FFCP PHASE1:Mm9::chr6:137200818..137200847,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=19277|HGNC=|MCL_coexpression_id=914|UniProt=E9Q612,E9Q4I1|association_with_transcript=0bp_to_ENSMUST00000077115,ENSMUST00000167679,NM_001164401,NM_011216,uc009emu.2,uc009emv.2,uc009emw.2_5end|description=CAGE_peak_1_at_Ptpro_5end|id=chr6:137200818..137200847,+|ontology_enrichment_celltype=CL:0000117!1.04e-16!23;CL:0000337!1.04e-16!23;CL:0000540!3.29e-16!33;CL:0000047!3.29e-16!33;CL:0000031!3.29e-16!33;CL:0000404!3.29e-16!33;CL:0002319!3.73e-12!43;CL:0000221!1.61e-11!44;CL:0000133!1.61e-11!44;CL:0000393!2.32e-11!39;CL:0000211!2.32e-11!39;CL:0000055!2.36e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.14e-20,23;CL:0000337,4.14e-20,23;CL:0000540,1.16e-15,33;CL:0000047,1.16e-15,33;CL:0000031,1.16e-15,33;CL:0000404,1.16e-15,33;CL:0000393,1.40e-11,39;CL:0000211,1.40e-11,39;CL:0002319,3.19e-10,43;CL:0000221,9.32e-10,44;CL:0000133,9.32e-10,44;CL:0002609,3.13e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.26e-25!73;UBERON:0005743!2.26e-25!73;UBERON:0000073!2.90e-25!75;UBERON:0001016!2.90e-25!75;UBERON:0004121!7.51e-24!102;UBERON:0000924!7.51e-24!102;UBERON:0006601!7.51e-24!102;UBERON:0002346!1.57e-22!71;UBERON:0003075!1.57e-22!71;UBERON:0007284!1.57e-22!71;UBERON:0001049!4.50e-21!52;UBERON:0005068!4.50e-21!52;UBERON:0006241!4.50e-21!52;UBERON:0007135!4.50e-21!52;UBERON:0003056!1.56e-20!49;UBERON:0000033!5.57e-20!63;UBERON:0000955!1.54e-19!50;UBERON:0006238!1.54e-19!50;UBERON:0002616!9.80e-19!49;UBERON:0003080!6.38e-18!40;UBERON:0002780!2.75e-17!39;UBERON:0001890!2.75e-17!39;UBERON:0006240!2.75e-17!39;UBERON:0002020!2.01e-16!34;UBERON:0002791!3.97e-13!29;UBERON:0003528!3.97e-13!29;UBERON:0001893!3.97e-13!29;UBERON:0007811!3.41e-09!86;UBERON:0000956!2.86e-08!21;UBERON:0001869!2.86e-08!21;UBERON:0000203!2.86e-08!21;UBERON:0000153!7.46e-08!94;UBERON:0000489!2.54e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.38e-25,73;UBERON:0000073,2.89e-25,54;UBERON:0001016,4.35e-24,75;UBERON:0001049,6.28e-24,52;UBERON:0005068,6.28e-24,52;UBERON:0006241,6.28e-24,52;UBERON:0007135,6.28e-24,52;UBERON:0002346,8.56e-24,64;UBERON:0003075,8.56e-24,64;UBERON:0007284,8.56e-24,64;UBERON:0003056,1.06e-23,49;UBERON:0003080,4.92e-22,40;UBERON:0004121,1.73e-21,95;UBERON:0000924,1.73e-21,95;UBERON:0006601,1.73e-21,95;UBERON:0002780,2.97e-21,39;UBERON:0001890,2.97e-21,39;UBERON:0006240,2.97e-21,39;UBERON:0000955,2.53e-20,47;UBERON:0006238,2.53e-20,47;UBERON:0002020,3.28e-20,34;UBERON:0002616,2.23e-19,46;UBERON:0010371,3.36e-19,73;UBERON:0003528,3.78e-16,29;UBERON:0002791,3.78e-16,29;UBERON:0001893,3.78e-16,29;UBERON:0010314,2.03e-11,92;UBERON:0000956,3.69e-10,21;UBERON:0001869,3.69e-10,21;UBERON:0000203,3.69e-10,21;UBERON:0000489,1.44e-08,21;UBERON:0002420,1.59e-07,8;UBERON:0007245,1.59e-07,8;UBERON:0010009,1.59e-07,8;UBERON:0010011,1.59e-07,8;UBERON:0000454,1.59e-07,8;UBERON:0002619,4.85e-07,17|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.29616883407888,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,19.4223802425214,24.3335850465135,23.4517619297286,0,0,0,0,0,0.898800331555214,1.53687322128622,26.2334719140448,31.0513658162889,21.0324961351382,14.568200204594,9.93908434282261,24.9881230398506,27.0284228271427,34.9303138911808,3.30347642998166,6.76742891851495,5.37622866396852,12.0016521834476,15.4614117688072,14.5855743755893,5.02529398202486,9.56696437053856,9.16789486660861,12.0797720044204,9.11178757114259,9.13357284543973,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.867426633830679,1.21786191324856,0.691846491768175,0.301445281105245,0.823120949949934,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,8.53806644607489,5.49000723382352,19.8533876338326,6.60532416730651,5.62574006126727,4.98691306942944,8.4365456795234,0.916554274652847,0,0,2.52530227063769,0.390361328888111,0.689706313300419,1.80062129805349,2.10986744970001,4.49040894398764,7.55870949680614,7.40243624021858,4.39795730256327,0,0,1.23165786914764,0.657587197282725,0.278047249225598,0,0,3.78165106955137,