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Coexpression cluster:C35: Difference between revisions

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|tf_chipseq_enrich=SUZ12#23512;38:3.57969863650449:2.74779101846186e-11:3.21722585400379e-09
|tf_chipseq_enrich=SUZ12#23512;38:3.57969863650449:2.74779101846186e-11:3.21722585400379e-09
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|tfbs_overrepresentation_for_novel_motifs=0.675831,2.19004,0.0846565,0.459423,0.338578,0.101882,0.570228,0.0416599,0.330108,6.3006,0.589335,0.185129,3.54511,0.319566,0.515883,0.239387,0.109089,1.21423,2.30693e-05,7.37962,0.594335,0.00069262,0.0174077,0.0142706,0.0788893,1.48778,3.09239,0.25004,1.7874,1.39887,0.42112,0.356299,2.33603,0.186909,0.371588,8.22085,1.88589,0.0750831,0.983336,3.16349,0.358736,0.257518,0.240883,1.93558,0.274387,0.238,1.28478,0.419368,0.270835,0.177536,0.0783458,0.0192339,0.213725,0.657455,0.118538,0.333283,0.199456,0.150339,0.352978,0.052408,0.368997,0.0938406,0.110031,0.25934,0.0907919,0.0433942,0.232281,0.196627,1.1282,0.0841959,0.803004,0.543328,1.96211,0.942871,2.70494,0.727168,0.0525732,0.818482,0.0262586,0.189007,1.74377,0.926352,1.16863,0.767978,0.136986,0.496844,7.20033,4.01171,0.00130857,1.51561,2.00304,0.292782,0.0773568,1.50464,0.244197,2.15537,0.743073,0.956712,0.439812,2.92107,3.05725,0.191185,0.727859,0.357959,0.954093,0.0625786,0.0547739,1.26464,0.725383,0.915287,1.15857,0.401729,1.65972,0.903546,0.0757716,0.00517957,4.74108,0.582129,0.111995,0.280246,2.1339,0.232383,0.282965,1.1193,0.161402,1.00028,0.76002,0.0824029,0.154825,0.118531,0.602706,0.720132,1.50648,0.0163446,0.430063,4.14042,0.158346,0.779261,0.54606,0.347435,0.348883,0.0205917,0.352284,0.197343,1.57321,2.4993,0.176035,0.669931,2.32876,0.670981,0.105219,1.16796,0.804315,1.23978,0.709219,0.756661,0.689903,0.0040366,0.0130155,0.214276,0.4463,0.0887279,1.81824,0.281295,0.0482466,0.0380421,0.554489,0.290199,1.1207e-10
}}
}}

Revision as of 13:10, 26 November 2012


Full id: C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula



Phase1 CAGE Peaks

Hg19::chr10:25463951..25463976,+p4@GPR158
Hg19::chr10:26097547..26097552,+p@chr10:26097547..26097552
+
Hg19::chr10:26097558..26097569,+p@chr10:26097558..26097569
+
Hg19::chr10:26505642..26505653,+p5@GAD2
Hg19::chr10:26505670..26505692,+p3@GAD2
Hg19::chr10:26505695..26505714,+p1@GAD2
Hg19::chr10:26592437..26592441,+p@chr10:26592437..26592441
+
Hg19::chr10:30347761..30347786,+p@chr10:30347761..30347786
+
Hg19::chr10:560764..560769,-p@chr10:560764..560769
-
Hg19::chr10:560806..560813,-p@chr10:560806..560813
-
Hg19::chr10:73313437..73313451,-p@chr10:73313437..73313451
-
Hg19::chr10:74928065..74928085,-p4@ECD
Hg19::chr10:88414338..88414356,+p2@OPN4
Hg19::chr10:97261796..97261806,-p@chr10:97261796..97261806
-
Hg19::chr10:97261825..97261855,-p@chr10:97261825..97261855
-
Hg19::chr10:97261874..97261887,-p@chr10:97261874..97261887
-
Hg19::chr10:97261901..97261919,-p@chr10:97261901..97261919
-
Hg19::chr11:107461901..107461910,+p7@ELMOD1
Hg19::chr11:113346113..113346125,-p1@DRD2
Hg19::chr11:113346130..113346143,-p2@DRD2
Hg19::chr11:118023490..118023555,-p1@SCN4B
Hg19::chr11:118023689..118023705,-p4@SCN4B
Hg19::chr11:120690389..120690422,+p@chr11:120690389..120690422
+
Hg19::chr11:13461601..13461620,-p5@BTBD10
Hg19::chr11:13461676..13461696,-p3@BTBD10
Hg19::chr11:18754900..18754906,-p13@PTPN5
Hg19::chr11:18765490..18765499,-p16@PTPN5
Hg19::chr11:18765553..18765567,-p7@PTPN5
Hg19::chr11:18765589..18765610,-p6@PTPN5
Hg19::chr11:18765839..18765846,-p10@PTPN5
Hg19::chr11:18765881..18765897,-p3@PTPN5
Hg19::chr11:26495447..26495461,+p5@ANO3
Hg19::chr11:26495467..26495474,+p8@ANO3
Hg19::chr11:26495493..26495544,+p2@ANO3
Hg19::chr11:26495561..26495588,+p4@ANO3
Hg19::chr11:26495590..26495631,+p3@ANO3
Hg19::chr11:26497871..26497889,+p@chr11:26497871..26497889
+
Hg19::chr11:30037513..30037524,-p@chr11:30037513..30037524
-
Hg19::chr11:30038451..30038462,-p3@KCNA4
Hg19::chr11:30038490..30038590,-p1@KCNA4
Hg19::chr11:41481753..41481767,-p4@LRRC4C
Hg19::chr11:46413318..46413337,-p@chr11:46413318..46413337
-
Hg19::chr11:47616800..47616812,-p@chr11:47616800..47616812
-
Hg19::chr11:47616815..47616868,-p@chr11:47616815..47616868
-
Hg19::chr11:47616996..47617008,-p@chr11:47616996..47617008
-
Hg19::chr11:47617035..47617045,-p@chr11:47617035..47617045
-
Hg19::chr11:62475005..62475041,-p6@BSCL2
Hg19::chr11:63213436..63213461,-p@chr11:63213436..63213461
-
Hg19::chr11:67174819..67174825,-p14@PPP1CA
Hg19::chr11:73053721..73053736,+p19@ARHGEF17
Hg19::chr11:80886203..80886231,+p@chr11:80886203..80886231
+
Hg19::chr11:83393457..83393474,-p23@DLG2
Hg19::chr12:107168436..107168475,+p1@RIC8B
Hg19::chr12:107168486..107168499,+p5@RIC8B
Hg19::chr12:107974917..107974948,+p2@BTBD11
Hg19::chr12:113599241..113599257,-p2@DDX54
Hg19::chr12:113599258..113599282,-p5@DDX54
Hg19::chr12:113599286..113599309,-p4@DDX54
Hg19::chr12:11652913..11652927,+p@chr12:11652913..11652927
+
Hg19::chr12:117513131..117513155,-p@chr12:117513131..117513155
-
Hg19::chr12:1192272..1192282,+p23@ERC1
Hg19::chr12:1192302..1192347,+p6@ERC1
Hg19::chr12:122181551..122181562,+p@chr12:122181551..122181562
+
Hg19::chr12:49375285..49375341,-p@chr12:49375285..49375341
-
Hg19::chr12:49375345..49375356,-p@chr12:49375345..49375356
-
Hg19::chr12:49392013..49392033,+p2@ENST00000552933
p2@uc001rsw.2
Hg19::chr12:51984146..51984157,+p11@SCN8A
Hg19::chr12:54943277..54943291,+p7@PDE1B
Hg19::chr12:54943367..54943368,+p9@PDE1B
Hg19::chr12:54943370..54943457,+p1@PDE1B
Hg19::chr12:6031299..6031315,-p@chr12:6031299..6031315
-
Hg19::chr12:6809498..6809509,-p16@C12orf53
Hg19::chr12:8821192..8821221,+p@chr12:8821192..8821221
+
Hg19::chr12:99548573..99548580,-p22@ANKS1B
Hg19::chr13:112711105..112711165,+p1@AK091058
p1@AX746756
Hg19::chr13:112726433..112726446,+p@chr13:112726433..112726446
+
Hg19::chr13:27334879..27334930,-p1@GPR12
Hg19::chr13:33780283..33780296,-p11@STARD13
Hg19::chr13:33780307..33780326,-p10@STARD13
Hg19::chr13:42621762..42621776,+p@chr13:42621762..42621776
+
Hg19::chr13:52419272..52419302,-p1@LINC00282
Hg19::chr13:52419305..52419318,-p2@LINC00282
Hg19::chr13:98995904..98995913,+p@chr13:98995904..98995913
