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FFCP PHASE1:Mm9::chr9:41932351..41932358,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=20660|HGNC=|MCL_coexpression_id=552|UniProt=O88307|association_with_transcript=13bp_to_NM_011436,uc009pap.1_5end|description=CAGE_peak_4_at_Sorl1_5end|id=chr9:41932351..41932358,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.21e-16!52;UBERON:0005068!3.21e-16!52;UBERON:0006241!3.21e-16!52;UBERON:0007135!3.21e-16!52;UBERON:0000955!3.75e-16!50;UBERON:0006238!3.75e-16!50;UBERON:0002616!1.07e-15!49;UBERON:0000033!5.60e-14!63;UBERON:0002020!3.10e-12!34;UBERON:0003080!3.23e-12!40;UBERON:0001017!3.88e-12!73;UBERON:0005743!3.88e-12!73;UBERON:0002780!9.75e-12!39;UBERON:0001890!9.75e-12!39;UBERON:0006240!9.75e-12!39;UBERON:0000073!2.57e-11!75;UBERON:0001016!2.57e-11!75;UBERON:0002791!6.04e-11!29;UBERON:0003528!6.04e-11!29;UBERON:0001893!6.04e-11!29;UBERON:0002346!6.87e-11!71;UBERON:0003075!6.87e-11!71;UBERON:0007284!6.87e-11!71;UBERON:0003056!2.03e-10!49;UBERON:0004121!1.70e-09!102;UBERON:0000924!1.70e-09!102;UBERON:0006601!1.70e-09!102;UBERON:0000956!3.38e-09!21;UBERON:0001869!3.38e-09!21;UBERON:0000203!3.38e-09!21;UBERON:0007811!4.32e-09!86;UBERON:0002619!1.27e-07!17;UBERON:0000153!2.81e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.01e-14,54;UBERON:0000955,1.45e-13,47;UBERON:0006238,1.45e-13,47;UBERON:0001049,6.23e-13,52;UBERON:0005068,6.23e-13,52;UBERON:0006241,6.23e-13,52;UBERON:0007135,6.23e-13,52;UBERON:0002616,8.21e-13,46;UBERON:0001017,2.06e-11,73;UBERON:0002346,3.68e-11,64;UBERON:0003075,3.68e-11,64;UBERON:0007284,3.68e-11,64;UBERON:0002021,5.08e-11,10;UBERON:0000411,5.08e-11,10;UBERON:0001950,5.08e-11,10;UBERON:0001016,6.97e-11,75;UBERON:0003528,1.11e-10,29;UBERON:0002791,1.11e-10,29;UBERON:0001893,1.11e-10,29;UBERON:0003080,8.46e-10,40;UBERON:0002020,1.45e-09,34;UBERON:0000956,3.77e-09,21;UBERON:0001869,3.77e-09,21;UBERON:0000203,3.77e-09,21;UBERON:0002780,4.75e-09,39;UBERON:0001890,4.75e-09,39;UBERON:0006240,4.75e-09,39;UBERON:0003056,5.43e-09,49;UBERON:0010371,7.56e-09,73;UBERON:0004121,2.31e-08,95;UBERON:0000924,2.31e-08,95;UBERON:0006601,2.31e-08,95;UBERON:0002619,2.72e-08,17;UBERON:0007023,3.38e-07,51|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,1.54947988129892,0,0.70219357896598,0,0,0.342401459862411,0.174840804837995,0.666219523631325,1.41732687172878,0,1.57731082679119,2.60517423850904,6.79023442876848,1.02051948181284,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0,11.7188856606334,10.1573594788094,12.5645698553712,21.7645650571475,18.442228093878,14.5653105909346,0,0,0,0,0.872100625521786,0.439372365468944,0.388859798148567,0.139986421625363,0,2.18117387875057,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.599200221036809,1.53687322128622,2.28117147078651,0.675029691658453,0.630974884054146,1.42825492201902,0.441737081903227,0.857435594504678,1.0543001812006,0.919218786610021,1.10115880999389,2.55374676170375,2.15049146558741,0.791317726381163,0.457438218012048,0,3.07101298901519,1.68828783009504,2.13917546887534,0.883885756421003,0.996601765593721,0.559198337475902,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,1.03575153458869,0.148442139064825,0,0,0,0.301445281105245,0.23517741427141,0.376999773989026,0,0.433798070759735,2.65383165584962,0.161766849947409,1.76673214768315,0.969750506270444,1.86391761218122,10.5401086924157,13.823482649688,0.255457055208591,0.11981512450592,0,0,1.64769703345305,1.83000241127451,0.879580464790051,3.99795936442236,6.13717097592793,2.28566849015516,3.24482526135515,0,1.36847667671102,0.252722758433675,3.15662783829711,0,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0,0.0937017245597288,1.55222022443409,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0.134206418760372,1.89260953707715,0.308713837137853,0.330418782983798,0,0,0,0.257734922644187,1.00841762311671,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0.596869416123452,0.974820435595601,0,0.648414149624083,0.597423819763102,0,0.228497025219458,0,0,0.775809948670503,0.210407459670956,0.505892296994058,0.885660887877613,1.09899109488962,0.616985819609003,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,1.66277871149944,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0.975668239288994,1.26108115284953,0.8858587585951,1.11618338060241,0.983179888294428,1.20879487306127,1.44649058581512,0,0,0.491764273019036,0.551873492609465,2.0871576698413,3.16471553798949,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,1.28528526568723,0,0,0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|EntrezGene=20660
