FFCP PHASE1:Mm9::chr1:12708754..12708834,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=240725|HGNC=|MCL_coexpression_id=214|UniProt=Q8K007|association_with_transcript=128bp_to_ENSMUST00000088585,NM_172294,uc007aic.1,uc007aid.1_5end|description=CAGE_peak_5_at_Sulf1_5end|id=chr1:12708754..12708834,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,2.44e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!8.21e-13!23;UBERON:0001009!8.21e-13!23;UBERON:0007100!2.68e-11!18;UBERON:0000948!2.68e-11!18;UBERON:0005498!2.68e-11!18;UBERON:0004140!2.68e-11!18;UBERON:0009881!2.68e-11!18;UBERON:0004141!2.68e-11!18;UBERON:0003084!2.68e-11!18;UBERON:0007005!2.68e-11!18;UBERON:0004139!2.68e-11!18;UBERON:0004291!2.68e-11!18;UBERON:0005156!2.24e-10!26;UBERON:0000990!2.24e-10!26;UBERON:0003133!1.17e-09!24;UBERON:0004872!1.51e-09!33;UBERON:0001048!3.79e-09!147;UBERON:0000464!1.09e-08!57;UBERON:0000991!5.67e-08!18;UBERON:0005564!5.67e-08!18;UBERON:0003103!7.79e-08!43;UBERON:0004176!1.66e-07!17;UBERON:0009196!1.66e-07!17;UBERON:0009117!1.66e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.59e-17,23;UBERON:0001009,4.59e-17,23;UBERON:0007100,5.61e-15,18;UBERON:0000948,5.61e-15,18;UBERON:0005498,5.61e-15,18;UBERON:0004140,5.61e-15,18;UBERON:0009881,5.61e-15,18;UBERON:0004141,5.61e-15,18;UBERON:0003084,5.61e-15,18;UBERON:0007005,5.61e-15,18;UBERON:0004139,5.61e-15,18;UBERON:0004291,5.61e-15,18;UBERON:0004872,3.02e-13,33;UBERON:0005156,3.15e-13,26;UBERON:0000990,3.15e-13,26;UBERON:0003133,3.06e-12,24;UBERON:0000991,6.50e-10,18;UBERON:0005564,6.50e-10,18;UBERON:0004176,2.80e-09,17;UBERON:0009196,2.80e-09,17;UBERON:0009117,2.80e-09,17;UBERON:0002410,2.44e-08,9;UBERON:0003101,4.08e-08,16;UBERON:0000079,4.08e-08,16;UBERON:0003135,7.30e-08,15;UBERON:0003103,8.54e-08,43;UBERON:0001048,9.64e-08,134;UBERON:0000473,1.20e-07,14;UBERON:0000926,1.73e-07,120;UBERON:0004120,1.73e-07,120;UBERON:0006603,1.73e-07,120|phase1_expression=1.76163731815273,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.01376931219515,1.46837401729345,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,0.839918529752175,0,0,0,0,42.7050663819672,8.30946975822394,7.21940929188419,0.404632921719196,0,0,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0.186399445825301,0,0.377857800533928,6.08715426273523,0.860423876981386,0,0,0,0,0.421333260395256,1.02258193546835,0.519572009205738,1.06001872353102,0.281686839553361,0,0,0,3.68034769719064,4.81383744402687,4.54972000513305,0.22836775943812,4.91981978929626,1.1875371125186,0.346970653532272,0,0.691846491768175,0,1.76383060703557,1.13099932196708,0.247194967734374,6.2177723475562,0,1.29413479957927,0.441683036920787,1.45462575940567,0,0.585561594023094,0.628340120440365,0.510914110417183,0,0,0,0.299581278809645,0,0,0.173824320192276,0,1.0389402227978,0,3.56437773476107,1.11966273549084,1.26361379216837,1.47309299120532,1.82168620147785,0.459804208866946,1.26043490863744,1.65775299619287,1.2246569847239,1.66547836370305,1.03071897015702,3.62184719034622,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,1.4404749548556,3.58261680273288,0,0,0,2.07125772535502,2.57978665979206,2.34080679899319,2.60419209143731,4.13204886669548,4.01094493507183,4.18561100550734,3.48755421819505,3.85325629811659,5.10135534731789,8.04420573987567,10.133601193232,7.89479932096795,8.78200461164202,6.84452735677896,0.210289948564127,0.102904612379284,0.330418782983798,0.528901133327089,0.639864751605702,1.39342003116263,0.644337306610467,0,0,0.190225626112559,0.949058123089023,0.329397909448022,0,0.994782360205754,1.36474860983384,0,0.216138049874694,0.398282546508