FFCP PHASE1:Mm9::chr16:49854460..49854472,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=272|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:49854460..49854472,+|id=chr16:49854460..49854472,+|ontology_enrichment_celltype=CL:0000988!1.04e-16!32;CL:0002032!1.04e-16!32;CL:0000037!1.04e-16!32;CL:0000566!1.04e-16!32;CL:0000837!1.04e-16!32;CL:0000838!5.96e-13!12;CL:0002320!7.27e-12!46;CL:0000134!7.27e-12!46;CL:0000542!1.03e-11!13;CL:0000051!1.03e-11!13;CL:0000084!1.03e-11!11;CL:0000827!1.03e-11!11;CL:0002031!1.01e-10!25;CL:0000738!6.85e-10!17;CL:0002087!6.85e-10!17;CL:0000219!4.54e-09!54;CL:0000791!6.21e-09!9;CL:0000789!6.21e-09!9;CL:0002420!6.21e-09!9;CL:0002419!6.21e-09!9;CL:0000790!6.21e-09!9;CL:0000893!6.72e-08!6;CL:0002489!6.72e-08!6;CL:0000898!6.72e-08!6;CL:0000809!6.72e-08!6;CL:0000810!6.72e-08!6;CL:0000895!6.72e-08!6;CL:0000808!6.72e-08!6;CL:0000894!6.72e-08!6;CL:0000806!6.72e-08!6;CL:0000807!6.72e-08!6;CL:0000805!6.72e-08!6;CL:0002425!6.72e-08!6;CL:0002436!6.72e-08!6;CL:0002427!6.72e-08!6;CL:0002428!6.72e-08!6;CL:0002429!6.72e-08!6;CL:0002433!6.72e-08!6;CL:0002431!6.72e-08!6;CL:0002432!6.72e-08!6;CL:0000624!1.04e-07!8;CL:0000049!5.17e-07!19;CL:0000063!6.00e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,7.33e-16,32;CL:0002032,7.33e-16,32;CL:0000037,7.33e-16,32;CL:0000837,7.33e-16,32;CL:0002320,1.56e-10,46;CL:0000134,1.56e-10,46;CL:0000034,4.76e-10,97;CL:0000838,1.04e-09,12;CL:0000542,5.99e-09,13;CL:0000051,5.99e-09,13;CL:0000219,1.00e-08,54;CL:0000049,3.04e-08,19;CL:0000084,3.66e-07,11;CL:0000827,3.66e-07,11;CL:0000738,8.47e-07,17;CL:0002087,8.47e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.14e-07,3;DOID:4045,3.14e-07,3|ontology_enrichment_uberon=UBERON:0002193!9.44e-23!48;UBERON:0002390!4.43e-20!45;UBERON:0003061!4.43e-20!45;UBERON:0002405!3.39e-17!70;UBERON:0002370!4.00e-16!23;UBERON:0000974!4.00e-16!23;UBERON:0004807!4.00e-16!23;UBERON:0005058!4.00e-16!23;UBERON:0003351!4.00e-16!23;UBERON:0009113!4.00e-16!23;UBERON:0003295!4.00e-16!23;UBERON:0009722!4.00e-16!23;UBERON:0005562!4.00e-16!23;UBERON:0007690!4.00e-16!23;UBERON:0004177!7.64e-16!29;UBERON:0006562!3.22e-15!24;UBERON:0003408!3.22e-15!24;UBERON:0001557!3.22e-15!24;UBERON:0001042!3.22e-15!24;UBERON:0008814!3.22e-15!24;UBERON:0009145!3.22e-15!24;UBERON:0000072!6.49e-13!27;UBERON:0002384!7.27e-12!46;UBERON:0005057!2.62e-10!51;UBERON:0003081!7.03e-09!88;UBERON:0000063!9.25e-09!35;UBERON:0000065!1.94e-08!41;UBERON:0001004!4.14e-08!42;UBERON:0003929!9.47e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.56e-10,46|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.703943610758334,1.40438715793196,0.34243593645101,0.239316476986009,0.684802919724823,0.699363219351979,0,0.202475267389826,0,0.630924330716475,0.959801035240171,0.42438965179803,0,4.0709289992363,7.05239430675126,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0.570070258369122,0,0.443461021310609,0,0,0,0,0,0,2.09265815368454,0,2.61761871986899,1.76469446409304,0,2.91306211818692,0,0,0,0,0,0,0,0,0,1.17447824240415,0,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,2.39630249011841,1.19980546198682,2.1601938602421,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,1.02939162845886,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0.648540907100142,0.549122826376163,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0,5.94924504978494,4.3384950220334,4.00779924032829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.924398614483445,0.51968329191118,0,0.993406773906324,0.480781798079875,0.443068581523732,0.201932899896295,0.304827226619999,0.201652370273681,0.38983152295901,0.384847366561318,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr16:49854460..49854472,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=272 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:49854460..49854472,+ | |||
