FFCP PHASE1:Mm9::chr17:24305712..24305715,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:24305712..24305715,+|id=chr17:24305712..24305715,+|ontology_enrichment_celltype=CL:0000063!9.31e-13!66;CL:0000144!8.07e-11!121;CL:0000012!8.07e-11!121;CL:0000034!2.01e-10!97;CL:0002320!4.09e-10!46;CL:0000134!4.09e-10!46;CL:0000181!1.41e-08!5;CL:0000417!1.41e-08!5;CL:0000668!1.41e-08!5;CL:0000412!1.41e-08!5;CL:0000182!1.41e-08!5;CL:0000988!2.07e-08!32;CL:0002032!2.07e-08!32;CL:0000037!2.07e-08!32;CL:0000566!2.07e-08!32;CL:0000837!2.07e-08!32;CL:0000223!2.18e-08!20;CL:0002371!2.91e-08!118;CL:0000723!3.22e-08!91;CL:0000048!3.22e-08!91;CL:0000219!4.38e-08!54;CL:0000066!7.79e-08!25;CL:0000414!1.22e-07!11;CL:0000049!3.16e-07!19|ontology_enrichment_celltype_v019_2=CL:0000213,7.11e-12,1;CL:0002078,7.11e-12,1;CL:0000115,7.11e-12,1;CL:0002262,7.11e-12,1;CL:1000398,7.11e-12,1;CL:0000355,1.19e-11,9;CL:0000182,1.79e-09,5|ontology_enrichment_disease=DOID:0060100!5.37e-09!3;DOID:4045!5.37e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.18e-33,3;DOID:4045,2.18e-33,3;DOID:0050686,4.12e-17,6|ontology_enrichment_uberon=UBERON:0002384!4.09e-10!46;UBERON:0000490!8.77e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.11e-12,1;UBERON:0001281,7.11e-12,1;UBERON:0000353,7.11e-12,1;UBERON:0003497,7.11e-12,1;UBERON:0003909,7.11e-12,1;UBERON:0003928,7.11e-12,1;UBERON:0003835,7.11e-12,1;UBERON:0003513,7.11e-12,1;UBERON:0001280,7.11e-12,1;UBERON:0004647,7.11e-12,1;UBERON:0002294,7.11e-12,1;UBERON:0001173,7.11e-12,1;UBERON:0004912,7.11e-12,1;UBERON:0005171,7.11e-12,1;UBERON:0001134,1.19e-11,9;UBERON:0002036,1.19e-11,9;UBERON:0002385,1.19e-11,9;UBERON:0000486,1.19e-11,9;UBERON:0007503,1.19e-11,9;UBERON:0001015,1.19e-11,9;UBERON:0002329,1.19e-11,9;UBERON:0003082,1.19e-11,9;UBERON:0003059,1.19e-11,9;UBERON:0007282,1.19e-11,9;UBERON:0004290,1.19e-11,9;UBERON:0009618,1.19e-11,9;UBERON:0000383,1.50e-10,10;UBERON:0007524,1.19e-09,11;UBERON:0003077,1.19e-09,11;UBERON:0007285,1.19e-09,11|phase1_expression=0,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.612508068787107,5.02237956884289,1.5626706890476,2.09409497589519,28.2351114254887,2.73218193983378,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,3.08817488537658,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,0.419854356970974,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:24305712..24305715,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:24305712..24305715,+ | |||
|id=chr17:24305712..24305715,+ | |||
|ontology_enrichment_celltype=CL:0000063!9.31e-13!66;CL:0000144!8.07e-11!121;CL:0000012!8.07e-11!121;CL:0000034!2.01e-10!97;CL:0002320!4.09e-10!46;CL:0000134!4.09e-10!46;CL:0000181!1.41e-08!5;CL:0000417!1.41e-08!5;CL:0000668!1.41e-08!5;CL:0000412!1.41e-08!5;CL:0000182!1.41e-08!5;CL:0000988!2.07e-08!32;CL:0002032!2.07e-08!32;CL:0000037!2.07e-08!32;CL:0000566!2.07e-08!32;CL:0000837!2.07e-08!32;CL:0000223!2.18e-08!20;CL:0002371!2.91e-08!118;CL:0000723!3.22e-08!91;CL:0000048!3.22e-08!91;CL:0000219!4.38e-08!54;CL:0000066!7.79e-08!25;CL:0000414!1.22e-07!11;CL:0000049!3.16e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,7.11e-12,1;CL:0002078,7.11e-12,1;CL:0000115,7.11e-12,1;CL:0002262,7.11e-12,1;CL:1000398,7.11e-12,1;CL:0000355,1.19e-11,9;CL:0000182,1.79e-09,5 | |||