734,0,0.571242563048644,0,0.407302655690628,0.193952487167626,0.420814919341911,0.632365371242573,0.885660887877613,0.627994911365499,0.370191491765402,0.296452627087149,0,0.589676985339609,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0,0,0.179397413521912,0,7.20537441649758,0.37898282354097,0.325929952884052,0.848725428875941,0.704070744865506,0.837531287209079,0.952174563544055,0.975668239288994,4.25614889086716,4.20782910332672,3.34855014180723,5.24362607090362,6.90739927463582,5.35201516751593,0,0,0.491764273019036,1.10374698521893,1.12385412991454,0.234423373184406,0,3.02965112645248,8.20321370482267,6.24701990874622,10.7711698866399,4.06246956519338,2.89638276307112,2.54768877709949,8.50102473517278,6.42962887404886,3.16230222357219,0.963963949265421,2.12910127812403,1.6025904330053,6.02681749608232,4.45419332025846,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,2.06742634534577,1.45413491791002,1.42598951353889,2.52829406348653,2.10837217149998,2.06271086496374,1.02131881726136,0.540183282093931,1.03486947026204,1.50035924522115,0.354680467284547,0,0.164549020602121,1.2178597964584,2.3467170806371,1.27099242518292,1.32317038832977,1.81374878235628,1.45317984026315,2.47282992205439,0.238744688006273,0.656563598980245,1.1659233465194,0.741701208042039,0.341741761595705,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0.418176592028937,0.218362563746178,0.404593039154462,0.578574190077352,1.04702376793612,0.259229946583586,0,4.50954350947352,2.24274819065968,1.82004339502807,1.94451188344048,1.29159823477731,2.36538575687089,1.5256441023948,3.51551839078665,10.6956531314225,10.3881171955183,6.33666013767304,1.58005560314089,0,0.718976700153791,0.649604114888975,0.358053391334963,0,1.08175904567972,0.886137163047463,0.706765149637033,0.533447646584999,0.907435666231565,0.487289403698762,0.577271049841977,0.350630706544707,2.0405734525369,0,0,0,5.21611903886914,4.129014459926,1.83151624267265,1.2862102744744,0.501572104035363,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0,0,0.399024873401031,0.853668028770671,0,0.419226325255965,0,0.666740183404846,1.03017528619447,0.962757628775446,0.758091635291392,1.01391719956096,0.754505365544305,1.40462261204824,0.768301828858431,0.861532034334199,0.952587382566147,0.695305955669133,1.15745532278223,0.412085900803307,1.03039244094078,0.685738504770831,1.95223386775271,0.476872379894642,0.581385666529314,0.846984423737976,1.01537529470012,0.914639864363863,0.263069711437843,1.22223702461276,0.561142271657738,0.593175090620871,1.47756723563345,0.409231043169689,1.08455788830176,1.54325288784913,0.749431733813838,0.467863216890817,1.50409737833809,2.10417165275728,2.8676884485537,2.55054619182464|short_description=p5@Sulf1}} | ||
|EntrezGene=240725 | |||
|HGNC= | |||
|MCL_coexpression_id=214 | |||
|UniProt=Q8K007 | |||
|association_with_transcript=128bp_to_ENSMUST00000088585,NM_172294,uc007aic.1,uc007aid.1_5end | |||
|description=CAGE_peak_5_at_Sulf1_5end | |||
|id=chr1:12708754..12708834,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.44e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!8.21e-13!23;UBERON:0001009!8.21e-13!23;UBERON:0007100!2.68e-11!18;UBERON:0000948!2.68e-11!18;UBERON:0005498!2.68e-11!18;UBERON:0004140!2.68e-11!18;UBERON:0009881!2.68e-11!18;UBERON:0004141!2.68e-11!18;UBERON:0003084!2.68e-11!18;UBERON:0007005!2.68e-11!18;UBERON:0004139!2.68e-11!18;UBERON:0004291!2.68e-11!18;UBERON:0005156!2.24e-10!26;UBERON:0000990!2.24e-10!26;UBERON:0003133!1.17e-09!24;UBERON:0004872!1.51e-09!33;UBERON:0001048!3.79e-09!147;UBERON:0000464!1.09e-08!57;UBERON:0000991!5.67