+
Hg19::chr13:98995923..98995941,+p@chr13:98995923..98995941
+
Hg19::chr14:100150588..100150598,+p4@CYP46A1
Hg19::chr14:101123580..101123593,+p1@LINC00523
Hg19::chr14:31343963..31343974,+p4@COCH
Hg19::chr14:64884595..64884607,+p@chr14:64884595..64884607
+
Hg19::chr14:71905629..71905640,+p@chr14:71905629..71905640
+
Hg19::chr14:71905646..71905668,+p@chr14:71905646..71905668
+
Hg19::chr14:74892878..74892940,-p1@SYNDIG1L
Hg19::chr14:74892961..74892962,-p9@SYNDIG1L
Hg19::chr14:74892966..74892975,-p5@SYNDIG1L
Hg19::chr14:74892985..74893018,-p2@SYNDIG1L
Hg19::chr14:74893023..74893028,-p6@SYNDIG1L
Hg19::chr14:78638568..78638583,+p@chr14:78638568..78638583
+
Hg19::chr14:78638610..78638621,+p@chr14:78638610..78638621
+
Hg19::chr14:78638636..78638661,+p@chr14:78638636..78638661
+
Hg19::chr14:78638668..78638680,+p@chr14:78638668..78638680
+
Hg19::chr14:97059093..97059110,+p1@ENST00000555496
Hg19::chr15:26273479..26273488,+p@chr15:26273479..26273488
+
Hg19::chr15:27112251..27112268,+p7@GABRA5
Hg19::chr15:27112311..27112352,+p2@GABRA5
Hg19::chr15:27112357..27112376,+p6@GABRA5
Hg19::chr15:27112380..27112407,+p4@GABRA5
Hg19::chr15:28197051..28197058,-p@chr15:28197051..28197058
-
Hg19::chr15:35546024..35546035,-p@chr15:35546024..35546035
-
Hg19::chr15:35546050..35546062,-p@chr15:35546050..35546062
-
Hg19::chr15:35546154..35546174,-p@chr15:35546154..35546174
-
Hg19::chr15:37391241..37391291,+p3@ENST00000559509
Hg19::chr15:37777334..37777345,-p@chr15:37777334..37777345
-
Hg19::chr15:40582949..40582989,+p@chr15:40582949..40582989
+
Hg19::chr15:52216569..52216591,+p12@TMOD3
Hg19::chr15:52849527..52849546,-p@chr15:52849527..52849546
-
Hg19::chr15:52849582..52849587,-p@chr15:52849582..52849587
-
Hg19::chr15:87121973..87122016,+p@chr15:87121973..87122016
+
Hg19::chr15:92236013..92236021,+p@chr15:92236013..92236021
+
Hg19::chr16:10037039..10037076,-p@chr16:10037039..10037076
-
Hg19::chr16:21289585..21289596,-p4@CRYM
Hg19::chr16:21289603..21289621,-p1@CRYM
Hg19::chr16:30418387..30418422,+p4@ZNF771
Hg19::chr16:6069586..6069602,+p12@RBFOX1
Hg19::chr16:6069618..6069632,+p21@RBFOX1
Hg19::chr16:645297..645302,+p@chr16:645297..645302
+
Hg19::chr16:69752391..69752446,-p2@NQO1
Hg19::chr16:7353246..7353257,+p@chr16:7353246..7353257
+
Hg19::chr16:7472741..7472793,+p@chr16:7472741..7472793
+
Hg19::chr16:7560019..7560030,+p@chr16:7560019..7560030
+
Hg19::chr16:7560114..7560129,+p@chr16:7560114..7560129
+
Hg19::chr16:7560163..7560195,+p@chr16:7560163..7560195
+
Hg19::chr16:756432..756446,-p@chr16:756432..756446
-
Hg19::chr16:84002234..84002321,+p1@NECAB2
Hg19::chr17:17642453..17642464,+p@chr17:17642453..17642464
+
Hg19::chr17:17642473..17642491,+p@chr17:17642473..17642491
+
Hg19::chr17:17642493..17642503,+p@chr17:17642493..17642503
+
Hg19::chr17:17642516..17642523,+p@chr17:17642516..17642523
+
Hg19::chr17:19314432..19314443,+p7@RNF112
Hg19::chr17:19390211..19390223,+p@chr17:19390211..19390223
+
Hg19::chr17:19390234..19390251,+p@chr17:19390234..19390251
+
Hg19::chr17:37783197..37783216,+p1@PPP1R1B
Hg19::chr17:65489258..65489261,-p@chr17:65489258..65489261
-
Hg19::chr17:7271778..7271784,+p@chr17:7271778..7271784
+
Hg19::chr17:77179487..77179515,-p@chr17:77179487..77179515
-
Hg19::chr17:77179759..77179795,-p@chr17:77179759..77179795
-
Hg19::chr17:77721568..77721571,+p@chr17:77721568..77721571
+
Hg19::chr17:79001706..79001731,-p@chr17:79001706..79001731
-
Hg19::chr17:9963091..9963137,-p@chr17:9963091..9963137
-
Hg19::chr18:11751466..11751475,+p22@GNAL
Hg19::chr18:11751493..11751507,+p12@GNAL
Hg19::chr18:11751516..11751523,+p17@GNAL
Hg19::chr18:11751532..11751546,+p13@GNAL
Hg19::chr18:11751553..11751597,+p4@GNAL
Hg19::chr18:11751608..11751632,+p8@GNAL
Hg19::chr18:11752040..11752117,+p3@GNAL
Hg19::chr18:11752139..11752148,+p27@GNAL
Hg19::chr18:11752301..11752337,+p7@GNAL
Hg19::chr18:37421624..37421678,+p@chr18:37421624..37421678
+
Hg19::chr18:47967428..47967437,-p@chr18:47967428..47967437
-
Hg19::chr18:47967443..47967452,-p@chr18:47967443..47967452
-
Hg19::chr18:54898506..54898515,+p@chr18:54898506..54898515
+
Hg19::chr18:55019352..55019368,+p6@ST8SIA3
Hg19::chr19:1236637..1236645,-p@chr19:1236637..1236645
-
Hg19::chr19:18228778..18228874,+p@chr19:18228778..18228874
+
Hg19::chr19:18228885..18228898,+p@chr19:18228885..18228898
+
Hg19::chr19:1863858..1863871,-p7@KLF16
Hg19::chr19:19640188..19640201,+p@chr19:19640188..19640201
+
Hg19::chr19:2308127..2308159,-p1@LINGO3
Hg19::chr19:2308162..2308176,-p3@LINGO3
Hg19::chr19:2512346..2512351,-p@chr19:2512346..2512351
-
Hg19::chr19:2702681..2702699,-p1@GNG7
Hg19::chr19:2702719..2702730,-p2@GNG7
Hg19::chr19:30018293..30018311,-p@chr19:30018293..30018311
-
Hg19::chr19:46999021..46999026,-p3@PNMAL2
Hg19::chr19:49016307..49016316,-p@chr19:49016307..49016316
-
Hg19::chr19:55963280..55963302,-p@chr19:55963280..55963302
-
Hg19::chr19:57269846..57269858,-p@chr19:57269846..57269858
-
Hg19::chr19:719482..719505,+p@chr19:719482..719505
+
Hg19::chr19:719510..719520,+p@chr19:719510..719520
+
Hg19::chr19:7989666..7989677,-p@chr19:7989666..7989677
-
Hg19::chr19:7990321..7990332,-p13@CTXN1
Hg19::chr1:101003660..101003671,+p7@GPR88
Hg19::chr1:101003675..101003682,+p5@GPR88
Hg19::chr1:101003687..101003720,+p1@GPR88
Hg19::chr1:101003723..101003731,+p10@GPR88
Hg19::chr1:101003738..101003747,+p9@GPR88
Hg19::chr1:101003751..101003765,+p6@GPR88
Hg19::chr1:101003767..101003782,+p2@GPR88
Hg19::chr1:101003820..101003834,+p4@GPR88
Hg19::chr1:101004379..101004436,+p3@GPR88
Hg19::chr1:10510155..10510176,+p3@CORT
Hg19::chr1:10510186..10510203,+p2@CORT
Hg19::chr1:10510237..10510249,+p6@CORT
Hg19::chr1:110163540..110163564,+p8@AMPD2
Hg19::chr1:145076195..145076204,-p43@PDE4DIP
Hg19::chr1:154150651..154150691,-p4@TPM3
Hg19::chr1:161228524..161228542,+p1@PCP4L1
Hg19::chr1:174415225..174415243,+p@chr1:174415225..174415243
+
Hg19::chr1:174415258..174415294,+p@chr1:174415258..174415294
+
Hg19::chr1:174417095..174417131,+p1@GPR52
Hg19::chr1:177134234..177134239,-p14@ASTN1
Hg19::chr1:181451505..181451517,+p@chr1:181451505..181451517
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Hg19::chr1:181452288..181452295,+p4@CACNA1E
