FFCP PHASE1:Mm9::chr2:112079521..112079566,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=99010|HGNC=|MCL_coexpression_id=1|UniProt=Q6NVG1|association_with_transcript=-58bp_to_ENSMUST00000028554_5end|description=CAGE_peak_3_at_Lpcat4_5end|id=chr2:112079521..112079566,+|ontology_enrichment_celltype=CL:0000117!2.50e-08!23;CL:0000337!2.50e-08!23|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-13,23;CL:0000337,2.93e-13,23;CL:0000540,3.11e-08,33;CL:0000047,3.11e-08,33;CL:0000031,3.11e-08,33;CL:0000404,3.11e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.10e-17!52;UBERON:0005068!8.10e-17!52;UBERON:0006241!8.10e-17!52;UBERON:0007135!8.10e-17!52;UBERON:0000033!3.44e-15!63;UBERON:0002020!4.26e-15!34;UBERON:0001017!1.88e-14!73;UBERON:0005743!1.88e-14!73;UBERON:0007811!2.37e-14!86;UBERON:0000955!3.88e-14!50;UBERON:0006238!3.88e-14!50;UBERON:0002346!4.01e-14!71;UBERON:0003075!4.01e-14!71;UBERON:0007284!4.01e-14!71;UBERON:0000073!1.18e-13!75;UBERON:0001016!1.18e-13!75;UBERON:0002616!1.37e-13!49;UBERON:0000153!1.69e-13!94;UBERON:0003056!6.66e-13!49;UBERON:0002791!2.75e-12!29;UBERON:0003528!2.75e-12!29;UBERON:0001893!2.75e-12!29;UBERON:0003080!1.05e-11!40;UBERON:0004121!1.11e-11!102;UBERON:0000924!1.11e-11!102;UBERON:0006601!1.11e-11!102;UBERON:0002780!4.15e-11!39;UBERON:0001890!4.15e-11!39;UBERON:0006240!4.15e-11!39;UBERON:0000956!1.61e-09!21;UBERON:0001869!1.61e-09!21;UBERON:0000203!1.61e-09!21;UBERON:0002619!2.02e-08!17;UBERON:0000064!8.72e-08!99;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.53e-23,34;UBERON:0000073,3.67e-23,54;UBERON:0001049,4.59e-23,52;UBERON:0005068,4.59e-23,52;UBERON:0006241,4.59e-23,52;UBERON:0007135,4.59e-23,52;UBERON:0001017,1.51e-20,73;UBERON:0002346,2.99e-20,64;UBERON:0003075,2.99e-20,64;UBERON:0007284,2.99e-20,64;UBERON:0001016,1.36e-19,75;UBERON:0003528,1.54e-18,29;UBERON:0002791,1.54e-18,29;UBERON:0001893,1.54e-18,29;UBERON:0000955,2.09e-18,47;UBERON:0006238,2.09e-18,47;UBERON:0002616,1.59e-17,46;UBERON:0010371,6.88e-17,73;UBERON:0003080,2.36e-15,40;UBERON:0004121,2.46e-15,95;UBERON:0000924,2.46e-15,95;UBERON:0006601,2.46e-15,95;UBERON:0003056,1.81e-14,49;UBERON:0002780,2.11e-14,39;UBERON:0001890,2.11e-14,39;UBERON:0006240,2.11e-14,39;UBERON:0000956,6.85e-13,21;UBERON:0001869,6.85e-13,21;UBERON:0000203,6.85e-13,21;UBERON:0002021,4.19e-12,10;UBERON:0000411,4.19e-12,10;UBERON:0001950,4.19e-12,10;UBERON:0002619,1.58e-11,17;UBERON:0010314,3.16e-11,92;UBERON:0003076,1.31e-08,12;UBERON:0003057,1.31e-08,12;UBERON:0002240,2.84e-07,6;UBERON:0005174,2.84e-07,6;UBERON:0001137,2.84e-07,6;UBERON:0002420,6.83e-07,8;UBERON:0007245,6.83e-07,8;UBERON:0010009,6.83e-07,8;UBERON:0010011,6.83e-07,8;UBERON:0000454,6.83e-07,8|phase1_expression=1.12104192973356,3.83872948403297,4.09499315450582,0.30246421130683,0.500895729946347,1.84667199103079,1.86890112476421,1.16210991097419,1.68946466582,1.87251621057595,0.34243593645101,1.03703806693937,0.684802919724823,0.786783621770977,0,0,0,0.315462165358238,0,0,2.04103896362567,0.198581902401771,1.30599894569468,2.3998863419011,4.81759490241057,3.44539178469012,0.86152399231815,2.15471232685889,0.380046838912748,0,1.55211357458713,0.635030673459631,1.84519436275371,0,0.577703239502549,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0.683045484958446,0.485510353031154,0,0.405507724878058,0,0.782391344348039,0.218025156380447,0.439372365468944,0.388859798148567,0.419959264876088,0,0.335565212115473,1.45072428402269,1.34437519656986,0.257259436035947,0.573066879877513,1.03134418455488,5.05791152148994,3.1739458756322,3.1691570175309,1.35537812827653,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0.768436610643109,0.518448061542388,1.75507719831198,1.68259969081106,3.42781181284564,4.19650227808066,2.08234358665422,1.91690942036473,0.919218786610021,0,4.21368215681119,5.37622866396852,3.16527090552465,4.66586982372289,0,4.18774498502071,5.6276261003168,4.43114918552749,6.18720029494702,4.6982654663704,5.03278503728312,0.302904773332736,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0.281686839553361,1.28326477414318,0,0,2.59789249213457,1.01343946190039,1.01104889002957,0.11418387971906,0