e-08!18;UBERON:0005564!5.67e-08!18;UBERON:0003103!7.79e-08!43;UBERON:0004176!1.66e-07!17;UBERON:0009196!1.66e-07!17;UBERON:0009117!1.66e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.59e-17,23;UBERON:0001009,4.59e-17,23;UBERON:0007100,5.61e-15,18;UBERON:0000948,5.61e-15,18;UBERON:0005498,5.61e-15,18;UBERON:0004140,5.61e-15,18;UBERON:0009881,5.61e-15,18;UBERON:0004141,5.61e-15,18;UBERON:0003084,5.61e-15,18;UBERON:0007005,5.61e-15,18;UBERON:0004139,5.61e-15,18;UBERON:0004291,5.61e-15,18;UBERON:0004872,3.02e-13,33;UBERON:0005156,3.15e-13,26;UBERON:0000990,3.15e-13,26;UBERON:0003133,3.06e-12,24;UBERON:0000991,6.50e-10,18;UBERON:0005564,6.50e-10,18;UBERON:0004176,2.80e-09,17;UBERON:0009196,2.80e-09,17;UBERON:0009117,2.80e-09,17;UBERON:0002410,2.44e-08,9;UBERON:0003101,4.08e-08,16;UBERON:0000079,4.08e-08,16;UBERON:0003135,7.30e-08,15;UBERON:0003103,8.54e-08,43;UBERON:0001048,9.64e-08,134;UBERON:0000473,1.20e-07,14;UBERON:0000926,1.73e-07,120;UBERON:0004120,1.73e-07,120;UBERON:0006603,1.73e-07,120 | |||
|phase1_expression=1.76163731815273,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.01376931219515,1.46837401729345,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,0.839918529752175,0,0,0,0,42.7050663819672,8.30946975822394,7.21940929188419,0.404632921719196,0,0,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0,0.220868540951614,0,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.142371680799103,0.186399445825301,0,0.377857800533928,6.08715426273523,0.860423876981386,0,0,0,0,0.421333260395256,1.02258193546835,0.519572009205738,1.06001872353102,0.281686839553361,0,0,0,3.68034769719064,4.81383744402687,4.54972000513305,0.22836775943812,4.91981978929626,1.1875371125186,0.346970653532272,0,0.691846491768175,0,1.76383060703557,1.13099932196708,0.247194967734374,6.2177723475562,0,1.29413479957927,0.441683036920787,1.45462575940567,0,0.585561594023094,0.628340120440365,0.510914110417183,0,0,0,0.299581278809645,0,0,0.173824320192276,0,1.0389402227978,0,3.56437773476107,1.11966273549084,1.26361379216837,1.47309299120532,1.82168620147785,0.459804208866946,1.26043490863744,1.65775299619287,1.2246569847239,1.66547836370305,1.03071897015702,3.62184719034622,0,0.189106080167819,0.351902248327898,0,0.278047249225598,0.348252166522167,1.4404749548556,3.58261680273288,0,0,0,2.07125772535502,2.57978665979206,2.34080679899319,2.60419209143731,4.13204886669548,4.01094493507183,4.18561100550734,3.48755421819505,3.85325629811659,5.10135534731789,8.04420573987567,10.133601193232,7.89479932096795,8.78200461164202,6.84452735677896,0.210289948564127,0.102904612379284,0.330418782983798,0.528901133327089,0.639864751605702,1.39342003116263,0.644337306610467,0,0,0.190225626112559,0.949058123089023,0.329397909448022,0,0.994782360205754,1.36474860983384,0,0.216138049874694,0.398282546508734,0,0.571242563048644,0,0.407302655690628,0.193952487167626,0.420814919341911,0.632365371242573,0.885660887877613,0.627994911365499,0.370191491765402,0.296452627087149,0,0.589676985339609,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0.549122826376163,1.43768206527355,0.744281895337007,0,0,0.179397413521912,0,7.20537441649758,0.37898282354097,0.325929952884052,0.848725428875941,0.704070744865506,0.837531287209079,0.952174563544055,0.975668239288994,4.25614889086716,4.20782910332672,3.34855014180723,5.24362607090362,6.90739927463582,5.35201516751593,0,0,0.491764273019036,1.10374698521893,1.12385412991454,0.234423373184406,0,3.02965112645248,8.20321370482267,6.24701990874622,10.7711698866399,4.06246956519338,2.89638276307112,2.54768877709949,8.50102473517278,6.42962887404