Hg19::chr1:181452441..181452452,+p7@CACNA1E
Hg19::chr1:181452460..181452471,+p8@CACNA1E
Hg19::chr1:181452478..181452502,+p3@CACNA1E
Hg19::chr1:182641367..182641378,-p7@RGS8
Hg19::chr1:182653685..182653730,-p1@RGS8
Hg19::chr1:204306804..204306822,-p@chr1:204306804..204306822
-
Hg19::chr1:204306825..204306833,-p@chr1:204306825..204306833
-
Hg19::chr1:204336774..204336807,-p@chr1:204336774..204336807
-
Hg19::chr1:21952870..21952889,-p7@RAP1GAP
Hg19::chr1:21991786..21991810,-p@chr1:21991786..21991810
-
Hg19::chr1:21995805..21995867,-p1@RAP1GAP
Hg19::chr1:21995905..21995916,-p4@RAP1GAP
Hg19::chr1:228399053..228399061,-p@chr1:228399053..228399061
-
Hg19::chr1:228603694..228603706,-p7@TRIM17
Hg19::chr1:229543087..229543096,+p@chr1:229543087..229543096
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Hg19::chr1:234040273..234040278,+p14@SLC35F3
Hg19::chr1:234326794..234326838,+p@chr1:234326794..234326838
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Hg19::chr1:236849565..236849623,+p3@ACTN2
Hg19::chr1:242372439..242372456,+p1@ENST00000421878
Hg19::chr1:244945778..244945781,-p@chr1:244945778..244945781
-
Hg19::chr1:31352916..31352926,-p@chr1:31352916..31352926
-
Hg19::chr1:31352969..31352970,-p@chr1:31352969..31352970
-
Hg19::chr1:33351632..33351643,+p7@HPCA
Hg19::chr1:33352024..33352035,+p3@HPCA
Hg19::chr1:33352036..33352054,+p2@HPCA
Hg19::chr1:33352057..33352103,+p1@HPCA
Hg19::chr1:33353086..33353125,+p@chr1:33353086..33353125
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Hg19::chr1:33354828..33354837,+p8@HPCA
Hg19::chr1:33359635..33359658,+p@chr1:33359635..33359658
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Hg19::chr1:35198521..35198523,-p@chr1:35198521..35198523
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Hg19::chr1:35391126..35391133,-p8@DLGAP3
Hg19::chr1:36024172..36024187,+p8@NCDN
Hg19::chr1:36031558..36031568,+p@chr1:36031558..36031568
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Hg19::chr1:36031750..36031803,+p@chr1:36031750..36031803
+
Hg19::chr1:44024652..44024661,+p@chr1:44024652..44024661
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Hg19::chr1:61088194..61088209,-p@chr1:61088194..61088209
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Hg19::chr1:70035053..70035078,+p@chr1:70035053..70035078
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Hg19::chr1:84945373..84945384,+p@chr1:84945373..84945384
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Hg19::chr1:99729999..99730002,+p6@LPPR4
Hg19::chr20:13976127..13976171,+p1@MACROD2
Hg19::chr20:1974692..1974712,-p1@PDYN
Hg19::chr20:36041278..36041312,-p@chr20:36041278..36041312
-
Hg19::chr20:37352783..37352872,+p2@SLC32A1
Hg19::chr20:37353036..37353054,+p4@SLC32A1
Hg19::chr20:37353084..37353109,+p3@SLC32A1
Hg19::chr20:37353121..37353137,+p1@SLC32A1
Hg19::chr20:52130775..52130802,-p@chr20:52130775..52130802
-
Hg19::chr20:60794222..60794232,-p@chr20:60794222..60794232
-
Hg19::chr20:61806320..61806344,+p@chr20:61806320..61806344
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Hg19::chr20:9494913..9494925,+p10@LAMP5
Hg19::chr20:9494928..9494945,+p6@LAMP5
Hg19::chr20:9494967..9494972,+p16@LAMP5
Hg19::chr20:9494977..9494982,+p15@LAMP5
Hg19::chr20:9494987..9495027,+p4@LAMP5
Hg19::chr20:9495106..9495117,+p12@LAMP5
Hg19::chr20:9495125..9495132,+p17@LAMP5
Hg19::chr20:9496091..9496106,+p@chr20:9496091..9496106
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Hg19::chr21:27136601..27136613,+p@chr21:27136601..27136613
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Hg19::chr21:27650939..27650945,-p@chr21:27650939..27650945
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Hg19::chr21:27650975..27651019,-p@chr21:27650975..27651019
-
Hg19::chr21:27651095..27651104,+p@chr21:27651095..27651104
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Hg19::chr21:41239344..41239371,+p1@PCP4
Hg19::chr21:41239376..41239379,+p2@PCP4
Hg19::chr21:41270394..41270426,+p3@PCP4
Hg19::chr21:41300975..41300984,+p@chr21:41300975..41300984
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Hg19::chr21:41301023..41301064,+p@chr21:41301023..41301064
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Hg19::chr21:41301103..41301113,+p@chr21:41301103..41301113
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Hg19::chr21:42794679..42794684,+p@chr21:42794679..42794684
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Hg19::chr21:43917145..43917190,-p@chr21:43917145..43917190
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Hg19::chr21:43917191..43917207,-p@chr21:43917191..43917207
-
Hg19::chr21:45788960..45788972,+p12@TRPM2
Hg19::chr22:21133701..21133717,+p4@SERPIND1
Hg19::chr22:24828131..24828144,+p12@ADORA2A
Hg19::chr22:24828159..24828174,+p9@ADORA2A
Hg19::chr22:24828207..24828223,+p6@ADORA2A
Hg19::chr22:24828237..24828249,+p11@ADORA2A
Hg19::chr22:24828830..24828842,+p14@ADORA2A
Hg19::chr22:27727719..27727726,+p2@ENST00000413244
Hg19::chr22:27727733..27727758,+p1@ENST00000413244
Hg19::chr22:27727810..27727817,+p3@ENST00000413244
Hg19::chr22:28195426..28195433,-p@chr22:28195426..28195433
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Hg19::chr22:35936837..35936851,+p5@RASD2
Hg19::chr22:35936857..35936910,+p1@RASD2
Hg19::chr22:35936916..35936939,+p4@RASD2
Hg19::chr22:35936942..35936961,+p3@RASD2
Hg19::chr22:40381898..40381913,+p@chr22:40381898..40381913
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Hg19::chr22:41763274..41763318,+p3@TEF
Hg19::chr22:45608501..45608517,-p9@KIAA0930
Hg19::chr2:100938891..100938902,-p1@LONRF2
Hg19::chr2:100938922..100938932,-p3@LONRF2
Hg19::chr2:10977804..10977815,-p9@PDIA6
Hg19::chr2:10977826..10977843,-p7@PDIA6
Hg19::chr2:10977855..10977873,-p10@PDIA6
Hg19::chr2:10978182..10978189,-p17@PDIA6
Hg19::chr2:11052234..11052256,+p6@KCNF1
Hg19::chr2:112655590..112655599,+p3@MERTK
Hg19::chr2:11810127..11810141,-p5@NTSR2
Hg19::chr2:127783377..127783391,+p2@BC051739
Hg19::chr2:132589601..132589606,-p2@ENST00000437330
Hg19::chr2:132589610..132589633,-p1@ENST00000437330
Hg19::chr2:132795585..132795615,-p1@ENST00000450396
Hg19::chr2:152828264..152828299,-p@chr2:152828264..152828299
