07,17 | |||
|phase1_expression=1.44133962394315,0.348975407639361,0,0,0,0.33575854382378,0.934450562382103,0.903863264091034,2.81577444303333,2.10658073689794,1.36974374580404,0.8774937489487,0.513602189793617,0.699363219351979,0.333109761815663,0.607425802169478,0,0.315462165358238,0.274228867211478,0.42438965179803,1.27564935226605,0.496454756004426,1.82839852397255,0.319984845586813,0,0,0,0,0.190023419456374,0,0,0,1.84519436275371,0,2.02196133825892,1.49611180822643,0.408338712524738,0.418531630736908,0,0,0.588231488031014,0,0,0.377690453926732,0.506884656097573,0.917733760808408,0.782391344348039,1.96222640742402,1.09843091367236,0.388859798148567,0.55994568650145,0,0.503347818173209,2.90144856804538,2.35265659399725,1.28629718017973,0.286533439938757,2.57836046138721,1.82084814773638,3.70293685490423,1.26766280701236,0.338844532069132,0.889294796111139,1.7997994345628,0.988866362566974,0,0.898800331555214,0.768436610643109,2.17748185847803,1.62007125998029,3.36519938162211,0.856952953211411,0.662605622854841,2.57230678351403,3.06705507258356,2.75765635983006,1.10115880999389,0.510749352340751,0,2.1101806036831,1.82975287204819,0.52091337055676,0.558365998002762,0,0.763991238884051,2.06240009831567,1.56608848879013,1.1183966749518,0.605809546665472,0.68014404096107,2.6087803983151,0,2.03991400112325,0.539703191637817,0,1.79210754838934,1.12355536105401,0.170430322578058,0,0,0.422530259330042,0,0,0,1.29894624606728,0.760079596425296,1.01104889002957,1.02765491747154,2.07150306917737,1.7813056687779,1.90833859442749,2.43572382649713,1.38369298353635,1.3565037649736,3.05730638552832,3.26733137457156,2.22475470960936,3.18118585223806,1.76922110389975,0.808834249737046,0.662524555381181,1.93950101254089,0,0.292780797011547,0.83778682725382,1.02182822083437,0.479260498023681,0.599902730993408,0.254140454146129,1.04853447583376,0,0.753926112677186,0.347648640384553,0.767146371990992,0.20778804455956,0.811206315338788,2.44414473240759,0.870848794270651,1.26361379216837,2.10441855886474,2.21204753036596,1.37941262660084,1.98068342785884,1.50704817835715,3.53789795586905,2.8185018462667,2.62364828767241,0.776110112217047,5.17363183038821,3.02569728268511,2.28736461413134,1.53437012699302,0.834141747676794,0.696504333044333,1.64625709126355,3.78165106955137,0.702213187313235,0.772043721344145,0.568326998791185,2.89976081549703,2.11073453982987,0.900310307305074,2.84093682702252,2.55793501271625,2.31400669331067,0.465067889500816,1.60964040839772,1.98501082024188,0.987359099480883,0.820837320395476,1.70244500046297,0.584799949701329,1.3173006917463,1.61047702512446,0.841159794256509,1.85228302282712,0.330418782983798,0.528901133327089,4.69234151177515,2.55460339046482,1.67527699718721,1.00841762311671,1.11189021922435,0.760902504450237,0.474529061544512,0.823494773620054,1.00534083520108,1.59165177632921,1.36474860983384,0,1.08069024937347,0.995706366271836,6.06937283049861,4.34144347916969,6.76246414038483,2.8511185898344,5.43066964069352,4.48869247298039,3.47800954183415,1.47610147979602,3.61097074035162,2.96153193412321,0.592905254174298,1.00107063429656,1.57247196090562,1.34917267430912,0.405720242777006,0.72353147925725,0.50925170356284,0.863088412352432,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,1.24815069245824,0.757736633841335,0.179397413521912,4.3419916922703,2.40179147216586,1.89491411770485,1.95557971730431,2.03694102930226,0.704070744865506,1.34005005953453,0.952174563544055,1.75620283072019,1.26108115284953,2.21464689648775,0.956728611944923,0.81931657357869,0.690739927463582,1.3018415272336,0,1.08781136763742,0.491764273019036,1.37968373152366,0.642202359951168,0.937693492737625,0.819674726883377,1.76729649043061,2.2085575359138,1.56175497718655,2.80050417052639,1.43381278771531,2.00518806674155,1.98153571552183,1.61924280669958,1.75353514746787,2.76701444562566,1.60660658210904,4.25820255624806,1.95872164033981,4.39794790254655,4.28922319728592,10.619611067197,2.6705869977048,2.72091201268276,2.82907619633847,2.36241514304618,2.76691633149535,2.58428293168221,4.72593848320757,1.78248689192361,3.16036757935816,5.27093042874994,0,1.02131881726136,2.52085531643834,2.8458910432206,1.50035924522115,2.12808280370728,1.42695054081656,0.658196082408484,1.8267896946876,2.3467170806371,2.1183207086382,0.441056796109924,3.62749756471256,3.06782410722221,0.784068024066026,0.835606408021955,1.96969079694074,0.582961673259701,0.741701208042039,0.512612642393558,1.857481811669,0.740778109478847,0.941842285023455,0.683471138605126,0,2.20971958992012,0.69975726161829,0.690999869022119,2.86401185404534,2.68885594543965,1.01659733563424,0.86404272657441,1.67270636811575,0.655087691238533,2.02296519577231,1.90102948168273,1.57053565190418,0.90730481304255,3.72803587852155,6.76431526421028,4.33597983527538,2.31641886639937,1.75006069509643,1.16243841129958,3.04121025883401,4.69428954583016,3.77592716047455,3.67007705489988,1.93267296660805,4.32045009386798,0.632022241256357,0.810900861160657,0.8216876573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| |||
|short_description=p5@Rnf44 | |||
}} |
Revision as of 00:48, 13 September 2013
Short description: | p5@Rnf44 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rnf44_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENSMUST00000129881_5end |
EntrezGene: | Rnf44 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical cavity | 7.55e-09 | 39 |
body cavity | 1.81e-08 | 37 |
body cavity or lining | 1.81e-08 | 37 |
body cavity precursor | 2.41e-08 | 38 |
reproductive organ | 1.28e-07 | 24 |
reproductive structure | 1.81e-07 | 26 |
reproductive system | 1.81e-07 | 26 |
gonad | 1.85e-07 | 18 |
gonad primordium | 1.85e-07 | 18 |
external genitalia | 6.84e-07 | 17 |
indifferent external genitalia | 6.84e-07 | 17 |
indifferent gonad | 6.84e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.