886,3.16230222357219,0.963963949265421,2.12910127812403,1.6025904330053,6.02681749608232,4.45419332025846,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,2.06742634534577,1.45413491791002,1.42598951353889,2.52829406348653,2.10837217149998,2.06271086496374,1.02131881726136,0.540183282093931,1.03486947026204,1.50035924522115,0.354680467284547,0,0.164549020602121,1.2178597964584,2.3467170806371,1.27099242518292,1.32317038832977,1.81374878235628,1.45317984026315,2.47282992205439,0.238744688006273,0.656563598980245,1.1659233465194,0.741701208042039,0.341741761595705,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0,0.418176592028937,0.218362563746178,0.404593039154462,0.578574190077352,1.04702376793612,0.259229946583586,0,4.50954350947352,2.24274819065968,1.82004339502807,1.94451188344048,1.29159823477731,2.36538575687089,1.5256441023948,3.51551839078665,10.6956531314225,10.3881171955183,6.33666013767304,1.58005560314089,0,0.718976700153791,0.649604114888975,0.358053391334963,0,1.08175904567972,0.886137163047463,0.706765149637033,0.533447646584999,0.907435666231565,0.487289403698762,0.577271049841977,0.350630706544707,2.0405734525369,0,0,0,5.21611903886914,4.129014459926,1.83151624267265,1.2862102744744,0.501572104035363,0,0.460325236507177,0,0.515559547031063,0,0,0,0,0,0,0,0.399024873401031,0.853668028770671,0,0.419226325255965,0,0.666740183404846,1.03017528619447,0.962757628775446,0.758091635291392,1.01391719956096,0.754505365544305,1.40462261204824,0.768301828858431,0.861532034334199,0.952587382566147,0.695305955669133,1.15745532278223,0.412085900803307,1.03039244094078,0.685738504770831,1.95223386775271,0.476872379894642,0.581385666529314,0.846984423737976,1.01537529470012,0.914639864363863,0.263069711437843,1.22223702461276,0.561142271657738,0.593175090620871,1.47756723563345,0.409231043169689,1.08455788830176,1.54325288784913,0.749431733813838,0.467863216890817,1.50409737833809,2.10417165275728,2.8676884485537,2.55054619182464 | |||
|short_description=p5@Sulf1 | |||
}} |
Revision as of 18:39, 13 September 2013
Short description: | p5@Sulf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sulf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:214 |
Association with transcript: | 128bp_to_ENSMUST00000088585, NM_172294, uc007aic.1, uc007aid.1_5end |
EntrezGene: | Sulf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.44e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 4.59e-17 | 23 |
circulatory system | 4.59e-17 | 23 |
primary circulatory organ | 5.61e-15 | 18 |
heart | 5.61e-15 | 18 |
primitive heart tube | 5.61e-15 | 18 |
primary heart field | 5.61e-15 | 18 |
anterior lateral plate mesoderm | 5.61e-15 | 18 |
heart tube | 5.61e-15 | 18 |
heart primordium | 5.61e-15 | 18 |
cardiac mesoderm | 5.61e-15 | 18 |
cardiogenic plate | 5.61e-15 | 18 |
heart rudiment | 5.61e-15 | 18 |
splanchnic layer of lateral plate mesoderm | 3.02e-13 | 33 |
reproductive structure | 3.15e-13 | 26 |
reproductive system | 3.15e-13 | 26 |
reproductive organ | 3.06e-12 | 24 |
gonad | 6.50e-10 | 18 |
gonad primordium | 6.50e-10 | 18 |
external genitalia | 2.80e-09 | 17 |
indifferent external genitalia | 2.80e-09 | 17 |
indifferent gonad | 2.80e-09 | 17 |
autonomic nervous system | 2.44e-08 | 9 |
male organism | 4.08e-08 | 16 |
male reproductive system | 4.08e-08 | 16 |
male reproductive organ | 7.30e-08 | 15 |
compound organ | 8.54e-08 | 43 |
primordium | 9.64e-08 | 134 |
testis | 1.20e-07 | 14 |
mesoderm | 1.73e-07 | 120 |
mesoderm-derived structure | 1.73e-07 | 120 |
presumptive mesoderm | 1.73e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.