,0.445326417194474,0.520455980298408,0.913396434936424,0.461230994512117,0,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,3.80615036115011,5.02672096352292,0,0.599075622529601,0.599902730993408,0.508280908292259,6.5907881338122,5.94750783664214,7.91622418311046,6.95297280769106,8.43861009190091,5.40248915854856,5.02947915510049,0.611036183101898,0.124406970610093,0.252722758433675,0.631325567659422,1.17108398666433,0.689706313300419,0.720248519221397,0.60281927134286,1.36072998302656,0.512454881139399,1.3118241438362,1.29351685369508,1.5089759505299,0.567318240503458,0.351902248327898,0.657587197282725,0.278047249225598,0.696504333044333,0.205782136407943,0.995171334092466,0.702213187313235,0.51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| ||
|EntrezGene=99010 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q6NVG1 | |||
|association_with_transcript=-58bp_to_ENSMUST00000028554_5end | |||
|description=CAGE_peak_3_at_Lpcat4_5end | |||
|id=chr2:112079521..112079566,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.50e-08!23;CL:0000337!2.50e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-13,23;CL:0000337,2.93e-13,23;CL:0000540,3.11e-08,33;CL:0000047,3.11e-08,33;CL:0000031,3.11e-08,33;CL:0000404,3.11e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.10e-17!52;UBERON:0005068!8.10e-17!52;UBERON:0006241!8.10e-17!52;UBERON:0007135!8.10e-17!52;UBERON:0000033!3.44e-15!63;UBERON:0002020!4.26e-15!34;UBERON:0001017!1.88e-14!73;UBERON:0005743!1.88e-14!73;UBERON:0007811!2.37e-14!86;UBERON:0000955!3.88e-14!50;UBERON:0006238!3.88e-14!50;UBERON:0002346!4.01e-14!71;UBERON:0003075!4.01e-14!71;UBERON:0007284!4.01e-14!71;UBERON:0000073!1.18e-13!75;UBERON:0001016!1.18e-13!75;UBERON:0002616!1.37e-13!49;UBERON:0000153!1.69e-13!94;UBERON:0003056!6.66e-13!49;UBERON:0002791!2.75e-12!29;UBERON:0003528!2.75e-12!29;UBERON:0001893!2.75e-12!29;UBERON:0003080!1.05e-11!40;UBERON:0004121!1.11e-11!102;UBERON:0000924!1.11e-11!102;UBERON:0006601!1.11e-11!102;UBERON:0002780!4.15e-11!39;UBERON:0001890!4.15e-11!39;UBERON:0006240!4.15e-11!39;UBERON:0000956!1.61e-09!21;UBERON:0001869!1.61e-09!21;UBERON:0000203!1.61e-09!21;UBERON:0002619!2.02e-08!17;UBERON:0000064!8.72e-08!99;UBERON:0002021!1.13e-07!10;UBERON:0000411!1.13e-07!10;UBERON:0001950!1.13e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.53e-23,34;UBERON:0000073,3.67e-23,54;UBERON:0001049,4.59e-23,52;UBERON:0005068,4.59e-23,52;UBERON:0006241,4.59e-23,52;UBERON:0007135,4.59e-23,52;UBERON:0001017,1.51e-20,73;UBERON:0002346,2.99e-20,64;UBERON:0003075,2.99e-20,64;UBERON:0007284,2.99e-20,64;UBERON:0001016,1.36e-19,75;UBERON:0003528,1.54e-18,29;UBERON:0002791,1.54e-18,29;UBERON:0001893,1.54e-18,29;UBERON:0000955,2.09e-18,47;UBERON:0006238,2.09e-18,47;UBERON:0002616,1.59e-17,46;UBERON:0010371,6.88e-17,73;UBERON:0003080,2.36e-15,40;UBERON:0004121,2.46e-15,95;UBERON:0000924,2.46e-15,95;UBERON:0006601,2.46e-15,95;UBERON:0003056,1.81e-14,49;UBERON:0002780,2.11e-14,39;UBERON:0001890,2.11e-14,39;UBERON:0006240,2.11e-14,39;UBERON:0000956,6.85e-13,21;UBERON:0001869,6.85e-13,21;UBERON:0000203,6.85e-13,21;UBERON:0002021,4.19e-12,10;UBERON:0000411,4.19e-12,10;UBERON:0001950,4.19e-12,10;UBERON:0002619,1.58e-11,17;UBERON:0010314,3.16e-11,92;UBERON:0003076,1.31e-08,12;UBERON:0003057,1.31e-08,12;UBERON:0002240,2.84e-07,6;UBERON:0005174,2.84e-07,6;UBERON:0001137,2.84e-07,6;UBERON:0002420,6.83e-07,8;UBERON:0007245,6.83e-07,8;UBERON:0010009,6.83e-07,8;UBERON:0010011,6.83e-07,8;UBERON:0000454,6.83e-07,8 | |||
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| |||
|short_description=p3@Lpcat4 | |||
}} |
Revision as of 21:36, 13 September 2013
Short description: | p3@Lpcat4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lpcat4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -58bp_to_ENSMUST00000028554_5end |
EntrezGene: | Lpcat4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.93e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.93e-13 | 23 |
neuron | 3.11e-08 | 33 |
neuronal stem cell | 3.11e-08 | 33 |
neuroblast | 3.11e-08 | 33 |
electrically signaling cell | 3.11e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.