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Hg19::chr2:152955669..152955696,-p6@CACNB4
Hg19::chr2:152955804..152955817,-p8@CACNB4
Hg19::chr2:152955822..152955836,-p11@CACNB4
Hg19::chr2:177330664..177330679,+p@chr2:177330664..177330679
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Hg19::chr2:212989602..212989612,-p@chr2:212989602..212989612
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Hg19::chr2:212989626..212989648,-p@chr2:212989626..212989648
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Hg19::chr2:217559160..217559206,+p1@ENST00000447289
Hg19::chr2:219724385..219724430,+p3@WNT6
Hg19::chr2:231751207..231751225,+p1@ENST00000447074
p1@ENST00000455128
Hg19::chr2:2330295..2330320,-p18@MYT1L
Hg19::chr2:234227370..234227385,+p@chr2:234227370..234227385
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Hg19::chr2:242089677..242089695,-p10@PASK
Hg19::chr2:242171468..242171498,-p@chr2:242171468..242171498
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Hg19::chr2:26781521..26781537,-p2@OTOF
Hg19::chr2:26781616..26781641,-p1@OTOF
Hg19::chr2:3129213..3129231,-p@chr2:3129213..3129231
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Hg19::chr2:3134334..3134349,-p@chr2:3134334..3134349
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Hg19::chr2:3134361..3134374,-p@chr2:3134361..3134374
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Hg19::chr2:3853961..3853984,+p@chr2:3853961..3853984
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Hg19::chr2:42721689..42721723,+p6@MTA3
Hg19::chr2:45169832..45169844,+p@chr2:45169832..45169844
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Hg19::chr2:7112752..7112770,+p@chr2:7112752..7112770
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Hg19::chr2:86769939..86769942,-p17@RNF103-CHMP3
p19@CHMP3
Hg19::chr3:107113547..107113596,+p@chr3:107113547..107113596
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Hg19::chr3:11019677..11019690,-p@chr3:11019677..11019690
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Hg19::chr3:116991825..116991848,-p@chr3:116991825..116991848
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Hg19::chr3:123304017..123304040,-p6@PTPLB
Hg19::chr3:154069099..154069102,-p@chr3:154069099..154069102
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Hg19::chr3:154147870..154147881,-p2@GPR149
Hg19::chr3:154147920..154147931,-p3@GPR149
Hg19::chr3:154147973..154148010,-p1@GPR149
Hg19::chr3:154148047..154148051,-p@chr3:154148047..154148051
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Hg19::chr3:154796862..154796880,+p@chr3:154796862..154796880
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Hg19::chr3:156008809..156008839,+p1@KCNAB1
Hg19::chr3:156008842..156008850,+p17@KCNAB1
Hg19::chr3:156008856..156008863,+p23@KCNAB1
Hg19::chr3:156008882..156008889,+p21@KCNAB1
Hg19::chr3:156008904..156008912,+p18@KCNAB1
Hg19::chr3:156008932..156008939,+p19@KCNAB1
Hg19::chr3:156008942..156008957,+p5@KCNAB1
Hg19::chr3:156008965..156008976,+p9@KCNAB1
Hg19::chr3:156008987..156009006,+p4@KCNAB1
Hg19::chr3:16851273..16851310,+p@chr3:16851273..16851310
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Hg19::chr3:172166557..172166598,+p@chr3:172166557..172166598
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Hg19::chr3:181160240..181160289,-p1@ENST00000460993
Hg19::chr3:196987309..196987350,-p12@DLG1
Hg19::chr3:196987505..196987510,-p44@DLG1
Hg19::chr3:197185270..197185281,+p1@ENST00000420213
Hg19::chr3:35721106..35721127,+p1@ARPP21
Hg19::chr3:35721130..35721147,+p3@ARPP21
Hg19::chr3:35721182..35721195,+p15@ARPP21
Hg19::chr3:35722424..35722438,+p17@ARPP21
Hg19::chr3:35722453..35722472,+p21@ARPP21
Hg19::chr3:35722487..35722507,+p19@ARPP21
Hg19::chr3:35722978..35722999,+p28@ARPP21
Hg19::chr3:35723328..35723338,+p43@ARPP21
Hg19::chr3:35726298..35726309,+p@chr3:35726298..35726309
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Hg19::chr3:35730760..35730766,+p78@ARPP21
Hg19::chr3:36916021..36916039,-p10@TRANK1
Hg19::chr3:39543931..39543972,+p@chr3:39543931..39543972
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Hg19::chr3:41236325..41236347,+p46@CTNNB1
Hg19::chr3:42695613..42695636,+p@chr3:42695613..42695636
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Hg19::chr3:54157466..54157475,-p@chr3:54157466..54157475
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Hg19::chr3:57807798..57807809,+p@chr3:57807798..57807809
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Hg19::chr3:63428869..63428894,+p5@SYNPR
Hg19::chr3:63428918..63428932,+p4@SYNPR
Hg19::chr3:63428943..63428958,+p7@SYNPR
Hg19::chr3:63428975..63428978,+p10@SYNPR
Hg19::chr3:63428982..63429027,+p2@SYNPR
Hg19::chr3:63429030..63429045,+p3@SYNPR
Hg19::chr3:63542271..63542311,+p@chr3:63542271..63542311
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Hg19::chr3:63542313..63542321,+p@chr3:63542313..63542321
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Hg19::chr3:63542325..63542333,+p@chr3:63542325..63542333
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Hg19::chr3:63601373..63601385,+p@chr3:63601373..63601385
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Hg19::chr3:71631879..71631890,-p@chr3:71631879..71631890
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Hg19::chr3:85007662..85007678,+p8@CADM2
Hg19::chr4:102268073..102268104,-p2@PPP3CA
Hg19::chr4:102268331..102268342,-p4@PPP3CA
Hg19::chr4:113970595..113970604,+p19@ANK2
Hg19::chr4:118955591..118955612,+p5@NDST3
Hg19::chr4:135557487..135557500,-p@chr4:135557487..135557500
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Hg19::chr4:156129588..156129599,-p1@ENST00000511017
Hg19::chr4:156417021..156417050,+p@chr4:156417021..156417050
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Hg19::chr4:156417309..156417316,+p@chr4:156417309..156417316
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Hg19::chr4:156417330..156417349,+p@chr4:156417330..156417349
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Hg19::chr4:156417352..156417363,+p@chr4:156417352..156417363
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Hg19::chr4:165305289..165305300,-p19@MARCH1
Hg19::chr4:166128610..166128628,+p4@KLHL2
