FFCP PHASE1:Mm9::chr1:107560446..107560497,+: Difference between revisions
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|id=chr1:107560446..107560497,+ | |id=chr1:107560446..107560497,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!1.71e-11!99;UBERON:0002020!1.80e-10!34;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0007811!6.18e-09!86;UBERON:0002616!1.00e-08!49;UBERON:0002791!1.58e-08!29;UBERON:0003528!1.58e-08!29;UBERON:0001893!1.58e-08!29;UBERON:0001017!2.73e-08!73;UBERON:0005743!2.73e-08!73;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000033!6.56e-08!63;UBERON:0000073!1.80e-07!75;UBERON:0001016!1.80e-07!75;UBERON:0003080!5.05e-07!40;UBERON:0000153!6.10e-07!94;UBERON:0002780!9.89e-07!39;UBERON:0001890!9.89e-07!39;UBERON:0006240!9.89e-07!39 | |ontology_enrichment_uberon=UBERON:0000064!1.71e-11!99;UBERON:0002020!1.80e-10!34;UBERON:0001049!1.56e-09!52;UBERON:0005068!1.56e-09!52;UBERON:0006241!1.56e-09!52;UBERON:0007135!1.56e-09!52;UBERON:0000955!3.54e-09!50;UBERON:0006238!3.54e-09!50;UBERON:0007811!6.18e-09!86;UBERON:0002616!1.00e-08!49;UBERON:0002791!1.58e-08!29;UBERON:0003528!1.58e-08!29;UBERON:0001893!1.58e-08!29;UBERON:0001017!2.73e-08!73;UBERON:0005743!2.73e-08!73;UBERON:0002021!6.52e-08!10;UBERON:0000411!6.52e-08!10;UBERON:0001950!6.52e-08!10;UBERON:0000033!6.56e-08!63;UBERON:0000073!1.80e-07!75;UBERON:0001016!1.80e-07!75;UBERON:0003080!5.05e-07!40;UBERON:0000153!6.10e-07!94;UBERON:0002780!9.89e-07!39;UBERON:0001890!9.89e-07!39;UBERON:0006240!9.89e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-10,54;UBERON:0002020,1.80e-10,34;UBERON:0001049,1.56e-09,52;UBERON:0005068,1.56e-09,52;UBERON:0006241,1.56e-09,52;UBERON:0007135,1.56e-09,52;UBERON:0010371,3.66e-09,73;UBERON:0011216,6.08e-09,194;UBERON:0003528,1.58e-08,29;UBERON:0002791,1.58e-08,29;UBERON:0001893,1.58e-08,29;UBERON:0001017,2.73e-08,73;UBERON:0002021,6.52e-08,10;UBERON:0000411,6.52e-08,10;UBERON:0001950,6.52e-08,10;UBERON:0000955,7.11e-08,47;UBERON:0006238,7.11e-08,47;UBERON:0004121,8.74e-08,95;UBERON:0000924,8.74e-08,95;UBERON:0006601,8.74e-08,95;UBERON:0002346,1.26e-07,64;UBERON:0003075,1.26e-07,64;UBERON:0007284,1.26e-07,64;UBERON:0001016,1.80e-07,75;UBERON:0002616,1.90e-07,46;UBERON:0003080,5.05e-07,40;UBERON:0002780,9.89e-07,39;UBERON:0001890,9.89e-07,39;UBERON:0006240,9.89e-07,39 | |||
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| ||
|short_description=p1@2310035C23Rik | |short_description=p1@2310035C23Rik | ||
}} | }} |
Revision as of 05:40, 14 November 2012
Short description: | p1@2310035C23Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2310035C23Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:3219 |
Association with transcript: | 8bp_to_ENSMUST00000039173, ENSMUST00000086721, NM_029349, NM_173187, uc007cgi.2, uc007cgj.2, uc007cgk.2, uc007cgl.2, uc007cgm.2_5end |
EntrezGene: | 2310035C23Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.44e-10 | 54 |
gray matter | 1.80e-10 | 34 |
neural tube | 1.56e-09 | 52 |
neural rod | 1.56e-09 | 52 |
future spinal cord | 1.56e-09 | 52 |
neural keel | 1.56e-09 | 52 |
ecto-epithelium | 3.66e-09 | 73 |
organ system subdivision | 6.08e-09 | 194 |
brain grey matter | 1.58e-08 | 29 |
regional part of telencephalon | 1.58e-08 | 29 |
telencephalon | 1.58e-08 | 29 |
central nervous system | 2.73e-08 | 73 |
occipital lobe | 6.52e-08 | 10 |
visual cortex | 6.52e-08 | 10 |
neocortex | 6.52e-08 | 10 |
brain | 7.11e-08 | 47 |
future brain | 7.11e-08 | 47 |
ectoderm-derived structure | 8.74e-08 | 95 |
ectoderm | 8.74e-08 | 95 |
presumptive ectoderm | 8.74e-08 | 95 |
neurectoderm | 1.26e-07 | 64 |
neural plate | 1.26e-07 | 64 |
presumptive neural plate | 1.26e-07 | 64 |
nervous system | 1.80e-07 | 75 |
regional part of brain | 1.90e-07 | 46 |
anterior neural tube | 5.05e-07 | 40 |
regional part of forebrain | 9.89e-07 | 39 |
forebrain | 9.89e-07 | 39 |
future forebrain | 9.89e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.