FFCP PHASE1:Mm9::chr18:74938844..74938853,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=52538|HGNC=|UniProt=Q8BWT1|association_with_transcript=0bp_to_ENSMUST00000041053_5end|description=CAGE_peak_3_at_Acaa2_5end|id=chr18:74938844..74938853,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!5.37e-10!47;UBERON:0007100!5.24e-07!18;UBERON:0000948!5.24e-07!18;UBERON:0005498!5.24e-07!18;UBERON:0004140!5.24e-07!18;UBERON:0009881!5.24e-07!18;UBERON:0004141!5.24e-07!18;UBERON:0003084!5.24e-07!18;UBERON:0007005!5.24e-07!18;UBERON:0004139!5.24e-07!18;UBERON:0004291!5.24e-07!18;UBERON:0004535!8.49e-07!23;UBERON:0001009!8.49e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.23e-10,47;UBERON:0007100,5.16e-07,18;UBERON:0000948,5.16e-07,18;UBERON:0005498,5.16e-07,18;UBERON:0004140,5.16e-07,18;UBERON:0009881,5.16e-07,18;UBERON:0004141,5.16e-07,18;UBERON:0003084,5.16e-07,18;UBERON:0007005,5.16e-07,18;UBERON:0004139,5.16e-07,18;UBERON:0004291,5.16e-07,18;UBERON:0004535,8.36e-07,23;UBERON:0001009,8.36e-07,23|phase1_expression=4.16387002472464,6.63053274514786,3.63999391511629,3.62957053568196,3.00537437967808,4.36486106970913,3.73780224952841,5.03580961422147,0.140788722151667,0,0.856089841127525,1.03703806693937,3.0816131387617,5.85716696207283,3.66420737997229,3.03712901084739,6.29605690315332,3.62781490161973,2.33094537129756,5.51706547337439,1.87095238332354,2.08510997521859,3.6567970479451,5.75972722056264,6.42345986988076,2.29692785646008,6.8921919385452,6.24866574789078,9.12112413390595,8.06496415231778,5.09980174507201,1.27006134691926,0.61506478758457,0,5.77703239502549,7.64679368649065,5.51257261908397,6.27797446105362,6.2506827561904,5.75876118371178,5.88231488031014,4.78131839470912,7.76816564849846,3.9028013572429,3.24406179902447,2.75320128242522,7.04152209913235,2.18025156380447,3.29529274101708,2.13872888981712,1.67983705950435,7.18762821824858,2.68452169692378,5.07753499407941,4.03312558970957,3.08711323243136,1.71920063963254,4.64104883049698,0.404632921719196,1.05798195854407,0.633831403506179,3.04960078862219,0,2.6996991518442,0,0.7104801149461,0,1.15265491596466,1.14058573539325,1.08004750665353,0.841299845405528,1.14260393761521,1.54607978666129,0.244981598429908,0.575072826109418,0.919218786610021,0,0.510749352340751,1.22885226604995,0.395658863190582,0.365950574409639,1.56274011167028,0.558365998002762,2.8138130501584,1.37518422999129,1.47314292736834,0.569486723196412,0.559198337475902,1.81742863999642,3.47629176491213,5.79728977403356,5.16254326188832,4.75979933595425,6.47643829965381,2.59910566979068,3.58421509677868,3.23022166303029,4.26075806445144,4.67614808285164,3.5333957451034,5.49289337129054,5.13305909657271,0,0,1.94841936910093,1.52015919285059,3.53867111510348,5.48082622651488,3.36619248741323,7.12522267511159,3.29622120855658,5.48037860961854,5.07354093963329,6.17962826265753,5.76184664964954,8.16832843642891,1.73036477414062,12.4355446951124,0.884610551949874,9.05894359705491,4.19598885074748,3.39412677194655,7.45567044872489,0.585561594023094,1.25668024088073,8.9409969323007,5.51149572727233,8.39863823390771,4.82866862877646,1.64769703345305,1.37250180845588,1.63350657746724,1.21677024134594,0.767146371990992,0.62336413367868,1.78465389374533,4.48093200941392,4.60305791257344,3.79084137650512,5.47148825304832,1.69156575851515,2.06911893990126,1.62055916824814,1.05493372485001,1.36072998302656,1.7935920839879,2.52994656311268,3.10444044886819,2.37124792226126,1.70195472151037,1.05570674498369,2.41115305670332,5.00485048606076,2.78601733217733,3.2925141825271,2.9855140022774,8.42655824775882,3.60287069960601,3.9782889915383,4.55676699578104,5.8631514995274,5.22179978236943,4.97163944728941,9.83821158737019,9.87309522479221,9.76642567951713,7.51165523918934,13.6615450569588,13.8230273927324,14.7750717671186,13.7816976227955,16.0819986167866,10.5384055339704,15.5679445762031,2.94405927989778,1.9551876352064,4.62586296177317,7.66906643324278,3.41261