Hg19::chr4:185115354..185115359,-p@chr4:185115354..185115359
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Hg19::chr4:185115370..185115380,-p@chr4:185115370..185115380
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Hg19::chr4:571010..571021,+p2@ENST00000542026
Hg19::chr4:58067263..58067273,+p@chr4:58067263..58067273
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Hg19::chr4:6565315..6565327,-p16@PPP2R2C
Hg19::chr4:71945904..71945922,+p@chr4:71945904..71945922
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Hg19::chr4:72101895..72101903,+p14@SLC4A4
Hg19::chr4:72101966..72101969,+p21@SLC4A4
Hg19::chr4:72102117..72102131,+p15@SLC4A4
Hg19::chr4:7663026..7663047,+p@chr4:7663026..7663047
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Hg19::chr4:8073705..8073720,-p2@ABLIM2
Hg19::chr4:8073763..8073768,-p11@ABLIM2
Hg19::chr4:88192251..88192260,+p@chr4:88192251..88192260
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Hg19::chr4:96470557..96470642,-p4@UNC5C
Hg19::chr5:110559312..110559356,+p7@CAMK4
Hg19::chr5:119669127..119669137,-p4@ENST00000514240
Hg19::chr5:119669146..119669157,-p2@ENST00000514240
Hg19::chr5:119669160..119669188,-p1@ENST00000514240
Hg19::chr5:119669209..119669216,-p5@ENST00000514240
Hg19::chr5:121648127..121648167,-p@chr5:121648127..121648167
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Hg19::chr5:132149017..132149073,+p1@SOWAHA
Hg19::chr5:132149081..132149086,+p8@SOWAHA
Hg19::chr5:132149121..132149131,+p4@SOWAHA
Hg19::chr5:132151694..132151707,+p@chr5:132151694..132151707
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Hg19::chr5:132607538..132607543,+p@chr5:132607538..132607543
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Hg19::chr5:148033693..148033713,-p1@HTR4
Hg19::chr5:148033726..148033737,-p3@HTR4
Hg19::chr5:158500772..158500802,-p27@EBF1
Hg19::chr5:174871136..174871190,-p1@DRD1
Hg19::chr5:176784817..176784833,+p7@RGS14
Hg19::chr5:176896174..176896191,-p21@DBN1
Hg19::chr5:31639024..31639047,+p8@PDZD2
Hg19::chr5:31639071..31639086,+p7@PDZD2
Hg19::chr5:35195732..35195740,-p22@PRLR
Hg19::chr5:55529115..55529168,-p2@ANKRD55
Hg19::chr5:58084081..58084123,+p8@RAB3C
Hg19::chr5:63801768..63801779,+p10@RGS7BP
Hg19::chr5:75379067..75379080,+p5@SV2C
Hg19::chr5:75379091..75379100,+p6@SV2C
Hg19::chr5:75379172..75379184,+p3@SV2C
Hg19::chr5:75379186..75379220,+p1@SV2C
Hg19::chr5:75379224..75379243,+p2@SV2C
Hg19::chr5:75380024..75380050,+p@chr5:75380024..75380050
+
Hg19::chr5:7782283..7782287,+p8@ADCY2
Hg19::chr5:79866054..79866115,-p1@ANKRD34B
Hg19::chr5:79866189..79866202,+p@chr5:79866189..79866202
+
Hg19::chr6:110299481..110299491,+p2@GPR6
Hg19::chr6:110299501..110299523,+p1@GPR6
Hg19::chr6:12716886..12716892,+p18@PHACTR1
Hg19::chr6:12716949..12716960,+p12@PHACTR1
Hg19::chr6:12716992..12717005,+p3@PHACTR1
Hg19::chr6:12890045..12890049,+p@chr6:12890045..12890049
+
Hg19::chr6:144904093..144904106,+p27@UTRN
Hg19::chr6:144904163..144904195,+p21@UTRN
Hg19::chr6:145132414..145132428,+p@chr6:145132414..145132428
+
Hg19::chr6:145132463..145132474,+p@chr6:145132463..145132474
+
Hg19::chr6:145132482..145132485,+p@chr6:145132482..145132485
+
Hg19::chr6:145132530..145132545,+p@chr6:145132530..145132545
+
Hg19::chr6:152793125..152793140,-p25@SYNE1
Hg19::chr6:15586212..15586232,-p2@DTNBP1
Hg19::chr6:166068741..166068746,-p@chr6:166068741..166068746
-
Hg19::chr6:166068792..166068836,-p@chr6:166068792..166068836
-
Hg19::chr6:166075754..166075776,-p2@PDE10A
Hg19::chr6:166076645..166076657,-p@chr6:166076645..166076657
-
Hg19::chr6:166076665..166076683,-p@chr6:166076665..166076683
-
Hg19::chr6:167276033..167276044,-p8@RPS6KA2
Hg19::chr6:19877308..19877326,-p@chr6:19877308..19877326
-
Hg19::chr6:29596131..29596154,-p13@GABBR1
Hg19::chr6:36743426..36743433,-p@chr6:36743426..36743433
-
Hg19::chr6:36807731..36807742,-p6@CPNE5
Hg19::chr6:36807762..36807812,-p1@CPNE5
Hg19::chr6:80472250..80472261,+p@chr6:80472250..80472261
+
Hg19::chr7:106710065..106710079,+p9@PRKAR2B
Hg19::chr7:111424008..111424024,-p@chr7:111424008..111424024
-
Hg19::chr7:111424462..111424496,-p3@DOCK4
Hg19::chr7:111424506..111424518,-p5@DOCK4
Hg19::chr7:111424575..111424587,-p9@DOCK4
Hg19::chr7:111424658..111424676,-p8@DOCK4
Hg19::chr7:131761558..131761590,-p@chr7:131761558..131761590
-
Hg19::chr7:14942334..14942341,-p9@DGKB
Hg19::chr7:14942355..14942362,-p10@DGKB
Hg19::chr7:14942368..14942382,-p2@DGKB
Hg19::chr7:14942523..14942538,-p5@DGKB
Hg19::chr7:14943271..14943288,-p3@DGKB
Hg19::chr7:154863236..154863258,-p2@LOC100128264
Hg19::chr7:22382758..22382765,-p@chr7:22382758..22382765
-
Hg19::chr7:22382780..22382797,-p@chr7:22382780..22382797
-
Hg19::chr7:24530137..24530142,+p@chr7:24530137..24530142
+
Hg19::chr7:28220631..28220649,-p6@JAZF1
Hg19::chr7:29218060..29218067,-p@chr7:29218060..29218067
-
Hg19::chr7:29845765..29845799,+p15@WIPF3
Hg19::chr7:29846088..29846091,+p20@WIPF3
Hg19::chr7:36561872..36561890,-p@chr7:36561872..36561890
-
Hg19::chr7:64348740..64348753,+p@chr7:64348740..64348753
+
Hg19::chr7:67237110..67237117,+p@chr7:67237110..67237117
+
Hg19::chr7:67899920..67899958,-p@chr7:67899920..67899958
-
Hg19::chr7:96635448..96635470,+p5@DLX6
Hg19::chr7:96635665..96635685,+p6@DLX6
Hg19::chr7:97361361..97361372,+p3@TAC1
Hg19::chr7:97361381..97361386,+p5@TAC1
Hg19::chr7:97361388..97361405,+p1@TAC1
Hg19::chr7:97361411..97361420,+p4@TAC1
Hg19::chr8:105715915..105715926,+p1@ENST00000518180
Hg19::chr8:110704014..110704028,-p16@SYBU
Hg19::chr8:115354253..115354290,+p@chr8:115354253..115354290
+
Hg19::chr8:14262412..14262423,+p@chr8:14262412..14262423
+
Hg19::chr8:145559009..145559027,+p@chr8:145559009..145559027
+
Hg19::chr8:19799565..19799589,-p@chr8:19799565..19799589
-
Hg19::chr8:21914538..21914547,+p33@EPB49
Hg19::chr8:22853345..22853366,+p15@RHOBTB2
Hg19::chr8:22853393..22853404,+p@chr8:22853393..22853404
+
Hg19::chr8:25281776..25281779,-p1@GNRH1
Hg19::chr8:50823174..50823197,+p4@SNTG1
Hg19::chr8:50823200..50823219,+p5@SNTG1
Hg19::chr8:54164109..54164137,-p3@OPRK1
Hg19::chr8:57353676..57353688,-p@chr8:57353676..57353688
-
Hg19::chr8:75564025..75564036,+p@chr8:75564025..75564036
+