|id=chr16:49854460..49854472,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.04e-16!32;CL:0002032!1.04e-16!32;CL:0000037!1.04e-16!32;CL:0000566!1.04e-16!32;CL:0000837!1.04e-16!32;CL:0000838!5.96e-13!12;CL:0002320!7.27e-12!46;CL:0000134!7.27e-12!46;CL:0000542!1.03e-11!13;CL:0000051!1.03e-11!13;CL:0000084!1.03e-11!11;CL:0000827!1.03e-11!11;CL:0002031!1.01e-10!25;CL:0000738!6.85e-10!17;CL:0002087!6.85e-10!17;CL:0000219!4.54e-09!54;CL:0000791!6.21e-09!9;CL:0000789!6.21e-09!9;CL:0002420!6.21e-09!9;CL:0002419!6.21e-09!9;CL:0000790!6.21e-09!9;CL:0000893!6.72e-08!6;CL:0002489!6.72e-08!6;CL:0000898!6.72e-08!6;CL:0000809!6.72e-08!6;CL:0000810!6.72e-08!6;CL:0000895!6.72e-08!6;CL:0000808!6.72e-08!6;CL:0000894!6.72e-08!6;CL:0000806!6.72e-08!6;CL:0000807!6.72e-08!6;CL:0000805!6.72e-08!6;CL:0002425!6.72e-08!6;CL:0002436!6.72e-08!6;CL:0002427!6.72e-08!6;CL:0002428!6.72e-08!6;CL:0002429!6.72e-08!6;CL:0002433!6.72e-08!6;CL:0002431!6.72e-08!6;CL:0002432!6.72e-08!6;CL:0000624!1.04e-07!8;CL:0000049!5.17e-07!19;CL:0000063!6.00e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.33e-16,32;CL:0002032,7.33e-16,32;CL:0000037,7.33e-16,32;CL:0000837,7.33e-16,32;CL:0002320,1.56e-10,46;CL:0000134,1.56e-10,46;CL:0000034,4.76e-10,97;CL:0000838,1.04e-09,12;CL:0000542,5.99e-09,13;CL:0000051,5.99e-09,13;CL:0000219,1.00e-08,54;CL:0000049,3.04e-08,19;CL:0000084,3.66e-07,11;CL:0000827,3.66e-07,11;CL:0000738,8.47e-07,17;CL:0002087,8.47e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.14e-07,3;DOID:4045,3.14e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!9.44e-23!48;UBERON:0002390!4.43e-20!45;UBERON:0003061!4.43e-20!45;UBERON:0002405!3.39e-17!70;UBERON:0002370!4.00e-16!23;UBERON:0000974!4.00e-16!23;UBERON:0004807!4.00e-16!23;UBERON:0005058!4.00e-16!23;UBERON:0003351!4.00e-16!23;UBERON:0009113!4.00e-16!23;UBERON:0003295!4.00e-16!23;UBERON:0009722!4.00e-16!23;UBERON:0005562!4.00e-16!23;UBERON:0007690!4.00e-16!23;UBERON:0004177!7.64e-16!29;UBERON:0006562!3.22e-15!24;UBERON:0003408!3.22e-15!24;UBERON:0001557!3.22e-15!24;UBERON:0001042!3.22e-15!24;UBERON:0008814!3.22e-15!24;UBERON:0009145!3.22e-15!24;UBERON:0000072!6.49e-13!27;UBERON:0002384!7.27e-12!46;UBERON:0005057!2.62e-10!51;UBERON:0003081!7.03e-09!88;UBERON:0000063!9.25e-09!35;UBERON:0000065!1.94e-08!41;UBERON:0001004!4.14e-08!42;UBERON:0003929!9.47e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.56e-10,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,0.703943610758334,1.40438715793196,0.34243593645101,0.239316476986009,0.684802919724823,0.699363219351979,0,0.202475267389826,0,0.630924330716475,0.959801035240171,0.42438965179803,0,4.0709289992363,7.05239430675126,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0.570070258369122,0,0.443461021310609,0,0,0,0,0,0,2.09265815368454,0,2.61761871986899,1.76469446409304,0,2.91306211818692,0,0,0,0,0,0,0,0,0,1.17447824240415,0,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,2.39630249011841,1.19980546198682,2.1601938602421,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,1.02939162845886,1.13665399758237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0.648540907100142,0.549122826376163,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0,5.94924504978494,4.3384950220334,4.00779924032829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.405450430580328,0.924398614483445,0.51968329191118,0,0.993406773906324,0.480781798079875,0.443068581523732,0.201932899896295,0.304827226619999,0.201652370273681,0.38983152295901,0.384847366561318,1.40252282617883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:49854460..49854472,+ | |||
}} |
Revision as of 12:51, 13 September 2013
Short description: | p@chr16:49854460..49854472, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:49854460..49854472, + |
Coexpression cluster: | MCL_coexpression_mm9:272 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.33e-16 | 32 |
hematopoietic oligopotent progenitor cell | 7.33e-16 | 32 |
hematopoietic stem cell | 7.33e-16 | 32 |
hematopoietic multipotent progenitor cell | 7.33e-16 | 32 |
connective tissue cell | 1.56e-10 | 46 |
mesenchymal cell | 1.56e-10 | 46 |
stem cell | 4.76e-10 | 97 |
lymphoid lineage restricted progenitor cell | 1.04e-09 | 12 |
lymphocyte | 5.99e-09 | 13 |
common lymphoid progenitor | 5.99e-09 | 13 |
motile cell | 1.00e-08 | 54 |
common myeloid progenitor | 3.04e-08 | 19 |
T cell | 3.66e-07 | 11 |
pro-T cell | 3.66e-07 | 11 |
leukocyte | 8.47e-07 | 17 |
nongranular leukocyte | 8.47e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.56e-10 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.14e-07 | 3 |
muscle cancer | 3.14e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.