200856374,1.62565670302307,1.80414445850931,2.42020229548011,3.55804870151792,6.08722003560189,8.0669940462567,7.41145296258049,8.29406189040889,7.16243299348143,6.43381487493096,8.08937467788799,5.18731319699266,5.97423819763102,3.60369011810855,2.62771579002376,0,4.48032921259691,3.10323979468201,3.92760591385784,3.98390183882821,8.11855813887812,5.80895293013087,8.26760998276064,8.59712618552732,3.33690211432188,3.14494392181125,4.04751802292737,4.86864291332407,2.894125917029,4.07401362850272,6.61701116136864,4.86405680325106,8.23684239564244,11.5014565221884,10.7920874823866,9.67316786655138,5.80931419278357,6.99649912735457,9.16642690590398,4.98833613449833,2.08440552947533,1.79261474086228,2.20668611507745,2.11221223459652,4.02015017860358,4.28478553594825,4.29294025287157,5.35959489961049,5.3151525515706,4.30527875375215,4.42430949732493,5.35323443784276,6.219909519005,3.01582567878545,6.52686820582452,4.42587845717133,4.13905119457099,2.72936002979246,1.87538698547525,3.2786989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| ||
|EntrezGene=52538 | |||
|HGNC= | |||
|UniProt=Q8BWT1 | |||
|association_with_transcript=0bp_to_ENSMUST00000041053_5end | |||
|description=CAGE_peak_3_at_Acaa2_5end | |||
|id=chr18:74938844..74938853,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.37e-10!47;UBERON:0007100!5.24e-07!18;UBERON:0000948!5.24e-07!18;UBERON:0005498!5.24e-07!18;UBERON:0004140!5.24e-07!18;UBERON:0009881!5.24e-07!18;UBERON:0004141!5.24e-07!18;UBERON:0003084!5.24e-07!18;UBERON:0007005!5.24e-07!18;UBERON:0004139!5.24e-07!18;UBERON:0004291!5.24e-07!18;UBERON:0004535!8.49e-07!23;UBERON:0001009!8.49e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.23e-10,47;UBERON:0007100,5.16e-07,18;UBERON:0000948,5.16e-07,18;UBERON:0005498,5.16e-07,18;UBERON:0004140,5.16e-07,18;UBERON:0009881,5.16e-07,18;UBERON:0004141,5.16e-07,18;UBERON:0003084,5.16e-07,18;UBERON:0007005,5.16e-07,18;UBERON:0004139,5.16e-07,18;UBERON:0004291,5.16e-07,18;UBERON:0004535,8.36e-07,23;UBERON:0001009,8.36e-07,23 | |||
|phase1_expression=4.16387002472464,6.63053274514786,3.63999391511629,3.62957053568196,3.00537437967808,4.36486106970913,3.73780224952841,5.03580961422147,0.140788722151667,0,0.856089841127525,1.03703806693937,3.0816131387617,5.85716696207283,3.66420737997229,3.03712901084739,6.29605690315332,3.62781490161973,2.33094537129756,5.51706547337439,1.87095238332354,2.08510997521859,3.6567970479451,5.75972722056264,6.42345986988076,2.29692785646008,6.8921919385452,6.24866574789078,9.12112413390595,8.06496415231778,5.09980174507201,1.27006134691926,0.61506478758457,0,5.77703239502549,7.64679368649065,5.51257261908397,6.27797446105362,6.2506827561904,5.75876118371178,5.88231488031014,4.78131839470912,7.76816564849846,3.9028013572429,3.24406179902447,2.75320128242522,7.04152209913235,2.18025156380447,3.29529274101708,2.13872888981712,1.67983705950435,7.18762821824858,2.68452169692378,5.07753499407941,4.03312558970957,3.08711323243136,1.71920063963254,4.64104883049698,0.404632921719196,1.05798195854407,0.633831403506179,3.04960078862219,0,2.6996991518442,0,0.7104801149461,0,1.15265491596466,1.14058573539325,1.08004750665353,0.841299845405528,1.14260393761521,1.54607978666129,0.244981598429908,0.575072826109418,0.919218786610021,0,0.510749352340751,1.22885226604995,0.395658863190582,0.365950574409639,1.56274011167028,0.558365998002762,2.8138130501584,1.37518422999129,1.47314292736834,0.569486723196412,0.559198337475902,1.81742863999642,3.47629176491213,5.79728977403356,5.16254326188832,4.75979933595425,6.47643829965381,2.59910566979068,3.58421509677868,3.23022166303029,4.26075806445144,4.67614808285164,3.5333957451034,5.49289337129054,5.13305909657271,0,0,1.94841936910093,1.52015919285059,3.53867111510348,5.48082622651488,3.36619248741323,7.12522267511159,3.29622120855658,5.48037860961854,5.07354093963329,6.17962826265753,5.76184664964954,8.16832843642891,1.73036477414062,12.4355446951124,0.884610