FFCP PHASE1:Mm9::chr5:33560878..33560892,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100689|HGNC=|MCL_coexpression_id=214|UniProt=Q8BMS2|association_with_transcript=0bp_to_ENSMUST00000046186,NM_133903,uc008xai.2_5end|description=CAGE_peak_2_at_Spon2_5end|id=chr5:33560878..33560892,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.35e-09!18;UBERON:0000948!7.35e-09!18;UBERON:0005498!7.35e-09!18;UBERON:0004140!7.35e-09!18;UBERON:0009881!7.35e-09!18;UBERON:0004141!7.35e-09!18;UBERON:0003084!7.35e-09!18;UBERON:0007005!7.35e-09!18;UBERON:0004139!7.35e-09!18;UBERON:0004291!7.35e-09!18;UBERON:0004872!1.24e-08!33;UBERON:0004535!2.11e-08!23;UBERON:0001009!2.11e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.18e-12,18;UBERON:0000948,2.18e-12,18;UBERON:0005498,2.18e-12,18;UBERON:0004140,2.18e-12,18;UBERON:0009881,2.18e-12,18;UBERON:0004141,2.18e-12,18;UBERON:0003084,2.18e-12,18;UBERON:0007005,2.18e-12,18;UBERON:0004139,2.18e-12,18;UBERON:0004291,2.18e-12,18;UBERON:0004872,2.95e-10,33;UBERON:0004535,3.88e-10,23;UBERON:0001009,3.88e-10,23|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,1.39912375625629,0,0,0,0.935476191661768,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.377690453926732,0.304130793658544,3.12029478674859,2.34717403304412,0.436050312760893,0,0.388859798148567,0.279972843250725,0,0,0,0,50.4228494630456,10.601737277734,7.21940929188419,0,0,0,1.35537812827653,5.33576877666684,0,0,0,3.89480143673926,2.68952813725088,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,3.40860645156115,3.37721805983729,1.41335829804136,0,2.56652954828636,2.54805239706646,0,0.216491041011214,0.760079596425296,0,0.34255163915718,0,0,0.520455980298408,0,0.230615497256059,0.301445281105245,0.23517741427141,0.628332956648377,0.247194967734374,0.144599356919912,0.884610551949874,0.970601099684455,0.441683036920787,1.45462575940567,3.72783522436244,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.2220723662038,1.11966273549084,0,0.210441855886474,0,0,0.180062129805349,0,0.204109497453984,1.0249097622788,0.655912071918102,0.258703370739016,0,0.189106080167819,0,0.219195732427575,1.11218899690239,2.089512999133,2.88094990971121,0.199034266818493,0,0,0,1.44988040774851,2.57978665979206,1.98068267607116,2.84093682702252,1.37734962223183,2.00547246753592,1.62773761325285,2.41446061259657,0.350296027101508,3.29119699826961,2.62667942526552,0.324275238183423,1.16959989940266,1.75640092232841,1.34206418760372,0,0.102904612379284,0,0.528901133327089,0.426576501070468,0.232236671860439,0.77320476793256,0.605050573870028,0.889512175379481,0.760902504450237,4.2707615539006,0.823494773620054,2.5133520880027,1.79060824837036,1.75467678407208,1.79763881730844,4.10662294761919,1.7922714592893,0.189667900953082,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0.296452627087149,0,0,0.449724224769707,1.01430060694251,0.964708639009667,2.5462585178142,1.72617682470486,0.486405680325106,1.09824565275233,1.43768206527355,0.744281895337007,0.936113019343682,0.252578877947112,0.538192240565737,0,0.369506380333209,0.757965647081939,0,0.169745085775188,0,2.01007508930179,0.952174563544055,2.14647012643579,3.15270288212382,4.65075848262427,5.42146213435456,0.81931657357869,7.25276923836761,3.61622646453779,0,0,1.47529281905711,1.37968373152366,0,0,6.55739781506702,1.51482556322624,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,1.56134093729095,3.38324646967785,1.14020871547503,1.31976098378028,0,0,0,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.632073515871632,1.05418608574999,0,0,0.18006109403131