Hg19::chr8:91248240..91248267,+p@chr8:91248240..91248267
+
Hg19::chr9:114176816..114176895,-p@chr9:114176816..114176895
-
Hg19::chr9:124534429..124534447,+p@chr9:124534429..124534447
+
Hg19::chr9:124723080..124723127,-p@chr9:124723080..124723127
-
Hg19::chr9:139717847..139717869,+p8@C9orf86
Hg19::chr9:82190674..82190716,+p25@TLE4
Hg19::chr9:85575924..85575932,+p@chr9:85575924..85575932
+
Hg19::chr9:88059291..88059305,-p@chr9:88059291..88059305
-
Hg19::chr9:95571188..95571220,+p2@ANKRD19P
Hg19::chrX:102663083..102663098,+p@chrX:102663083..102663098
+
Hg19::chrX:117106863..117106889,-p6@KLHL13
Hg19::chrX:117106941..117106952,-p14@KLHL13
Hg19::chrX:117107728..117107746,-p11@KLHL13
Hg19::chrX:136116150..136116160,-p@chrX:136116150..136116160
-
Hg19::chrX:13835472..13835483,-p10@GPM6B
Hg19::chrX:37765126..37765147,+p4@ENST00000449263
Hg19::chrX:37765754..37765765,+p11@ENST00000449263
Hg19::chrX:45984754..45984763,+p@chrX:45984754..45984763
+
Hg19::chrX:47479381..47479395,-p5@SYN1
Hg19::chrX:63029135..63029150,-p@chrX:63029135..63029150
-
Hg19::chrX:63029175..63029186,-p@chrX:63029175..63029186
-
Hg19::chrX:71288997..71289038,+p@chrX:71288997..71289038
+
Hg19::chrX:82763874..82763884,+p@chrX:82763874..82763884
+


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

p.valueFDRnGenesnPathwayName
2.41123012480639e-073.81577167250611e-059177Calcium signaling pathway (KEGG):04020
8.37499370646321e-060.0006626713770239019272Neuroactive ligand-receptor interaction (KEGG):04080
0.0003953454470092610.0166835778637908470Long-term potentiation (KEGG):04720
3.10848837485171e-060.000327945523546855421Nicotine Activity on Dopaminergic Neurons (Wikipathways):WP1602
7.58860170594162e-060.000662671377023901695G Protein Signaling Pathways (Wikipathways):WP35
6.717233251714e-078.50401729666993e-0510260GPCRs, Class A Rhodopsin-like (Wikipathways):WP455
9.65314524297171e-050.006110440938801096149Calcium Regulation in the Cardiac Cell (Wikipathways):WP536
0.000565544296617110.0210582082210959333Monoamine GPCRs (Wikipathways):WP58
0.0005159769730355680.0204133389957196332Hypothetical Network for Drug Addiction (Wikipathways):WP666
0.0001107693573824940.006374273020283527220Signalling by NGF (Reactome):REACT_11061
7.14589340250239e-122.26167526189201e-091080Opioid Signalling (Reactome):REACT_15295
1.06123177149021e-126.717597113533e-1014197Synaptic Transmission (Reactome):REACT_13685
5.94537866889469e-091.25447489913678e-0621932Signaling by GPCR (Reactome):REACT_14797
0.0003865008409158540.01668357786379085125Integration of energy metabolism (Reactome):REACT_1505
0.0003453517518156840.01668357786379087265Axon guidance (Reactome):REACT_18266
1.58272569655283e-050.0011131837399088314733{ARRB2,743} (Static Module):NA
0.0003457175979444880.0166835778637908328{DLG4,28} (Static Module):NA



Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0044459plasma membrane part3.49188062225331e-18
GO:0007154cell communication4.04548537112757e-17
GO:0005886plasma membrane8.5567689147832e-14
GO:0007165signal transduction2.59847700141666e-13
GO:0003008system process4.3402915108456e-11
GO:0016020membrane8.90853086964345e-11
GO:0044425membrane part3.81448855800484e-10
GO:0007186G-protein coupled receptor protein signaling pathway1.02868011979716e-09
GO:0032501multicellular organismal process1.66342895118553e-09
GO:0007268synaptic transmission5.79980580672754e-09
GO:0007166cell surface receptor linked signal transduction5.93019139387576e-09
GO:0007267cell-cell signaling1.67565323444307e-08
GO:0019226transmission of nerve impulse2.19295186582387e-08
GO:0030054cell junction4.68740365129647e-08
GO:0050877neurological system process4.33492372069729e-07
GO:0044464cell part4.90837209239714e-07
GO:0003779actin binding5.09375024471842e-07
GO:0008092cytoskeletal protein binding2.6959682107413e-06
GO:0044456synapse part8.15172157455421e-06
GO:0007242intracellular signaling cascade1.24271416266784e-05
GO:0007187G-protein signaling, coupled to cyclic nucleotide second messenger1.30237694122029e-05
GO:0019935cyclic-nucleotide-mediated signaling1.58486766550519e-05
GO:0005887integral to plasma membrane1.58486766550519e-05
GO:0007212dopamine receptor signaling pathway1.74726547105737e-05
GO:0031226intrinsic to plasma membrane1.74726547105737e-05
GO:0007188G-protein signaling, coupled to cAMP nucleotide second messenger2.76200365291171e-05
GO:0019933cAMP-mediated signaling3.27512077703987e-05
GO:0045211postsynaptic membrane5.01933103440985e-05
GO:0016021integral to membrane5.46694283904356e-05
GO:0031224intrinsic to membrane6.29194605761999e-05
GO:0007399nervous system development7.68407249719279e-05
GO:0005515protein binding9.72833575581948e-05
GO:0022843voltage-gated cation channel activity0.000149641818533287
GO:0065007biological regulation0.000166597933750868
GO:0019932second-messenger-mediated signaling0.000203075461600173
GO:0005737cytoplasm0.000267722435984773
GO:0015629actin cytoskeleton0.000395039160074976
GO:0045761regulation of adenylate cyclase activity0.000439088167767711
GO:0051339regulation of lyase activity0.000459754940102881
GO:0031279regulation of cyclase activity0.000459754940102881
GO:0031420alkali metal ion binding0.000471349516131385
GO:0005856cytoskeleton0.000607042752531664
GO:0005261cation channel activity0.000607042752531664
GO:0005244voltage-gated ion channel activity0.000607042752531664
GO:0022832voltage-gated channel activity0.000607042752531664
GO:0014075response to amine stimulus0.00173787002255221
GO:0007191dopamine receptor, adenylate cyclase activating pathway0.00173787002255221
GO:0001975response to amphetamine0.00173787002255221
GO:0060158dopamine receptor, phospholipase C activating pathway0.00173787002255221
GO:0007190adenylate cyclase activation0.00173787002255221
GO:0046873metal ion transmembrane transporter activity0.00194411017388452
GO:0022836gated channel activity0.0020870406367725
GO:0004888transmembrane receptor activity0.00216516295425679
GO:0000267cell fraction0.00222035257364126
GO:0051349positive regulation of lyase activity0.00222035257364126
GO:0045762positive regulation of adenylate cyclase activity0.00222035257364126
GO:0031281positive regulation of cyclase activity0.00222035257364126