|ontology_enrichment_disease=DOID:0060100!5.37e-09!3;DOID:4045!5.37e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.18e-33,3;DOID:4045,2.18e-33,3;DOID:0050686,4.12e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.09e-10!46;UBERON:0000490!8.77e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,7.11e-12,1;UBERON:0001281,7.11e-12,1;UBERON:0000353,7.11e-12,1;UBERON:0003497,7.11e-12,1;UBERON:0003909,7.11e-12,1;UBERON:0003928,7.11e-12,1;UBERON:0003835,7.11e-12,1;UBERON:0003513,7.11e-12,1;UBERON:0001280,7.11e-12,1;UBERON:0004647,7.11e-12,1;UBERON:0002294,7.11e-12,1;UBERON:0001173,7.11e-12,1;UBERON:0004912,7.11e-12,1;UBERON:0005171,7.11e-12,1;UBERON:0001134,1.19e-11,9;UBERON:0002036,1.19e-11,9;UBERON:0002385,1.19e-11,9;UBERON:0000486,1.19e-11,9;UBERON:0007503,1.19e-11,9;UBERON:0001015,1.19e-11,9;UBERON:0002329,1.19e-11,9;UBERON:0003082,1.19e-11,9;UBERON:0003059,1.19e-11,9;UBERON:0007282,1.19e-11,9;UBERON:0004290,1.19e-11,9;UBERON:0009618,1.19e-11,9;UBERON:0000383,1.50e-10,10;UBERON:0007524,1.19e-09,11;UBERON:0003077,1.19e-09,11;UBERON:0007285,1.19e-09,11 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0.281577444303333,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0,0,0.42438965179803,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,0.612508068787107,5.02237956884289,1.5626706890476,2.09409497589519,28.2351114254887,2.73218193983378,0.971020706062307,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,1.3599426674155,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,3.08817488537658,0.852490498186778,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.849892149969277,0.419854356970974,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:24305712..24305715,+ | |||
}} |
Revision as of 13:41, 13 September 2013
Short description: | p@chr17:24305712..24305715, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:24305712..24305715, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 7.11e-12 | 1 |
meso-epithelial cell | 7.11e-12 | 1 |
endothelial cell | 7.11e-12 | 1 |
endothelial cell of sinusoid | 7.11e-12 | 1 |
endothelial cell of hepatic sinusoid | 7.11e-12 | 1 |
multi-potent skeletal muscle stem cell | 1.19e-11 | 9 |
hepatocyte | 1.79e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
bile duct | 7.11e-12 | 1 |
hepatic sinusoid | 7.11e-12 | 1 |
parenchyma | 7.11e-12 | 1 |
abdomen blood vessel | 7.11e-12 | 1 |
sinusoid | 7.11e-12 | 1 |
digestive system duct | 7.11e-12 | 1 |
abdominal segment blood vessel | 7.11e-12 | 1 |
trunk blood vessel | 7.11e-12 | 1 |
liver parenchyma | 7.11e-12 | 1 |
liver lobule | 7.11e-12 | 1 |
biliary system | 7.11e-12 | 1 |
biliary tree | 7.11e-12 | 1 |
biliary bud | 7.11e-12 | 1 |
hepatic duct | 7.11e-12 | 1 |
skeletal muscle tissue | 1.19e-11 | 9 |
striated muscle tissue | 1.19e-11 | 9 |
muscle tissue | 1.19e-11 | 9 |
multilaminar epithelium | 1.19e-11 | 9 |
epithelial vesicle | 1.19e-11 | 9 |
musculature | 1.19e-11 | 9 |
somite | 1.19e-11 | 9 |
myotome | 1.19e-11 | 9 |
presomitic mesoderm | 1.19e-11 | 9 |
presumptive segmental plate | 1.19e-11 | 9 |
dermomyotome | 1.19e-11 | 9 |
trunk paraxial mesoderm | 1.19e-11 | 9 |
musculature of body | 1.50e-10 | 10 |
dense mesenchyme tissue | 1.19e-09 | 11 |
paraxial mesoderm | 1.19e-09 | 11 |
presumptive paraxial mesoderm | 1.19e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.18e-33 | 3 |
muscle cancer | 2.18e-33 | 3 |
organ system cancer | 4.12e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.