|HGNC=
|MCL_coexpression_id=552
|UniProt=O88307
|association_with_transcript=13bp_to_NM_011436,uc009pap.1_5end
|description=CAGE_peak_4_at_Sorl1_5end
|id=chr9:41932351..41932358,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.21e-16!52;UBERON:0005068!3.21e-16!52;UBERON:0006241!3.21e-16!52;UBERON:0007135!3.21e-16!52;UBERON:0000955!3.75e-16!50;UBERON:0006238!3.75e-16!50;UBERON:0002616!1.07e-15!49;UBERON:0000033!5.60e-14!63;UBERON:0002020!3.10e-12!34;UBERON:0003080!3.23e-12!40;UBERON:0001017!3.88e-12!73;UBERON:0005743!3.88e-12!73;UBERON:0002780!9.75e-12!39;UBERON:0001890!9.75e-12!39;UBERON:0006240!9.75e-12!39;UBERON:0000073!2.57e-11!75;UBERON:0001016!2.57e-11!75;UBERON:0002791!6.04e-11!29;UBERON:0003528!6.04e-11!29;UBERON:0001893!6.04e-11!29;UBERON:0002346!6.87e-11!71;UBERON:0003075!6.87e-11!71;UBERON:0007284!6.87e-11!71;UBERON:0003056!2.03e-10!49;UBERON:0004121!1.70e-09!102;UBERON:0000924!1.70e-09!102;UBERON:0006601!1.70e-09!102;UBERON:0000956!3.38e-09!21;UBERON:0001869!3.38e-09!21;UBERON:0000203!3.38e-09!21;UBERON:0007811!4.32e-09!86;UBERON:0002619!1.27e-07!17;UBERON:0000153!2.81e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.01e-14,54;UBERON:0000955,1.45e-13,47;UBERON:0006238,1.45e-13,47;UBERON:0001049,6.23e-13,52;UBERON:0005068,6.23e-13,52;UBERON:0006241,6.23e-13,52;UBERON:0007135,6.23e-13,52;UBERON:0002616,8.21e-13,46;UBERON:0001017,2.06e-11,73;UBERON:0002346,3.68e-11,64;UBERON:0003075,3.68e-11,64;UBERON:0007284,3.68e-11,64;UBERON:0002021,5.08e-11,10;UBERON:0000411,5.08e-11,10;UBERON:0001950,5.08e-11,10;UBERON:0001016,6.97e-11,75;UBERON:0003528,1.11e-10,29;UBERON:0002791,1.11e-10,29;UBERON:0001893,1.11e-10,29;UBERON:0003080,8.46e-10,40;UBERON:0002020,1.45e-09,34;UBERON:0000956,3.77e-09,21;UBERON:0001869,3.77e-09,21;UBERON:0000203,3.77e-09,21;UBERON:0002780,4.75e-09,39;UBERON:0001890,4.75e-09,39;UBERON:0006240,4.75e-09,39;UBERON:0003056,5.43e-09,49;UBERON:0010371,7.56e-09,73;UBERON:0004121,2.31e-08,95;UBERON:0000924,2.31e-08,95;UBERON:0006601,2.31e-08,95;UBERON:0002619,2.72e-08,17;UBERON:0007023,3.38e-07,51
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0,1.54947988129892,0,0.70219357896598,0,0,0.342401459862411,0.174840804837995,0.666219523631325,1.41732687172878,0,1.57731082679119,2.60517423850904,6.79023442876848,1.02051948181284,0,0,0.159992422793407,0,0,0,0,0,0,0.221730510655305,0,0,0,0.288851619751275,0.498703936075477,0,11.7188856606334,10.1573594788094,12.5645698553712,21.7645650571475,18.442228093878,14.5653105909346,0,0,0,0,0.872100625521786,0.439372365468944,0.388859798148567,0.139986421625363,0,2.18117387875057,0,0.336093799142464,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.599200221036809,1.53687322128622,2.28117147078651,0.675029691658453,0.630974884054146,1.42825492201902,0.441737081903227,0.857435594504678,1.0543001812006,0.919218786610021,1.10115880999389,2.55374676170375,2.15049146558741,0.791317726381163,0.457438218012048,0,3.07101298901519,1.68828783009504,2.13917546887534,0.883885756421003,0.996601765593721,0.559198337475902,0.075726193333184,0,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,1.03575153458869,0.148442139064825,0,0,0,0.301445281105245,0.23517741427141,0.376999773989026,0,0.433798070759735,2.65383165584962,0.161766849947409,1.76673214768315,0.969750506270444,1.86391761218122,10.5401086924157,13.823482649688,0.255457055208591,0.11981512450592,0,0,1.64769703345305,1.83000241127451,0.879580464790051,3.99795936442236,6.13717097592793,2.28566849015516,3.24482526135515,0,1.36847667671102,0.252722758433675,3.15662783829711,0,0.229902104433473,0.180062129805349,0.150704817835715,0.272145996605311,0,0.0937017245597288,1.55222022443409,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0.51469581422943,0.284163499395593,0.207125772535502,0,0.180062061461015,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0,0.134206418760372,1.89260953707715,0.308713837137853,0.330418782983798,0,0,0,0.257734922644187,1.00841