551949874,9.05894359705491,4.19598885074748,3.39412677194655,7.45567044872489,0.585561594023094,1.25668024088073,8.9409969323007,5.51149572727233,8.39863823390771,4.82866862877646,1.64769703345305,1.37250180845588,1.63350657746724,1.21677024134594,0.767146371990992,0.62336413367868,1.78465389374533,4.48093200941392,4.60305791257344,3.79084137650512,5.47148825304832,1.69156575851515,2.06911893990126,1.62055916824814,1.05493372485001,1.36072998302656,1.7935920839879,2.52994656311268,3.10444044886819,2.37124792226126,1.70195472151037,1.05570674498369,2.41115305670332,5.00485048606076,2.78601733217733,3.2925141825271,2.9855140022774,8.42655824775882,3.60287069960601,3.9782889915383,4.55676699578104,5.8631514995274,5.22179978236943,4.97163944728941,9.83821158737019,9.87309522479221,9.76642567951713,7.51165523918934,13.6615450569588,13.8230273927324,14.7750717671186,13.7816976227955,16.0819986167866,10.5384055339704,15.5679445762031,2.94405927989778,1.9551876352064,4.62586296177317,7.66906643324278,3.41261200856374,1.62565670302307,1.80414445850931,2.42020229548011,3.55804870151792,6.08722003560189,8.0669940462567,7.41145296258049,8.29406189040889,7.16243299348143,6.43381487493096,8.08937467788799,5.18731319699266,5.97423819763102,3.60369011810855,2.62771579002376,0,4.48032921259691,3.10323979468201,3.92760591385784,3.98390183882821,8.11855813887812,5.80895293013087,8.26760998276064,8.59712618552732,3.33690211432188,3.14494392181125,4.04751802292737,4.86864291332407,2.894125917029,4.07401362850272,6.61701116136864,4.86405680325106,8.23684239564244,11.5014565221884,10.7920874823866,9.67316786655138,5.80931419278357,6.99649912735457,9.16642690590398,4.98833613449833,2.08440552947533,1.79261474086228,2.20668611507745,2.11221223459652,4.02015017860358,4.28478553594825,4.29294025287157,5.35959489961049,5.3151525515706,4.30527875375215,4.42430949732493,5.35323443784276,6.219909519005,3.01582567878545,6.52686820582452,4.42587845717133,4.13905119457099,2.72936002979246,1.87538698547525,3.27869890753351,14.1383719234449,2.2085575359138,1.95219372148319,0.861693590931196,0.955875191810208,1.11399337041197,1.13230612315533,0,1.46127928955656,1.97643888973262,1.28528526568723,3.26462195979018,4.45164009168138,3.25773918707152,3.13443233647817,3.98235415019888,3.64170954232472,3.93020624054176,4.33791683438566,3.2483208216885,2.45948118355142,2.32585463851399,4.72593848320757,6.06045543254026,2.52829406348653,4.21674434299995,3.09406629744561,1.70219802876894,3.06103859853227,1.55230420539305,1.92903331528433,1.24138163549592,2.49716344642899,3.29098041204242,2.74018454203139,1.40803024838226,1.27099242518292,4.85162475720916,3.2977250588296,5.32832608096488,2.89502039655148,5.13301079213487,4.76008609260678,7.86998258900597,1.66882771809459,2.22132145037209,4.54051109519089,2.03713980106683,3.39063222608444,4.37421528707281,3.43167259809784,2.54967644990783,3.63873776041511,2.21119958087078,6.68269432610579,2.53068794864908,3.45643094115643,3.13215488383224,2.92723614420256,3.49380101993884,5.25970950900801,6.4469695465762,9.16145796944104,9.46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| |||
|short_description=p3@Acaa2 | |||
}} |
Revision as of 16:44, 13 September 2013
Short description: | p3@Acaa2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Acaa2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000041053_5end |
EntrezGene: | Acaa2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 5.23e-10 | 47 |
primary circulatory organ | 5.16e-07 | 18 |
heart | 5.16e-07 | 18 |
primitive heart tube | 5.16e-07 | 18 |
primary heart field | 5.16e-07 | 18 |
anterior lateral plate mesoderm | 5.16e-07 | 18 |
heart tube | 5.16e-07 | 18 |
heart primordium | 5.16e-07 | 18 |
cardiac mesoderm | 5.16e-07 | 18 |
cardiogenic plate | 5.16e-07 | 18 |
heart rudiment | 5.16e-07 | 18 |
cardiovascular system | 8.36e-07 | 23 |
circulatory system | 8.36e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.