GO:0004930G-protein coupled receptor activity0.00289822552904634
GO:0005216ion channel activity0.00362020148090754
GO:0030001metal ion transport0.00362020148090754
GO:0005624membrane fraction0.00362020148090754
GO:0022838substrate specific channel activity0.00381972362786136
GO:0022803passive transmembrane transporter activity0.00410357300300284
GO:0015267channel activity0.00410357300300284
GO:0007275multicellular organismal development0.00434198691456024
GO:0016323basolateral plasma membrane0.00447051702695427
GO:0008277regulation of G-protein coupled receptor protein signaling pathway0.0050521276938427
GO:0007189G-protein signaling, adenylate cyclase activating pathway0.00540277347838805
GO:0008324cation transmembrane transporter activity0.00544484618504145
GO:0031402sodium ion binding0.00670691125571262
GO:0007015actin filament organization0.00702457903406063
GO:0007626locomotory behavior0.00819644372807439
GO:0015672monovalent inorganic cation transport0.0105666473425826
GO:0004385guanylate kinase activity0.0105666473425826
GO:0007610behavior0.0108357785691984
GO:0050789regulation of biological process0.0118907848867096
GO:0007618mating0.0121168434406504
GO:0006874cellular calcium ion homeostasis0.0121168434406504
GO:0055074calcium ion homeostasis0.0121168434406504
GO:0031410cytoplasmic vesicle0.0130490629795324
GO:0031982vesicle0.0139686248959474
GO:0048731system development0.0139686248959474
GO:0006875cellular metal ion homeostasis0.0139686248959474
GO:0055065metal ion homeostasis0.0139686248959474
GO:0006812cation transport0.0139686248959474
GO:0044424intracellular part0.0139686248959474
GO:0001584rhodopsin-like receptor activity0.0141324595596603
GO:0001619lysosphingolipid and lysophosphatidic acid receptor activity0.0144333995049695
GO:0045125bioactive lipid receptor activity0.0144333995049695
GO:0005272sodium channel activity0.0145830957192617
GO:0048519negative regulation of biological process0.0151698245707305
GO:0012505endomembrane system0.0158685945374056
GO:0004871signal transducer activity0.0161124266880714
GO:0060089molecular transducer activity0.0161124266880714
GO:0048856anatomical structure development0.0186329921249899
GO:0032502developmental process0.019210161674216
GO:0007417central nervous system development0.0194812928167398
GO:0030594neurotransmitter receptor activity0.0200812526799002
GO:0008227amine receptor activity0.020770971325414
GO:0005902microvillus0.020770971325414
GO:0007193G-protein signaling, adenylate cyclase inhibiting pathway0.020770971325414
GO:0001518voltage-gated sodium channel complex0.020770971325414
GO:0015459potassium channel regulator activity0.020770971325414
GO:0042165neurotransmitter binding0.0209550385956687
GO:0007204elevation of cytosolic calcium ion concentration0.021685931503989
GO:0051480cytosolic calcium ion homeostasis0.021685931503989
GO:0004952dopamine receptor activity0.021685931503989
GO:0007270nerve-nerve synaptic transmission0.021685931503989
GO:0006171cAMP biosynthetic process0.021685931503989
GO:0035240dopamine binding0.021685931503989
GO:0048666neuron development0.0242315767376222
GO:0007600sensory perception0.0242315767376222
GO:0043085positive regulation of catalytic activity0.0242315767376222
GO:0008021synaptic vesicle0.0242315767376222
GO:0065008regulation of biological quality0.0242315767376222
GO:0048523negative regulation of cellular process0.0271158064050832
GO:0005248voltage-gated sodium channel activity0.0271158064050832
GO:0046058cAMP metabolic process0.0271158064050832
GO:0001505regulation of neurotransmitter levels0.0271373305496601
GO:0015075ion transmembrane transporter activity0.0280850160916833
GO:0019888protein phosphatase regulator activity0.0280850160916833
GO:0005249voltage-gated potassium channel activity0.0280850160916833
GO:0043005neuron projection0.0280850160916833
GO:0019208phosphatase regulator activity0.0280850160916833
GO:0032230positive regulation of synaptic transmission, GABAergic0.0280850160916833
GO:0031528microvillus membrane0.0280850160916833
GO:0004925prolactin receptor activity0.0280850160916833
GO:0005183luteinizing hormone-releasing factor activity0.0280850160916833
GO:0042976activation of JAK protein0.0280850160916833
GO:0030858positive regulation of epithelial cell differentiation0.0280850160916833
GO:0043522leucine zipper domain binding0.0280850160916833
GO:0051370ZASP binding0.0280850160916833
GO:0033781cholesterol 24-hydroxylase activity0.0280850160916833
GO:0005280hydrogen:amino acid symporter activity0.0280850160916833
GO:0008473ornithine cyclodeaminase activity0.0280850160916833
GO:0051374FATZ 1 binding0.0280850160916833
GO:0042977tyrosine phosphorylation of JAK2 protein0.0280850160916833
GO:0003955NAD(P)H dehydrogenase (quinone) activity0.0280850160916833
GO:0001711endodermal cell fate commitment0.0280850160916833
GO:0015495gamma-aminobutyric acid:hydrogen symporter activity0.0280850160916833
GO:0001590dopamine D1 receptor activity0.0280850160916833
GO:0042641actomyosin0.0280850160916833
GO:0042978ornithine decarboxylase activator activity0.0280850160916833
GO:0006814sodium ion transport0.0282606040044011
GO:0030551cyclic nucleotide binding0.0282606040044011
GO:0007214gamma-aminobutyric acid signaling pathway0.0303356384941372
GO:0007200G-protein signaling, coupled to IP3 second messenger (phospholipase C activating)0.0306603695325305
GO:0030005cellular di-, tri-valent inorganic cation homeostasis0.031791389468235
GO:0055066di-, tri-valent inorganic cation homeostasis0.0334786219543023
GO:0035258steroid hormone receptor binding0.0391560258945665
GO:0042995cell projection0.0420518778812363
GO:0042133neurotransmitter metabolic process0.0420518778812363
GO:0051179localization0.0420518778812363
GO:0030003cellular cation homeostasis0.0420518778812363
GO:0030326embryonic limb morphogenesis0.0420518778812363
GO:0035113embryonic appendage morphogenesis0.0420518778812363
GO:0004864protein phosphatase inhibitor activity0.0420518778812363
GO:0055080cation homeostasis0.0420518778812363
GO:0009968negative regulation of signal transduction0.0420518778812363
GO:0048858cell projection morphogenesis0.0420518778812363