762311671,0.22237804384487,0.190225626112559,0.474529061544512,0,0.251335208800269,0.596869416123452,0.974820435595601,0,0.648414149624083,0.597423819763102,0,0.228497025219458,0,0,0.775809948670503,0.210407459670956,0.505892296994058,0.885660887877613,1.09899109488962,0.616985819609003,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.575392274901621,0.486405680325106,0.274561413188081,0,0,0.312037673114561,0,0,0.482443521363367,1.66277871149944,0.189491411770485,0.488894929326078,0.339490171550376,0.234690248288502,0.502518772325447,0.476087281772027,0.975668239288994,1.26108115284953,0.8858587585951,1.11618338060241,0.983179888294428,1.20879487306127,1.44649058581512,0,0,0.491764273019036,0.551873492609465,2.0871576698413,3.16471553798949,0,0,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,1.28528526568723,0,0,0.162886959353576,0.494910368917606,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.388076051348264,0.428674070063185,0.532020700926821,0.178368817602071,0.329098041204242,0.608929898229199,0,0,1.10264199027481,0.65954501176592,0.322928853391811,0.422190474497091,0.477489376012546,0.164140899745061,0.291480836629851,4.26478194624172,1.19609616558497,0.82554747185289,1.66675074632741,0.188368457004691,0.410082683163076,0.915112692826091,0.169978429993855,0,0.414599921413271,1.90934123603023,0.474503990371703,0.406638934253697,0.432021363287205,0.418176592028937,0.218362563746178,0.269728692769641,0.495920734352016,1.30877970992015,0.648074866458964,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0.516639293910924,0,0.234714477291508,0.13020438484395,0,0,0.288030006257865,0,0.405450430580328,0,0.25984164595559,0.358053391334963,0.596044064343795,0.240390899039938,0.443068581523732,0,0.15241361331,0.201652370273681,0.38983152295901,0.0962118416403295,0.467507608726276,0.226730383615211,0.665957860122194,0,0.335769232728157,1.54551675225752,0,0,0.428736758158132,0,1.12950368523413,2.30162618253588,1.14579102687879,2.749650917499,0.685082519770642,3.0215755895588,4.72515750162264,3.60256962579376,3.17199686288943,6.21312374102184,0,1.19707462020309,0.341467211508268,0.486213434136588,0,0,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0,0.37456602987953,0.256100609619477,0.402048282689293,0,0.347652977834566,0.578727661391115,0,0.588795680537589,0,0.177475806159338,0,0.436039249896986,0.470546902076653,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.492522411877817,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.935726433781634,0.214871054048298,0.382576664137687,0,0.463735671240843
|short_description=p4@Sorl1
}}

Revision as of 17:50, 14 September 2013

Short description:p4@Sorl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sorl1_5end
Coexpression cluster:MCL_coexpression_mm9:552
Association with transcript: 13bp_to_NM_011436, uc009pap.1_5end
EntrezGene:Sorl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sorl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.18
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B210.54
cerebellum, neonate N30.CNhs11135.1395-42I213.82
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D54.00
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C22.09
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.01e-1454
brain1.45e-1347
future brain1.45e-1347
neural tube6.23e-1352
neural rod6.23e-1352
future spinal cord6.23e-1352
neural keel6.23e-1352
regional part of brain8.21e-1346
central nervous system2.06e-1173
neurectoderm3.68e-1164
neural plate3.68e-1164
presumptive neural plate3.68e-1164
occipital lobe5.08e-1110
visual cortex5.08e-1110
neocortex5.08e-1110
nervous system6.97e-1175
brain grey matter1.11e-1029
regional part of telencephalon1.11e-1029
telencephalon1.11e-1029
anterior neural tube8.46e-1040
gray matter1.45e-0934
cerebral cortex3.77e-0921
cerebral hemisphere3.77e-0921
pallium3.77e-0921
regional part of forebrain4.75e-0939
forebrain4.75e-0939
future forebrain4.75e-0939
pre-chordal neural plate5.43e-0949
ecto-epithelium7.56e-0973
ectoderm-derived structure2.31e-0895
ectoderm2.31e-0895
presumptive ectoderm2.31e-0895
regional part of cerebral cortex2.72e-0817
adult organism3.38e-0751







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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