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,7.20332286654991,0,0,0,0.464473343720877,0.38660238396628,1.00841762311671,1.11189021922435,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,4.1726938209678,5.9409226557059,16.9061603509621,11.4044743593376,11.6371492300575,10.3099655238768,16.8841554121767,10.1851002105925,9.89091985400661,7.40382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,1.14075483509418,1.01847051465113,0.938760993154008,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,1.76605648986571,3.8679856575427,0,0,0.315508219416257,0.780877488593277,0.646270193198397,2.15071918157297,2.67358408898873,1.98153571552183,1.21443210502468,0.584511715822624,1.58115111178609,126.921919986614,0.141940085208269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| ||
|EntrezGene=19277 | |||
|HGNC= | |||
|MCL_coexpression_id=914 | |||
|UniProt=E9Q612,E9Q4I1 | |||
|association_with_transcript=0bp_to_ENSMUST00000077115,ENSMUST00000167679,NM_001164401,NM_011216,uc009emu.2,uc009emv.2,uc009emw.2_5end | |||
|description=CAGE_peak_1_at_Ptpro_5end | |||
|id=chr6:137200818..137200847,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.04e-16!23;CL:0000337!1.04e-16!23;CL:0000540!3.29e-16!33;CL:0000047!3.29e-16!33;CL:0000031!3.29e-16!33;CL:0000404!3.29e-16!33;CL:0002319!3.73e-12!43;CL:0000221!1.61e-11!44;CL:0000133!1.61e-11!44;CL:0000393!2.32e-11!39;CL:0000211!2.32e-11!39;CL:0000055!2.36e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.14e-20,23;CL:0000337,4.14e-20,23;CL:0000540,1.16e-15,33;CL:0000047,1.16e-15,33;CL:0000031,1.16e-15,33;CL:0000404,1.16e-15,33;CL:0000393,1.40e-11,39;CL:0000211,1.40e-11,39;CL:0002319,3.19e-10,43;CL:0000221,9.32e-10,44;CL:0000133,9.32e-10,44;CL:0002609,3.13e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.26e-25!73;UBERON:0005743!2.26e-25!73;UBERON:0000073!2.90e-25!75;UBERON:0001016!2.90e-25!75;UBERON:0004121!7.51e-24!102;UBERON:0000924!7.51e-24!102;UBERON:0006601!7.51e-24!102;UBERON:0002346!1.57e-22!71;UBERON:0003075!1.57e-22!71;UBERON:0007284!1.57e-22!71;UBERON:0001049!4.50e-21!52;UBERON:0005068!4.50e-21!52;UBERON:0006241!4.50e-21!52;UBERON:0007135!4.50e-21!52;UBERON:0003056!1.56e-20!49;UBERON:0000033!5.57e-20!63;UBERON:0000955!1.54e-19!50;UBERON:0006238!1.54e-19!50;UBERON:0002616!9.80e-19!49;UBERON:0003080!6.38e-18!40;UBERON:0002780!2.75e-17!39;UBERON:0001890!2.75e-17!39;UBERON:0006240!2.75e-17!39;UBERON:0002020!2.01e-16!34;UBERON:0002791!3.97e-13!29;UBERON:0003528!3.97e-13!29;UBERON:0001893!3.97e-13!29;UBERON:0007811!3.41e-09!86;UBERON:0000956!2.86e-08!21;UBERON:0001869!2.86e-08!21;UBERON:0000203!2.86e-08!21;UBERON:0000153!7.46e-08!94;UBERON:0000489!2.54e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.38e-25,73;UBERON:0000073,2.89e-25,54;UBERON:0001016,4.35e-24,75;UBERON:0001049,6.28e-24,52;UBERON:0005068,6.28e-24,52;UBERON:0006241,6.28e-24,52;UBERON:0007135,6.28e-24,52;UBERON:0002346,8.56e-24,64;UBERON:0003075,8.56e-24,64;UBERON:0007284,8.56e-24,64;UBERON:0003056,1.06e-23,49;UBERON:0003080,4.92e-22,40;UBERON:0004121,1.73e-21,95;UBERON:0000924,1.73e-21,95;UBERON:0006601,1.73e-21,95;UBERON:0002780,2.97e-21,39;UBERON:0001890,2.97e-21,39;UBERON:0006240,2.97e-21,39;UBERON:0000955,2.53e-20,47;UBERON:0006238,2.53e-20,47;UBERON:0002020,3.28e-20,34;UBERON:0002616,2.23e-19,46;UBERON:0010371,3.36e-19,73;UBERON:0003528,3.78e-16,29;UBERON:0002791,3.78e-16,29;UBERON:0001893,3.78e-16,29;UBERON:0010314,2.03e-11,92;UBERON:0000956,3.69e-10,21;UBERON:0001869,3.69e-10,21;UBERON:0000203,3.69e-10,21;UBERON:0000489,1.44e-08,21;UBERON:0002420,1.59e-07,8;UBERON:0007245,1.59e-07,8;UBERON:0010009,1.59e-07,8;UBERON:0010011,1.59e-07,8;UBERON:0000454,1.59e-07,8;UBERON:0002619,4.85e-07,17 