,0,0,0.354680467284547,0.713475270408282,0.329098041204242,0.304464949114599,0.23467170806371,0,0.661585194164886,0.16488625294148,0.322928853391811,0.603129249281559,0.835606408021955,0.656563598980245,2.62332752966866,0.18542530201051,0,2.88941615148511,2.40752885580625,0.376736914009382,0.546776910884101,1.14389086603261,0,0,0,0,0,0.609958401380546,1.08005340821801,1.67270636811575,2.18362563746178,1.21377911746339,1.81837602595739,2.87931536182433,2.20345454596048,0.621339313086926,0,0.149516546043979,0,0.388902376688095,0.387479470433193,0.337912250981556,0.352071715937262,0.781226309063701,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.443068581523732,0,0.381034033274999,0,0.194915761479505,0.288635524920988,0,0.226730383615211,0,0,0,2.70465431645067,1.12609485270709,6.22715522508701,1.71494703263253,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0.551530525350042,0.44449345560323,0.824140228955577,0.64183841918363,1.51618327058278,0,0.754505365544305,2.24739617927718,1.53660365771686,1.60819313075717,0,0.463537303779422,0.964546102318525,0.8241718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| ||
|EntrezGene=100689 | |||
|HGNC= | |||
|MCL_coexpression_id=214 | |||
|UniProt=Q8BMS2 | |||
|association_with_transcript=0bp_to_ENSMUST00000046186,NM_133903,uc008xai.2_5end | |||
|description=CAGE_peak_2_at_Spon2_5end | |||
|id=chr5:33560878..33560892,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.35e-09!18;UBERON:0000948!7.35e-09!18;UBERON:0005498!7.35e-09!18;UBERON:0004140!7.35e-09!18;UBERON:0009881!7.35e-09!18;UBERON:0004141!7.35e-09!18;UBERON:0003084!7.35e-09!18;UBERON:0007005!7.35e-09!18;UBERON:0004139!7.35e-09!18;UBERON:0004291!7.35e-09!18;UBERON:0004872!1.24e-08!33;UBERON:0004535!2.11e-08!23;UBERON:0001009!2.11e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.18e-12,18;UBERON:0000948,2.18e-12,18;UBERON:0005498,2.18e-12,18;UBERON:0004140,2.18e-12,18;UBERON:0009881,2.18e-12,18;UBERON:0004141,2.18e-12,18;UBERON:0003084,2.18e-12,18;UBERON:0007005,2.18e-12,18;UBERON:0004139,2.18e-12,18;UBERON:0004291,2.18e-12,18;UBERON:0004872,2.95e-10,33;UBERON:0004535,3.88e-10,23;UBERON:0001009,3.88e-10,23 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,1.39912375625629,0,0,0,0.935476191661768,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0.377690453926732,0.304130793658544,3.12029478674859,2.34717403304412,0.436050312760893,0,0.388859798148567,0.279972843250725,0,0,0,0,50.4228494630456,10.601737277734,7.21940929188419,0,0,0,1.35537812827653,5.33576877666684,0,0,0,3.89480143673926,2.68952813725088,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.280888840263504,3.40860645156115,3.37721805983729,1.41335829804136,0,2.56652954828636,2.54805239706646,0,0.216491041011214,0.760079596425296,0,0.34255163915718,0,0,0.520455980298408,0,0.230615497256059,0.301445281105245,0.23517741427141,0.628332956648377,0.247194967734374,0.144599356919912,0.884610551949874,0.970601099684455,0.441683036920787,1.45462575940567,3.72783522436244,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.2220723662038,1.11966273549084,0,0.210441855886474,0,0,0.180062129805349,0,0.204109497453984,1.0249097622788,0.655912071918102,0.258703370739016,0,0.189106080167819,0,0.219195732427575,1.11218899690239,2.089512999133,2.88094990971121,0.199034266818493,0,0,0,1.44988040774851,2.57978665979206,1.98068267607116,2.84093682702252,1.37734962223183,2.00547246753592,1.62773761325285,2.41446061259657,0.350296027101508,3.29119699826961,2.62667942526552,0.324275238183423,1.16959989940266,1.75640092232841,1.34