GO:0032990cell part morphogenesis0.0420518778812363
GO:0030030cell projection organization and biogenesis0.0420518778812363
GO:0019212phosphatase inhibitor activity0.0420518778812363
GO:0014821phasic smooth muscle contraction0.0420518778812363
GO:0021826substrate-independent telencephalic tangential migration0.0420518778812363
GO:0006540glutamate decarboxylation to succinate0.0420518778812363
GO:0051373FATZ binding0.0420518778812363
GO:0021892cerebral cortex GABAergic interneuron differentiation0.0420518778812363
GO:000550211-cis retinal binding0.0420518778812363
GO:0030432peristalsis0.0420518778812363
GO:0021843substrate-independent telencephalic tangential interneuron migration0.0420518778812363
GO:0021894cerebral cortex GABAergic interneuron development0.0420518778812363
GO:0005042netrin receptor activity0.0420518778812363
GO:0007195dopamine receptor, adenylate cyclase inhibiting pathway0.0420518778812363
GO:0006105succinate metabolic process0.0420518778812363
GO:0021830interneuron migration from the subpallium to the cortex0.0420518778812363
GO:0001706endoderm formation0.0420518778812363
GO:0004351glutamate decarboxylase activity0.0420518778812363
GO:0016013syntrophin complex0.0420518778812363
GO:0004987kappa-opioid receptor activity0.0420518778812363
GO:0001973adenosine receptor signaling pathway0.0420518778812363
GO:0032331negative regulation of chondrocyte differentiation0.0420518778812363
GO:0015816glycine transport0.0420518778812363
GO:0001965G-protein alpha-subunit binding0.0420518778812363
GO:0021853cerebral cortex GABAergic interneuron migration0.0420518778812363
GO:0045294alpha-catenin binding0.0420518778812363
GO:0060134prepulse inhibition0.0420518778812363
GO:0030275LRR domain binding0.0420518778812363
GO:0001611A2A adenosine receptor activity, G-protein coupled0.0420518778812363
GO:0007625grooming behavior0.0420518778812363
GO:0001588dopamine D1 receptor-like receptor activity0.0420518778812363
GO:0030182neuron differentiation0.0420683792178519
GO:0016247channel regulator activity0.0435193681539735
GO:0005267potassium channel activity0.0437236845237935
GO:0048736appendage development0.044181488793002
GO:0060173limb development0.044181488793002
GO:0005891voltage-gated calcium channel complex0.044181488793002
GO:0035107appendage morphogenesis0.044181488793002
GO:0035108limb morphogenesis0.044181488793002
GO:0007631feeding behavior0.044181488793002
GO:0000902cell morphogenesis0.044181488793002
GO:0032989cellular structure morphogenesis0.044181488793002
GO:0005622intracellular0.0446075279686585
GO:0042592homeostatic process0.0446075279686585
GO:0019201nucleotide kinase activity0.0450806908365488
GO:0030425dendrite0.0450806908365488
GO:0050767regulation of neurogenesis0.0450806908365488
GO:0030136clathrin-coated vesicle0.0455252296881115
GO:0016023cytoplasmic membrane-bound vesicle0.0465772260308999
GO:0022891substrate-specific transmembrane transporter activity0.0468493848667038
GO:0050953sensory perception of light stimulus0.0468493848667038
GO:0007601visual perception0.0468493848667038
GO:0009190cyclic nucleotide biosynthetic process0.0482006073658273
GO:0031988membrane-bound vesicle0.0482006073658273
GO:0005262calcium channel activity0.0483452464761841



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
telencephalon9.78e-8634
regional part of forebrain4.91e-8541
forebrain4.91e-8541
anterior neural tube4.91e-8541
future forebrain4.91e-8541
cerebral hemisphere3.89e-8332
regional part of nervous system8.89e-8353
regional part of brain8.89e-8353
neural tube3.56e-7856
neural rod3.56e-7856
future spinal cord3.56e-7856
neural keel3.56e-7856
brain grey matter5.11e-7834
gray matter5.11e-7834
regional part of telencephalon2.81e-7532
brain9.79e-6868
future brain9.79e-6868
central nervous system8.60e-6181
pre-chordal neural plate3.60e-5661
nervous system2.27e-5489
neural plate3.30e-5282
presumptive neural plate3.30e-5282
regional part of cerebral cortex5.02e-5222
neurectoderm1.37e-4986
neocortex3.04e-4920
cerebral cortex1.03e-4525
pallium1.03e-4525
adult organism5.21e-43114
ecto-epithelium2.89e-40104
basal ganglion3.08e-369
nuclear complex of neuraxis3.08e-369
aggregate regional part of brain3.08e-369
collection of basal ganglia3.08e-369
cerebral subcortex3.08e-369
neural nucleus7.39e-369
nucleus of brain7.39e-369
telencephalic nucleus1.15e-347
structure with developmental contribution from neural crest2.03e-33132
corpus striatum8.37e-284
striatum8.37e-284
ventral part of telencephalon8.37e-284
future corpus striatum8.37e-284
gyrus1.47e-266
ectoderm-derived structure2.06e-26171
ectoderm2.06e-26171
presumptive ectoderm2.06e-26171
caudate-putamen2.37e-213
dorsal striatum2.37e-213
organ system subdivision9.69e-21223
tube1.15e-19192
temporal lobe3.52e-156
caudate nucleus8.43e-152
future caudate nucleus8.43e-152
anatomical conduit9.48e-15240
globus pallidus1.65e-142
pallidum1.65e-142
middle temporal gyrus6.62e-142
limbic system1.40e-125
organ part1.86e-12218
parietal lobe3.69e-125
occipital lobe5.41e-125
epithelium1.75e-10306
anatomical cluster2.16e-10373
cell layer2.48e-10309
brainstem7.54e-106
multi-tissue structure8.71e-10342
frontal cortex1.44e-093
pons3.38e-093
putamen2.70e-081
nucleus accumbens3.32e-081
ventral striatum3.32e-081
insula4.35e-081
olfactory region5.70e-081
primary subdivision of skull5.70e-081
cranium5.70e-081
neurocranium5.70e-081
chondrocranium5.70e-081
cartilaginous neurocranium5.70e-081
head paraxial mesoderm5.70e-081
paracentral gyrus9.10e-081
postcentral gyrus9.72e-081
occipital pole1.26e-071
pole of cerebral hemisphere1.26e-071
corpus callosum1.87e-071
central nervous system cell part cluster1.87e-071
axon tract1.87e-071
intercerebral commissure1.87e-071
dorsal telencephalic commissure1.87e-071
brain white matter1.87e-071
brain commissure1.87e-071
white matter1.87e-071
nervous system commissure1.87e-071
cerebral hemisphere white matter1.87e-071


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
SUZ12#23512383.579698636504492.74779101846186e-113.21722585400379e-09



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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