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.29616883407888,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0,0,0,0,0,0,0,0,0,19.4223802425214,24.3335850465135,23.4517619297286,0,0,0,0,0,0.898800331555214,1.53687322128622,26.2334719140448,31.0513658162889,21.0324961351382,14.568200204594,9.93908434282261,24.9881230398506,27.0284228271427,34.9303138911808,3.30347642998166,6.76742891851495,5.37622866396852,12.0016521834476,15.4614117688072,14.5855743755893,5.02529398202486,9.56696437053856,9.16789486660861,12.0797720044204,9.11178757114259,9.13357284543973,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.867426633830679,1.21786191324856,0.691846491768175,0.301445281105245,0.823120949949934,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,8.53806644607489,5.49000723382352,19.8533876338326,6.60532416730651,5.62574006126727,4.98691306942944,8.4365456795234,0.916554274652847,0,0,2.52530227063769,0.390361328888111,0.689706313300419,1.80062129805349,2.10986744970001,4.49040894398764,7.55870949680614,7.40243624021858,4.39795730256327,0,0,1.23165786914764,0.657587197282725,0.278047249225598,0,0,3.78165106955137,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20579897128254,7.20332286654991,0,0,0,0.464473343720877,0.38660238396628,1.00841762311671,1.11189021922435,0.380451252225118,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,4.1726938209678,5.9409226557059,16.9061603509621,11.4044743593376,11.6371492300575,10.3099655238768,16.8841554121767,10.1851002105925,9.89091985400661,7.40382983530803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,1.14075483509418,1.01847051465113,0.938760993154008,0.335012514883631,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,1.76605648986571,3.8679856575427,0,0,0.315508219416257,0.780877488593277,0.646270193198397,2.15071918157297,2.67358408898873,1.98153571552183,1.21443210502468,0.584511715822624,1.58115111178609,126.921919986614,0.141940085208269,0.890328018336276,0.977321756121456,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0,0,0,0,0,14.9793426531667,1.26042765821917,1.55230420539305,3.21505552547388,3.90148514013002,6.59964625127661,6.58196082408484,3.65357938937519,0,0,0,0.16488625294148,0.968786560175433,1.32688434841943,0.596861720015682,0.164140899745061,0,3.70850604021019,0.170870880797853,0,0,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.540026704109006,1.04544148007234,0,0,0.247960367176008,0,0,0,0,6.13017838780313,4.46737924234164,6.02798683866548,4.00395452780966,4.73077151374179,3.52071715937262,0.781226309063701,0.524296722128554,0,0,0,0.405450430580328,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,6.21227026878773,6.44455331110048,4.58316410751517,3.43706364687375,1.37016503954128,3.0215755895588,2.70009000092722,1.80128481289688,1.81256963593682,3.10656187051092,0.103787347584177,0.798049746802062,4.09760653809922,4.37592090722929,0.419226325255965,2.20612210140017,3.77819437262746,2.26638562962784,3.20919209591815,4.04315538822076,2.5347929989024,1.88626341386076,4.02658482120494,4.54578582074572,4.82457939227151,3.33405583898152,3.70829843023538,3.6652751888104,6.1812885120496,2.79677948255355,1.02860775715625,2.48466128623072,3.09967046931517,2.32554266611726,3.01150017329058,2.36920902096694,3.65855945745545,2.89376682581627,3.25929873230068,6.17256498823512,3.55905054372522,3.94017929502254,4.09231043169689,3.56354734727722,1.35034627686799,6.74488560432454,3.97683734357194,3.00819475667618,0.765153328275374,0,0.695603506861264 | |||
|short_description=p1@Ptpro | |||
}} |
Revision as of 09:13, 14 September 2013
Short description: | p1@Ptpro |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ptpro_5end |
Coexpression cluster: | MCL_coexpression_mm9:914 |
Association with transcript: | 0bp_to_ENSMUST00000077115, ENSMUST00000167679, NM_001164401, NM_011216, uc009emu.2, uc009emv.2, uc009emw.2_5end |
EntrezGene: | Ptpro |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.14e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.14e-20 | 23 |
neuron | 1.16e-15 | 33 |
neuronal stem cell | 1.16e-15 | 33 |
neuroblast | 1.16e-15 | 33 |
electrically signaling cell | 1.16e-15 | 33 |
electrically responsive cell | 1.40e-11 | 39 |
electrically active cell | 1.40e-11 | 39 |
neural cell | 3.19e-10 | 43 |
ectodermal cell | 9.32e-10 | 44 |
neurectodermal cell | 9.32e-10 | 44 |
neuron of cerebral cortex | 3.13e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.