206418760372,0,0.102904612379284,0,0.528901133327089,0.426576501070468,0.232236671860439,0.77320476793256,0.605050573870028,0.889512175379481,0.760902504450237,4.2707615539006,0.823494773620054,2.5133520880027,1.79060824837036,1.75467678407208,1.79763881730844,4.10662294761919,1.7922714592893,0.189667900953082,0,0,0,0,0,0.126473074248515,0,0,0.123397163921801,0.296452627087149,0,0,0.449724224769707,1.01430060694251,0.964708639009667,2.5462585178142,1.72617682470486,0.486405680325106,1.09824565275233,1.43768206527355,0.744281895337007,0.936113019343682,0.252578877947112,0.538192240565737,0,0.369506380333209,0.757965647081939,0,0.169745085775188,0,2.01007508930179,0.952174563544055,2.14647012643579,3.15270288212382,4.65075848262427,5.42146213435456,0.81931657357869,7.25276923836761,3.61622646453779,0,0,1.47529281905711,1.37968373152366,0,0,6.55739781506702,1.51482556322624,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,1.56134093729095,3.38324646967785,1.14020871547503,1.31976098378028,0,0,0,0,0,0.307435147943927,0.775284879504663,0.363533729477506,0,0.632073515871632,1.05418608574999,0,0,0.18006109403131,0,0,0.354680467284547,0.713475270408282,0.329098041204242,0.304464949114599,0.23467170806371,0,0.661585194164886,0.16488625294148,0.322928853391811,0.603129249281559,0.835606408021955,0.656563598980245,2.62332752966866,0.18542530201051,0,2.88941615148511,2.40752885580625,0.376736914009382,0.546776910884101,1.14389086603261,0,0,0,0,0,0.609958401380546,1.08005340821801,1.67270636811575,2.18362563746178,1.21377911746339,1.81837602595739,2.87931536182433,2.20345454596048,0.621339313086926,0,0.149516546043979,0,0.388902376688095,0.387479470433193,0.337912250981556,0.352071715937262,0.781226309063701,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0.389762468933385,0.179026695667481,0.198681354781265,0.120195449519969,0.443068581523732,0,0.381034033274999,0,0.194915761479505,0.288635524920988,0,0.226730383615211,0,0,0,2.70465431645067,1.12609485270709,6.22715522508701,1.71494703263253,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0,0.419226325255965,0.551530525350042,0.44449345560323,0.824140228955577,0.64183841918363,1.51618327058278,0,0.754505365544305,2.24739617927718,1.53660365771686,1.60819313075717,0,0.463537303779422,0.964546102318525,0.824171801606613,0.441596760403192,0.342869252385415,0.70990322463735,0.715308569841963,1.0174249164263,1.12931256498397,0.676916863133412,0.914639864363863,1.05227884575137,0.679020569229309,2.80571135828869,0.830445126869219,0.492522411877817,2.04615521584845,0.619747364743864,0.964533054905707,0.499621155875892,2.33931608445408,0,0.382576664137687,1.54413993383661,0.927471342481686 | |||
|short_description=p2@Spon2 | |||
}} |
Revision as of 07:29, 14 September 2013
Short description: | p2@Spon2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Spon2_5end |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | 0bp_to_ENSMUST00000046186, NM_133903, uc008xai.2_5end |
EntrezGene: | Spon2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.18e-12 | 18 |
heart | 2.18e-12 | 18 |
primitive heart tube | 2.18e-12 | 18 |
primary heart field | 2.18e-12 | 18 |
anterior lateral plate mesoderm | 2.18e-12 | 18 |
heart tube | 2.18e-12 | 18 |
heart primordium | 2.18e-12 | 18 |
cardiac mesoderm | 2.18e-12 | 18 |
cardiogenic plate | 2.18e-12 | 18 |
heart rudiment | 2.18e-12 | 18 |
splanchnic layer of lateral plate mesoderm | 2.95e-10 | 33 |
cardiovascular system | 3.88e-10 | 23 |
circulatory system | 3.88e-10 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.